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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC16A1 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
43.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
25.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
24.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
21.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
21.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
20.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
18.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
18.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
18.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
16.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
15.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
14.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
14.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
13.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
13.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
12.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
12.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
11.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
10.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
9.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
8.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
8.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
8.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
8.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
8.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
7.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
7.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
7.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
7.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
7.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
7.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
6.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
6.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
6.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
6.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
6.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
6.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
5.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
5.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
5.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
5.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
4.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
4.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
4.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
4.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
3.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
3.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
3.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
3.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
3.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
3.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
2.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
1.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
1.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
1.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
1.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
1.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
0.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC16A1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
281.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
149.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
122.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
97.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
92.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
88.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
85.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
84.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
81.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
77.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
76.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
76.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
75.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
74.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
74.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
74.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
73.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
72.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
72.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
72.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
68.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
65.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
64.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
63.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
63.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
62.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
61.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
61.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
60.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
59.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
58.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
58.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
56.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
55.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
55.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
55.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
55.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
54.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
54.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
54.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
54.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
53.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
53.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
53.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
53.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
52.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
52.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
52.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
52.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
52.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
51.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
51.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
51.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
51.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
50.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
50.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
50.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
50.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
50.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
50.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
50.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
49.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
49.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
47.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
47.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
46.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
46.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
46.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
46.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
46.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
46.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
46.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
45.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
45.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
45.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
45.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
44.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
44.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
44.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
44.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
44.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
44.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
44.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
44.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
44.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
43.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
43.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
43.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
43.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
43.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
43.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
42.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
42.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
42.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
42.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
42.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
42.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
42.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
41.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
41.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
41.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
41.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
41.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
41.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
41.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
41.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
41.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
40.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
40.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
40.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
40.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
39.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
39.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
39.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
39.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
39.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
39.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
39.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
39.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
39.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
39.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
39.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
39.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
39.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
39.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
38.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
38.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
37.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
37.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
37.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
37.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
37.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
37.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
37.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
37.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
36.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
36.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
36.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
36.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
36.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
36.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
36.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
36.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
36.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
36.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
36.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
35.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
35.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
35.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
35.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
35.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
35.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
35.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
35.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
35.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
35.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
35.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
34.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
34.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
34.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
34.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
34.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
34.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
34.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
34.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
34.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
33.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
33.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
33.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
33.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
33.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
32.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
32.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
32.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
32.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
32.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
32.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
32.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
32.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
32.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
32.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
32.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
32.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
32.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
32.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
32.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
32.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
31.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
31.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
31.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
31.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
31.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
31.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
31.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
31.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
31.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
31.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
31.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
31.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
31.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
31.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
31.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
30.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
30.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
30.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
30.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
30.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
30.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
30.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
30.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
30.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
30.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
30.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
29.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
29.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
29.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
29.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
29.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
29.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
29.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
29.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
29.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
29.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
29.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
29.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
29.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
29.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
29.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
29.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
29.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
29.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
29.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
28.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
28.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
28.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
28.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
28.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
28.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
28.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
28.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
28.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
28.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
28.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
28.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
28.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
28.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
28.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
28.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
28.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
27.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
27.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
27.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
27.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
27.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
27.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
27.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
27.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
27.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
27.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
27.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
27.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
26.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
26.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
26.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
26.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
26.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
26.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
26.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
26.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
26.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
26.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
26.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
25.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
25.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
25.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
25.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
25.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
25.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
25.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
25.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
25.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
25.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
24.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
24.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
24.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
24.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
24.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
24.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
24.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
24.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
24.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
23.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
23.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
23.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
23.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
23.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
23.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
23.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
23.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
23.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
23.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
23.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
23.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
23.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
23.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
23.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
23.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
22.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
22.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
22.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
22.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
22.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
22.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
22.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
22.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
22.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
22.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
21.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
21.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
21.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
21.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
21.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
21.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
21.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
21.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
21.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
21.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
21.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
21.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
21.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
21.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
21.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
21.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
21.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
21.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
20.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
20.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
20.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
20.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
20.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
20.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
20.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
20.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
20.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
20.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
20.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
20.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
20.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
20.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
20.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
20.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
20.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
20.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
20.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
20.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
20.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
20.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
20.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
20.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
19.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
19.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
19.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
19.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
19.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
19.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
19.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
19.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
19.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
19.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
19.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
19.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
19.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
19.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
19.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
19.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
19.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
18.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
18.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
18.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
18.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
18.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
18.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
18.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
18.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
18.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
18.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
17.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
17.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
17.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
17.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
17.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
17.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
17.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
17.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
17.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
17.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
17.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
17.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
17.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
17.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
16.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
16.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
16.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
16.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
16.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
16.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
16.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
16.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
16.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
16.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
16.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
16.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
16.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
16.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
16.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
16.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
15.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
15.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
15.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
15.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
15.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
15.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
15.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
15.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
15.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
15.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
15.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
15.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
14.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
14.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
14.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
14.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
14.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
14.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
14.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
14.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
14.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
14.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
14.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
14.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
14.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
14.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
13.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
13.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
13.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
13.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
12.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
12.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
12.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
12.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
12.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
12.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
12.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
12.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
12.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
11.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
11.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
11.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
11.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
11.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
11.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
11.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
11.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
11.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
11.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
10.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
10.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
10.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
10.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
10.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
10.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
9.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
9.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
9.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
9.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
9.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
9.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
8.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
8.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
8.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
8.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
8.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
7.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
7.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
7.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
7.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
6.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
6.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
6.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
6.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
6.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
5.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
5.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
5.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
4.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
4.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
3.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
3.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
3.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
1.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
1.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC16A1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
36.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
200.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
127.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
126.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
98.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
68.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
64.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
62.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
61.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
58.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
58.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
54.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
51.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
49.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
48.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
47.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
46.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
45.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
44.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
44.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
43.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
42.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
42.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
42.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
41.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
40.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
40.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
40.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
39.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
39.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
39.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
38.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
38.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
38.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
38.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
37.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
37.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
37.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
36.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
36.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
36.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
36.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
35.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
35.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
35.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
34.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
34.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
32.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
31.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
31.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
31.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
31.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
30.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
30.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
30.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
30.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
30.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
29.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
29.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
29.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
29.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
29.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
28.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
28.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
27.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
26.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
26.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
25.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
24.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
24.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
23.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
23.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
22.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
22.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
22.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
22.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
22.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
21.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
21.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
21.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
21.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
20.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
20.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
19.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
19.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
18.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
18.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
18.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
16.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
16.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
16.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
15.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
14.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
14.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
13.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
13.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
12.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
10.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC16A1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
79.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
50.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
47.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
38.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
36.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
31.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
30.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
30.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
29.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
28.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
28.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
23.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
22.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
21.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
21.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
20.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
20.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
20.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
20.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
20.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
19.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
19.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
19.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
18.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
18.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
17.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
17.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
17.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
17.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
17.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
16.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
16.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
16.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
15.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
14.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
13.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
13.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
13.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
13.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
12.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
12.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
12.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
12.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
11.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
11.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
11.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
11.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
10.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
10.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
10.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
10.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
10.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
10.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
10.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
9.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
9.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
9.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
9.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
9.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
9.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
9.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
8.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
8.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
8.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
8.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
8.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
8.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
8.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
8.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
8.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
8.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
7.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
7.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
7.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
7.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
7.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
7.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
7.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
7.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
7.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
7.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
6.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
6.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
6.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
6.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
6.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
6.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
6.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
6.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
6.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
6.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
6.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
6.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
5.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
5.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
5.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
5.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
5.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
5.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
5.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
5.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
5.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
5.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
5.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
5.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
5.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
4.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
4.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
4.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
4.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
4.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
4.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
4.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
4.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
4.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
4.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
4.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
4.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
4.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
4.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
3.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
3.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
3.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
3.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
3.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
3.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
3.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
3.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
3.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
3.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
3.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
3.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
3.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
3.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
3.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
3.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
3.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
3.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
3.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
2.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
2.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
2.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
2.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
2.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
2.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
2.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
2.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
2.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
2.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
2.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
2.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
2.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
2.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
2.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
2.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
2.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
2.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
2.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
2.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
2.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
2.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
2.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
2.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
2.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
2.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
2.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
1.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
1.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
1.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
1.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
1.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
1.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
1.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
1.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
1.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
1.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
1.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
1.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
1.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
1.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
1.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
1.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
1.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
1.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
1.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
1.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
1.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
1.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
1.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
1.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
1.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
1.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
1.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
1.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
1.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
1.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
1.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
1.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
1.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
1.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
1.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
1.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
0.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
0.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
0.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
0.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
0.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
0.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
0.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
0.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
0.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
0.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
0.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
0.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
0.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
0.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
0.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
0.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
0.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
0.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
0.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
0.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
0.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
0.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
0.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
0.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
0.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
0.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
0.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
0.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
0.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
0.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
0.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
0.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
0.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
0.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
0.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
0.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
0.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
0.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
0.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
0.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
0.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
0.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
0.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
0.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
0.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
0.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
0.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
0.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
0.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
2.3
CPT0021240003
Tumor
1.5
CPT0081880003
Tumor
1.4
CPT0001180009
Tumor
1.4
CPT0025230003
Tumor
1.2
CPT0088690003
Tumor
1.1
CPT0075130003
Tumor
1.1
CPT0086030003
Tumor
1.0
CPT0088480003
Tumor
0.9
CPT0025880003
Tumor
0.9
CPT0069000003
Tumor
0.9
CPT0063630003
Tumor
0.8
CPT0089020003
Tumor
0.8
CPT0023350003
Tumor
0.8
CPT0007320003
Tumor
0.8
CPT0012280003
Tumor
0.7
CPT0065450001
Normal
0.7
CPT0009000003
Tumor
0.7
CPT0088780001
Normal
0.7
CPT0025050003
Tumor
0.7
CPT0000640003
Tumor
0.6
CPT0088970003
Tumor
0.6
CPT0087040003
Tumor
0.6
CPT0001500009
Tumor
0.6
CPT0010160003
Tumor
0.6
CPT0002270011
Tumor
0.6
CPT0078510003
Tumor
0.6
CPT0088630003
Tumor
0.6
CPT0078930003
Tumor
0.6
CPT0065690003
Tumor
0.6
CPT0077490003
Tumor
0.6
CPT0079480003
Tumor
0.6
CPT0025580004
Tumor
0.6
CPT0088760003
Tumor
0.6
CPT0015810003
Tumor
0.6
CPT0079380003
Tumor
0.5
CPT0092730003
Tumor
0.5
CPT0079230003
Tumor
0.5
CPT0000870016
Tumor
0.5
CPT0088500001
Normal
0.5
CPT0012670003
Tumor
0.4
CPT0086950003
Tumor
0.4
CPT0064370003
Tumor
0.4
CPT0006900003
Tumor
0.4
CPT0065750003
Tumor
0.4
CPT0075720003
Tumor
0.4
CPT0089460004
Tumor
0.4
CPT0076350001
Normal
0.4
CPT0079270003
Tumor
0.4
CPT0001260009
Tumor
0.4
CPT0014370004
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0020020001
Normal
0.3
CPT0006630003
Tumor
0.3
CPT0077140001
Normal
0.3
CPT0078830003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0000780007
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0086890003
Normal
0.2
CPT0088710001
Normal
0.2
CPT0063320003
Tumor
0.2
CPT0077500001
Normal
0.1
CPT0086820003
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0026420001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0015910003
Tumor
0.1
CPT0077110003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0079410003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0066430001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0081600003
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0025170003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0069160003
Tumor
-0.1
CPT0078840001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0025060001
Normal
-0.2
CPT0006530001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0019130003
Tumor
-0.2
CPT0012550003
Tumor
-0.2
CPT0001190001
Normal
-0.2
CPT0023690003
Tumor
-0.2
CPT0023710001
Normal
-0.2
CPT0065870003
Tumor
-0.2
CPT0089040001
Normal
-0.2
CPT0011410003
Tumor
-0.2
CPT0065810003
Tumor
-0.2
CPT0000790001
Normal
-0.2
CPT0086360003
Tumor
-0.2
CPT0012090003
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0001540009
Tumor
-0.3
CPT0081620001
Normal
-0.3
CPT0013790003
Normal
-0.3
CPT0015730003
Tumor
-0.3
CPT0007470001
Normal
-0.3
CPT0086970003
Normal
-0.3
CPT0078530001
Normal
-0.3
CPT0010170001
Normal
-0.3
CPT0082010001
Normal
-0.4
CPT0066480003
Tumor
-0.4
CPT0018250001
Normal
-0.4
CPT0064400001
Normal
-0.4
CPT0069010001
Normal
-0.5
CPT0088570001
Normal
-0.5
CPT0014350001
Normal
-0.5
CPT0086830003
Normal
-0.5
CPT0009060003
Tumor
-0.5
CPT0092290003
Tumor
-0.5
CPT0012770003
Normal
-0.5
CPT0065820001
Normal
-0.5
CPT0066520001
Normal
-0.6
CPT0086870003
Tumor
-0.6
CPT0078940001
Normal
-0.6
CPT0065430003
Tumor
-0.6
CPT0017450001
Normal
-0.6
CPT0075560003
Tumor
-0.6
CPT0014160003
Tumor
-0.6
CPT0078670001
Normal
-0.6
CPT0024670003
Tumor
-0.6
CPT0088640003
Normal
-0.7
CPT0063640001
Normal
-0.7
CPT0088550004
Tumor
-0.7
CPT0025920001
Normal
-0.7
CPT0075570001
Normal
-0.7
CPT0084560003
Tumor
-0.7
CPT0086370003
Normal
-0.7
CPT0011240003
Tumor
-0.7
CPT0020120003
Tumor
-0.7
CPT0092310003
Normal
-0.7
CPT0000660001
Normal
-0.7
CPT0001220008
Tumor
-0.8
CPT0025610001
Normal
-0.8
CPT0025110003
Tumor
-0.8
CPT0001510001
Normal
-0.8
CPT0087050003
Normal
-0.8
CPT0025290003
Tumor
-0.8
CPT0001550001
Normal
-0.9
CPT0010120001
Normal
-0.9
CPT0081990003
Tumor
-0.9
CPT0063330001
Normal
-1.0
CPT0019160001
Normal
-1.0
CPT0078660003
Tumor
-1.0
CPT0007870001
Normal
-1.1
CPT0012570003
Normal
-1.1
CPT0092190003
Normal
-1.3
CPT0002370001
Normal
-1.3
CPT0012900004
Tumor
-1.4
CPT0014130001
Normal
-1.4
CPT0014470001
Normal
-1.4
CPT0009080003
Normal
-1.4
CPT0024680001
Normal
-1.4
CPT0069190001
Normal
-1.5
CPT0001270001
Normal
-1.5
CPT0077320001
Normal
-1.5
CPT0017410003
Tumor
-1.5
CPT0079510001
Normal
-1.5
CPT0084590001
Normal
-1.5
CPT0012920003
Normal
-1.6
CPT0009020003
Normal
-1.6
CPT0012640003
Normal
-1.8
CPT0075170001
Normal
-1.8
CPT0001230001
Normal
-1.8
CPT0078800003
Tumor
-2.3
CPT0079180003
Tumor
-2.4
CPT0079300001
Normal
-2.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
