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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TSPAN7 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
184.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
563.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
449.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
433.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
423.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
410.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
384.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
360.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
357.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
353.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
332.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
303.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
281.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
277.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
271.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
264.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
264.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
248.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
247.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
243.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
239.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
230.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
216.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
206.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
205.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
203.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
197.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
194.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
192.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
191.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
185.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
183.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
177.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
174.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
158.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
157.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
153.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
147.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
142.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
138.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
135.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
132.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
129.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
105.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
104.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
104.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
99.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
95.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
93.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
91.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
76.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
71.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
70.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
69.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
58.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
52.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
38.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
25.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
22.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
20.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
14.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
1.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
1.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TSPAN7 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
45.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
450.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
296.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
290.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
244.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
224.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
210.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
206.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
188.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
181.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
170.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
166.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
156.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
154.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
152.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
151.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
139.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
136.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
129.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
129.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
126.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
124.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
123.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
122.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
121.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
120.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
118.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
116.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
110.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
109.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
108.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
106.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
105.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
105.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
104.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
104.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
102.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
102.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
102.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
101.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
100.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
99.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
98.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
98.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
98.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
96.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
96.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
96.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
95.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
94.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
94.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
94.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
94.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
93.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
90.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
89.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
87.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
87.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
86.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
86.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
86.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
85.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
85.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
85.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
84.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
82.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
81.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
81.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
80.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
80.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
80.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
79.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
79.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
79.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
79.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
79.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
78.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
77.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
76.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
76.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
76.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
75.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
75.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
75.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
75.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
75.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
74.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
73.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
73.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
72.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
72.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
71.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
71.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
71.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
71.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
71.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
70.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
70.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
69.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
68.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
68.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
68.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
68.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
67.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
66.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
66.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
66.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
66.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
66.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
66.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
66.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
66.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
65.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
65.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
64.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
64.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
64.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
64.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
64.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
64.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
64.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
63.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
63.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
63.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
63.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
63.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
63.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
63.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
63.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
63.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
62.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
62.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
62.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
61.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
61.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
61.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
61.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
61.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
60.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
60.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
60.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
60.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
60.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
59.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
59.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
59.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
58.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
58.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
58.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
57.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
56.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
56.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
56.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
55.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
55.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
55.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
55.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
54.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
54.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
54.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
54.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
54.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
54.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
54.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
54.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
54.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
53.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
53.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
53.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
53.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
53.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
53.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
53.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
53.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
52.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
52.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
52.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
52.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
51.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
51.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
51.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
51.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
51.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
50.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
50.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
50.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
50.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
49.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
49.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
49.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
49.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
49.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
49.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
48.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
48.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
48.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
48.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
48.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
47.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
47.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
47.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
47.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
47.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
46.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
46.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
46.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
46.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
45.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
45.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
45.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
44.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
44.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
44.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
44.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
44.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
44.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
43.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
43.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
43.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
43.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
43.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
43.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
43.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
42.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
42.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
42.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
42.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
42.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
42.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
41.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
41.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
40.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
40.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
40.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
40.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
40.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
40.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
40.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
40.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
39.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
39.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
39.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
39.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
39.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
39.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
38.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
38.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
37.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
37.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
37.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
36.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
36.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
36.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
36.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
36.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
36.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
36.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
35.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
35.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
35.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
35.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
35.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
35.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
35.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
35.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
35.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
34.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
34.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
34.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
34.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
33.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
33.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
33.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
33.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
33.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
33.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
32.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
32.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
32.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
32.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
32.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
32.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
31.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
31.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
31.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
31.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
31.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
30.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
30.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
30.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
30.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
30.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
30.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
30.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
30.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
30.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
29.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
29.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
29.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
29.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
29.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
29.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
29.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
29.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
28.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
28.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
28.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
28.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
28.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
28.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
28.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
28.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
27.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
27.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
27.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
27.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
27.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
27.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
27.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
27.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
26.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
26.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
26.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
26.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
26.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
26.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
26.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
26.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
25.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
25.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
25.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
25.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
25.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
25.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
24.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
24.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
24.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
24.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
24.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
24.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
24.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
24.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
24.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
23.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
23.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
23.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
23.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
22.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
22.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
22.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
22.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
22.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
22.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
22.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
21.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
21.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
21.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
21.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
21.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
21.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
20.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
20.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
20.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
20.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
20.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
20.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
20.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
20.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
20.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
20.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
20.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
20.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
20.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
20.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
20.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
19.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
19.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
19.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
19.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
19.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
19.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
18.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
18.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
18.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
18.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
18.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
18.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
18.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
18.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
18.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
17.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
17.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
17.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
17.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
17.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
17.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
16.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
16.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
16.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
16.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
15.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
15.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
15.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
15.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
15.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
14.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
14.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
14.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
14.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
14.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
14.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
14.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
14.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
14.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
14.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
14.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
14.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
13.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
13.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
13.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
13.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
13.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
13.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
13.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
13.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
12.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
12.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
12.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
11.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
11.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
11.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
11.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
11.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
11.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
10.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
10.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
10.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
10.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
10.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
10.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
9.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
9.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
9.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
9.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
8.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
8.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
8.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
8.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
8.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
8.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
8.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
7.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
7.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
7.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
7.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
7.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
7.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
7.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
6.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
6.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
6.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
6.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
6.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
6.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
5.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
5.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
5.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
5.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
4.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
4.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
4.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
4.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
3.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
3.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
3.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
3.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
3.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
3.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
2.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
2.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
2.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
2.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
2.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
2.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
2.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
2.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
1.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
1.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
1.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
1.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
1.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
1.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
1.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
0.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
0.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
0.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
0.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
0.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
0.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TSPAN7 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
176.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
102.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
100.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
98.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
95.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
93.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
90.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
85.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
84.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
81.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
80.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
78.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
77.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
75.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
72.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
70.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
69.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
68.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
68.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
67.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
64.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
63.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
59.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
58.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
58.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
56.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
56.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
55.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
54.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
51.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
50.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
50.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
50.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
50.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
49.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
48.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
48.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
47.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
47.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
46.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
45.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
44.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
41.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
40.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
38.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
37.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
36.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
36.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
35.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
34.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
34.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
33.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
33.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
33.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
32.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
31.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
30.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
30.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
26.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
26.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
26.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
26.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
25.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
23.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
23.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
23.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
23.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
22.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
21.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
19.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
19.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
19.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
16.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
15.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
14.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
14.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
13.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
12.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
11.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
11.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
11.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
10.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
9.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
9.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
8.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
7.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
7.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
5.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
5.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
4.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
3.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
2.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
1.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
1.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
1.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
1.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
0.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TSPAN7 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
269.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
142.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
80.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
78.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
60.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
56.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
56.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
46.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
39.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
36.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
28.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
26.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
25.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
23.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
23.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
20.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
19.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
14.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
14.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
13.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
13.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
13.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
12.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
11.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
11.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
10.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
10.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
10.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
10.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
9.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
8.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
7.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
7.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
7.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
6.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
6.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
6.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
6.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
6.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
6.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
6.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
6.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
6.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
5.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
5.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
5.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
5.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
5.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
5.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
5.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
4.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
4.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
4.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
4.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
4.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
4.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
4.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
4.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
4.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
4.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
4.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
4.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
4.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
4.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
4.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
4.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
4.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
4.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
3.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
3.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
3.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
3.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
3.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
3.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
3.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
3.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
3.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
3.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
3.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
3.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
3.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
3.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
3.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
3.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
3.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
3.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
3.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
3.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
3.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
3.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
3.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
3.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
3.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
3.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
3.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
3.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
3.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
2.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
2.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
2.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
2.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
2.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
2.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
2.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
2.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
2.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
2.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
2.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
2.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
2.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
2.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
2.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
2.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
2.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
2.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
2.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
2.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
2.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
2.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
2.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
2.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
2.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
2.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
2.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
2.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
2.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
2.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
2.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
2.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
2.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
2.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
2.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
2.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
2.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
2.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
2.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
2.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
2.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
2.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
2.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
2.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
2.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
2.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
2.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
2.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
2.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
2.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
1.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
1.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
1.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
1.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
1.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
1.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
1.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
1.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
1.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
1.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
1.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
1.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
1.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
1.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
1.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
1.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
1.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
1.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
1.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
1.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
1.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
1.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
1.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
1.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
1.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
1.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
1.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
1.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
1.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
1.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
1.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
1.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
1.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
1.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
1.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
1.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
1.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
1.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
1.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
1.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
1.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
0.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
0.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
0.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
0.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
0.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
0.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
0.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
0.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
0.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
0.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
0.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
0.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
0.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
0.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
0.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
0.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
0.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
0.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
0.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078660003
Tumor
2.5
CPT0079180003
Tumor
2.1
CPT0065870003
Tumor
1.5
CPT0075720003
Tumor
1.5
CPT0089480003
Normal
1.2
CPT0026420001
Normal
1.1
CPT0014470001
Normal
1.1
CPT0007470001
Normal
1.1
CPT0000640003
Tumor
1.1
CPT0007870001
Normal
1.0
CPT0025920001
Normal
1.0
CPT0092740003
Normal
1.0
CPT0025350003
Tumor
1.0
CPT0086830003
Normal
0.9
CPT0023360001
Normal
0.9
CPT0079510001
Normal
0.9
CPT0086370003
Normal
0.8
CPT0014130001
Normal
0.8
CPT0092310003
Normal
0.8
CPT0088570001
Normal
0.8
CPT0000790001
Normal
0.8
CPT0006950001
Normal
0.8
CPT0088710001
Normal
0.8
CPT0078840001
Normal
0.8
CPT0001270001
Normal
0.7
CPT0092730003
Tumor
0.7
CPT0088920001
Normal
0.7
CPT0088640003
Normal
0.7
CPT0001550001
Normal
0.6
CPT0066430001
Normal
0.6
CPT0092800003
Normal
0.6
CPT0087050003
Normal
0.6
CPT0023710001
Normal
0.6
CPT0065690003
Tumor
0.6
CPT0063320003
Tumor
0.6
CPT0079480003
Tumor
0.6
CPT0001510001
Normal
0.5
CPT0000660001
Normal
0.5
CPT0001230001
Normal
0.5
CPT0065820001
Normal
0.5
CPT0025170003
Tumor
0.5
CPT0063330001
Normal
0.5
CPT0006730001
Normal
0.5
CPT0086890003
Normal
0.4
CPT0075170001
Normal
0.4
CPT0088780001
Normal
0.4
CPT0019160001
Normal
0.4
CPT0066520001
Normal
0.4
CPT0001190001
Normal
0.4
CPT0079000001
Normal
0.4
CPT0014350001
Normal
0.4
CPT0006900003
Tumor
0.4
CPT0079430001
Normal
0.3
CPT0088630003
Tumor
0.3
CPT0020020001
Normal
0.3
CPT0081620001
Normal
0.3
CPT0089020003
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0088760003
Tumor
0.3
CPT0088500001
Normal
0.3
CPT0079300001
Normal
0.3
CPT0088900003
Tumor
0.3
CPT0063640001
Normal
0.3
CPT0006530001
Normal
0.3
CPT0066480003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0089040001
Normal
0.2
CPT0087040003
Tumor
0.2
CPT0025060001
Normal
0.1
CPT0086970003
Normal
0.1
CPT0001350001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0002370001
Normal
0.1
CPT0077320001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0015810003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0010160003
Tumor
0.0
CPT0015910003
Tumor
0.0
CPT0078990003
Tumor
0.0
CPT0088970003
Tumor
0.0
CPT0077140001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0089460004
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0064400001
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0025580004
Tumor
-0.2
CPT0002350011
Tumor
-0.3
CPT0079230003
Tumor
-0.3
CPT0010170001
Normal
-0.3
CPT0012920003
Normal
-0.3
CPT0009080003
Normal
-0.3
CPT0010120001
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0065930003
Tumor
-0.4
CPT0001260009
Tumor
-0.4
CPT0065430003
Tumor
-0.4
CPT0075130003
Tumor
-0.4
CPT0025110003
Tumor
-0.4
CPT0001180009
Tumor
-0.4
CPT0001500009
Tumor
-0.4
CPT0020130001
Normal
-0.4
CPT0012290003
Normal
-0.5
CPT0001540009
Tumor
-0.5
CPT0092160003
Tumor
-0.5
CPT0007860003
Tumor
-0.5
CPT0012900004
Tumor
-0.5
CPT0012370003
Tumor
-0.5
CPT0019130003
Tumor
-0.5
CPT0086360003
Tumor
-0.5
CPT0010110003
Tumor
-0.5
CPT0020120003
Tumor
-0.5
CPT0006630003
Tumor
-0.5
CPT0009020003
Normal
-0.6
CPT0092290003
Tumor
-0.6
CPT0079380003
Tumor
-0.6
CPT0012080003
Tumor
-0.6
CPT0075570001
Normal
-0.6
CPT0065750003
Tumor
-0.6
CPT0001340003
Tumor
-0.6
CPT0092190003
Normal
-0.6
CPT0075560003
Tumor
-0.7
CPT0025880003
Tumor
-0.7
CPT0012090003
Normal
-0.7
CPT0012770003
Normal
-0.7
CPT0088480003
Tumor
-0.7
CPT0009000003
Tumor
-0.7
CPT0012280003
Tumor
-0.7
CPT0024680001
Normal
-0.7
CPT0013790003
Normal
-0.7
CPT0012640003
Normal
-0.7
CPT0065810003
Tumor
-0.7
CPT0014160003
Tumor
-0.8
CPT0025230003
Tumor
-0.8
CPT0088550004
Tumor
-0.8
CPT0064370003
Tumor
-0.8
CPT0078930003
Tumor
-0.8
CPT0018250001
Normal
-0.9
CPT0007320003
Tumor
-0.9
CPT0012570003
Normal
-0.9
CPT0085670003
Tumor
-1.0
CPT0026410003
Tumor
-1.0
CPT0086950003
Tumor
-1.1
CPT0017410003
Tumor
-1.1
CPT0011240003
Tumor
-1.1
CPT0077310003
Tumor
-1.2
CPT0069190001
Normal
-1.2
CPT0021240003
Tumor
-1.2
CPT0079410003
Tumor
-1.2
CPT0082010001
Normal
-1.2
CPT0009060003
Tumor
-1.3
CPT0081990003
Tumor
-1.3
CPT0079270003
Tumor
-1.3
CPT0077110003
Tumor
-1.3
CPT0015730003
Tumor
-1.3
CPT0086820003
Tumor
-1.4
CPT0012180003
Tumor
-1.5
CPT0063630003
Tumor
-1.5
CPT0088690003
Tumor
-1.6
CPT0012550003
Tumor
-1.7
CPT0014450004
Tumor
-1.8
CPT0069160003
Tumor
-1.8
CPT0017850003
Tumor
-1.9
CPT0002270011
Tumor
-2.0
CPT0025050003
Tumor
-2.0
CPT0078800003
Tumor
-2.0
CPT0081880003
Tumor
-2.1
CPT0012670003
Tumor
-2.1
CPT0024670003
Tumor
-2.1
CPT0011410003
Tumor
-2.1
CPT0023350003
Tumor
-2.4
CPT0076330003
Tumor
-2.6
CPT0084560003
Tumor
-2.9
CPT0069010001
Normal
-3.3
CPT0069000003
Tumor
-4.4
CPT0000780007
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.