Expression of MSN in head and neck cancer

HEAD AND NECK SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

MSN is not prognostic in Head and Neck Squamous Cell Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 241.22

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

250.3

Number of samples

492

Samples

Sample	Description	TPM
TCGA-DQ-5631-01A	0 years, male, white, stage:'--, dead, 548 days	978.2
TCGA-D6-6826-01A	0 years, female, white, stage:Stage IVA, dead, 348 days	905.6
TCGA-CR-6474-01A	0 years, male, white, stage:Stage IVA, dead, 564 days	870.4
TCGA-CV-7090-01A	0 years, male, white, stage:Stage II, alive, 5252 days	836.7
TCGA-D6-6516-01A	0 years, male, white, stage:Stage I, alive, 773 days	687.9
TCGA-CN-5363-01A	0 years, male, black or african american, stage:Stage IVB, dead, 253 days	657.5
TCGA-CN-5366-01A	0 years, male, white, stage:Stage IVA, dead, 360 days	644.0
TCGA-DQ-7588-01A	0 years, male, white, stage:'--, dead, 427 days	632.3
TCGA-CN-6013-01A	0 years, male, white, stage:Stage IVA, dead, 727 days	611.2
TCGA-CV-6959-01A	0 years, male, white, stage:Stage III, dead, 256 days	599.2
TCGA-CN-A499-01A	0 years, female, white, stage:Stage II, alive, 717 days	587.5
TCGA-CR-6478-01A	0 years, female, white, stage:'--, dead, 183 days	582.4
TCGA-CN-6018-01A	0 years, female, white, stage:Stage IVA, dead, 580 days	581.1
TCGA-CQ-7065-01A	0 years, male, asian, stage:Stage II, alive, 1628 days	580.8
TCGA-CV-7416-01A	0 years, female, white, stage:Stage IVA, dead, 763 days	575.7
TCGA-CV-7102-01A	0 years, female, white, stage:Stage IVA, dead, 56 days	574.8
TCGA-CV-7235-01A	0 years, male, white, stage:Stage II, alive, 2347 days	555.0
TCGA-DQ-7592-01A	0 years, male, american indian or alaska native, stage:'--, alive, 1143 days	552.2
TCGA-HD-7753-01A	0 years, male, black or african american, stage:Stage I, alive, 866 days	552.2
TCGA-CQ-7069-01A	0 years, female, white, stage:Stage II, alive, 1274 days	550.0
TCGA-CV-7236-01A	0 years, female, white, stage:Stage IVA, dead, 144 days	544.5
TCGA-CR-7365-01A	0 years, male, white, stage:Stage IVA, alive, 1191 days	543.8
TCGA-HD-7229-01A	0 years, male, white, stage:Stage IVA, alive, 1027 days	537.8
TCGA-CN-5367-01A	0 years, female, white, stage:Stage IVA, dead, 352 days	533.9
TCGA-CN-4725-01A	0 years, male, white, stage:Stage II, alive, 1157 days	525.5
TCGA-CQ-5326-01A	0 years, male, white, stage:Stage IVA, dead, 89 days	524.6
TCGA-CN-4731-01A	0 years, female, white, stage:Stage IVA, dead, 998 days	509.5
TCGA-CR-6473-01A	0 years, male, white, stage:'--, alive, 1125 days	508.6
TCGA-CV-6940-01A	0 years, female, white, stage:Stage III, dead, 804 days	507.2
TCGA-CN-5359-01A	0 years, male, white, stage:Stage IVA, dead, 377 days	506.9
TCGA-CR-7380-01A	0 years, male, white, stage:Stage IVB, dead, 606 days	504.7
TCGA-CR-6477-01A	0 years, female, white, stage:'--, alive, 514 days	498.3
TCGA-CV-7255-01A	0 years, female, white, stage:Stage IVA, dead, 64 days	482.9
TCGA-CV-7247-01A	0 years, male, white, stage:Stage III, dead, 577 days	477.6
TCGA-CQ-6219-01A	0 years, female, white, stage:Stage IVA, dead, 479 days	477.0
TCGA-CV-7178-01A	0 years, female, white, stage:Stage IVA, dead, 2166 days	473.8
TCGA-BA-6873-01A	0 years, male, white, stage:Stage IVA, alive, 122 days	470.3
TCGA-CV-5442-01A	0 years, female, white, stage:Stage IVA, alive, 2327 days	470.2
TCGA-CV-7097-01A	0 years, male, white, stage:Stage II, dead, 385 days	467.8
TCGA-CX-7219-01A	0 years, male, black or african american, stage:Stage IVA, alive, 1045 days	465.3
TCGA-CV-7104-01A	0 years, female, white, stage:Stage IVA, dead, 393 days	463.4
TCGA-P3-A6T0-01A	0 years, female, white, stage:Stage IVA, alive, 578 days	461.5
TCGA-H7-8502-01A	0 years, male, white, stage:Stage IVA, alive, 458 days	455.4
TCGA-CV-7252-01A	0 years, female, black or african american, stage:Stage IVA, dead, 151 days	454.1
TCGA-BA-5555-01A	0 years, male, black or african american, stage:Stage IVA, alive, 520 days	443.1
TCGA-CQ-5334-01A	0 years, male, white, stage:Stage IVA, dead, 129 days	440.7
TCGA-P3-A6T8-01A	0 years, male, white, stage:Stage IVA, alive, 400 days	439.9
TCGA-CN-4734-01A	0 years, male, white, stage:Stage II, alive, 1690 days	439.5
TCGA-CN-6996-01A	0 years, female, white, stage:Stage IVA, dead, 530 days	439.0
TCGA-HD-8635-01A	0 years, female, white, stage:Stage III, alive, 695 days	438.6
TCGA-CQ-5330-01A	0 years, female, white, stage:Stage IVA, alive, 1897 days	438.0
TCGA-HD-7831-01A	0 years, male, white, stage:Stage IVA, alive, 667 days	437.3
TCGA-BB-8596-01A	0 years, female, white, stage:Stage IVA, alive, 2161 days	434.2
TCGA-CN-5356-01A	0 years, male, white, stage:Stage III, alive, 1409 days	431.4
TCGA-CR-6493-01A	0 years, male, black or african american, stage:Stage IVA, dead, 282 days	431.1
TCGA-CV-6950-01A	0 years, male, white, stage:Stage IVA, dead, 459 days	429.1
TCGA-CV-6003-01A	0 years, female, white, stage:Stage III, alive, 1665 days	427.4
TCGA-F7-8489-01A	0 years, male, white, stage:Stage II, alive, 658 days	426.9
TCGA-CR-6488-01A	0 years, female, white, stage:Stage II, alive, 379 days	424.7
TCGA-D6-8569-01A	0 years, male, white, stage:Stage II, alive, 770 days	424.6
TCGA-F7-A61W-01A	0 years, male, asian, stage:Stage IVA, alive, 14 days	424.0
TCGA-BA-5557-01A	0 years, female, stage:Stage III, alive, 623 days	422.9
TCGA-CV-7434-01A	0 years, male, white, stage:Stage IVA, dead, 218 days	418.4
TCGA-CV-7091-01A	0 years, male, white, stage:Stage I, alive, 3381 days	417.1
TCGA-CR-7382-01A	0 years, male, white, stage:Stage IVA, alive, 796 days	414.6
TCGA-C9-A47Z-01A	0 years, female, asian, stage:Stage III, dead, 191 days	413.1
TCGA-CV-7438-01A	0 years, female, white, stage:Stage I, dead, 194 days	412.7
TCGA-CR-7373-01A	0 years, male, white, stage:Stage IVA, alive, 889 days	412.2
TCGA-CV-7407-01A	0 years, female, white, stage:Stage II, dead, 1081 days	411.9
TCGA-CV-5977-01A	0 years, male, white, stage:Stage IVA, alive, 1840 days	408.3
TCGA-D6-6517-01A	0 years, male, white, stage:Stage III, alive, 292 days	406.8
TCGA-D6-6825-01A	0 years, male, white, stage:Stage I, alive, 491 days	404.9
TCGA-CR-7376-01A	0 years, male, white, stage:Stage III, alive, 972 days	400.3
TCGA-P3-A6SX-01A	0 years, male, white, stage:Stage III, dead, 1430 days	398.5
TCGA-CQ-A4CB-01A	0 years, male, stage:Stage III, alive, 893 days	396.9
TCGA-HD-7832-01A	0 years, male, white, stage:Stage IVA, alive, 836 days	396.8
TCGA-CV-7433-01A	0 years, male, white, stage:Stage IVA, dead, 601 days	396.2
TCGA-D6-6823-01A	0 years, male, white, stage:Stage II, alive, 701 days	396.1
TCGA-CV-7415-01A	0 years, male, white, stage:Stage IVA, dead, 695 days	395.3
TCGA-D6-A4Z9-01A	0 years, male, white, stage:Stage IVA, alive, 539 days	394.4
TCGA-CQ-A4CH-01A	0 years, male, asian, stage:Stage II, dead, 379 days	393.7
TCGA-UF-A7JC-01A	0 years, male, white, stage:Stage IVA, dead, 546 days	393.7
TCGA-CV-7410-01A	0 years, male, white, stage:Stage III, dead, 6417 days	393.3
TCGA-CR-7379-01A	0 years, female, white, stage:Stage IVA, alive, 1036 days	393.1
TCGA-IQ-A61O-01A	0 years, male, white, stage:Stage IVA, dead, 421 days	392.6
TCGA-CV-5436-01A	0 years, male, stage:Stage IVA, dead, 584 days	392.2
TCGA-CN-6011-01A	0 years, male, white, stage:Stage IVA, alive, 933 days	391.8
TCGA-CR-7397-01A	0 years, male, white, stage:Stage IVA, alive, 754 days	391.5
TCGA-CN-4742-01A	0 years, female, white, stage:Stage IVA, dead, 397 days	386.5
TCGA-P3-A6T3-01A	0 years, male, white, stage:Stage IVA, dead, 577 days	384.9
TCGA-CV-6943-01A	0 years, male, white, stage:Stage III, dead, 602 days	384.0
TCGA-F7-8298-01A	0 years, male, white, stage:Stage I, alive, 995 days	380.5
TCGA-CR-7392-01A	0 years, female, white, stage:Stage IVA, alive, 1425 days	379.1
TCGA-CR-7399-01A	0 years, female, white, stage:Stage IVA, alive, 181 days	378.9
TCGA-HD-A6HZ-01A	0 years, female, white, stage:Stage III, alive, 111 days	376.1
TCGA-CQ-6224-01A	0 years, male, white, stage:Stage IVA, alive, 1721 days	375.2
TCGA-CV-7568-01A	0 years, female, white, stage:Stage IVA, dead, 927 days	374.4
TCGA-WA-A7GZ-01A	0 years, male, white, stage:'--, dead, 625 days	372.0
TCGA-CR-7372-01A	0 years, male, white, stage:Stage I, alive, 759 days	371.2
TCGA-CR-7377-01A	0 years, male, white, stage:Stage IVA, dead, 279 days	368.4
TCGA-CV-7435-01A	0 years, female, white, stage:Stage IVA, dead, 4680 days	366.7
TCGA-CV-7095-01A	0 years, female, stage:Stage II, dead, 572 days	365.2
TCGA-CV-7429-01A	0 years, male, white, stage:Stage IVA, dead, 107 days	365.1
TCGA-CR-7386-01A	0 years, male, white, stage:Stage IVA, alive, 1430 days	364.0
TCGA-CV-7428-01A	0 years, male, white, stage:Stage IVA, dead, 1671 days	363.9
TCGA-CV-7100-01A	0 years, male, white, stage:Stage III, dead, 274 days	363.4
TCGA-CV-7423-01A	0 years, male, white, stage:Stage II, dead, 3059 days	362.1
TCGA-CQ-A4CG-01A	0 years, female, white, stage:Stage III, dead, 430 days	358.0
TCGA-CV-5979-01A	0 years, male, white, stage:Stage IVA, alive, 1315 days	356.9
TCGA-CN-4740-01A	0 years, female, white, stage:Stage IVA, dead, 839 days	353.3
TCGA-CN-5361-01A	0 years, male, white, stage:Stage IVA, dead, 2120 days	352.6
TCGA-CR-7383-01A	0 years, female, white, stage:Stage I, dead, 521 days	349.2
TCGA-CN-6989-01A	0 years, male, white, stage:Stage IVA, dead, 980 days	348.6
TCGA-CQ-6220-01A	0 years, male, white, stage:Stage III, dead, 985 days	347.4
TCGA-CV-7425-01A	0 years, female, white, stage:Stage III, dead, 1718 days	345.6
TCGA-UF-A7JK-01A	0 years, male, stage:Stage IVA, dead, 424 days	343.3
TCGA-CV-7432-01A	0 years, male, white, stage:Stage II, dead, 2570 days	342.7
TCGA-D6-6515-01A	0 years, female, white, stage:Stage II, dead, 403 days	340.4
TCGA-CV-5435-01A	0 years, male, white, stage:Stage IVA, dead, 2319 days	340.2
TCGA-BA-5556-01A	0 years, female, white, stage:Stage II, alive, 725 days	337.4
TCGA-CQ-A4C6-01A	0 years, male, asian, stage:Stage II, alive, 1353 days	336.9
TCGA-CN-4736-01A	0 years, female, white, stage:'--, dead, 395 days	334.3
TCGA-CN-6010-01A	0 years, male, white, stage:Stage IVA, alive, 1523 days	333.8
TCGA-CN-5355-01A	0 years, male, black or african american, stage:Stage IVA, alive, 1278 days	332.9
TCGA-CN-6016-01A	0 years, male, white, stage:Stage IVA, alive, 1443 days	331.5
TCGA-BA-5558-01A	0 years, male, white, stage:'--, alive, 1995 days	331.2
TCGA-P3-A6T2-01A	0 years, male, white, stage:Stage IVA, alive, 2298 days	330.4
TCGA-D6-8568-01A	0 years, male, white, stage:Stage II, alive, 759 days	329.1
TCGA-CN-5370-01A	0 years, male, white, stage:Stage III, dead, 259 days	328.2
TCGA-CQ-6221-01A	0 years, male, white, stage:'--, alive, 1000 days	328.1
TCGA-CN-4735-01A	0 years, male, white, stage:Stage IVA, alive, 1737 days	328.1
TCGA-CN-6994-01A	0 years, male, white, stage:Stage IVA, alive, 1183 days	326.9
TCGA-CN-4729-01A	0 years, male, white, stage:Stage III, alive, 392 days	324.5
TCGA-CV-5444-01A	0 years, male, black or african american, stage:Stage IVA, alive, 2437 days	324.5
TCGA-CV-6941-01A	0 years, male, white, stage:Stage III, dead, 342 days	321.2
TCGA-CV-6934-01A	0 years, female, white, stage:Stage IVA, dead, 65 days	320.8
TCGA-IQ-A61E-01A	0 years, female, white, stage:Stage III, alive, 1147 days	319.6
TCGA-CR-7401-01A	0 years, male, white, stage:Stage I, alive, 1077 days	319.2
TCGA-CQ-5324-01A	0 years, male, white, stage:Stage III, alive, 1593 days	319.2
TCGA-CV-6935-01A	0 years, male, white, stage:Stage IVA, dead, 295 days	318.6
TCGA-CQ-7068-01A	0 years, female, white, stage:Stage II, alive, 1309 days	318.2
TCGA-IQ-A6SG-01A	0 years, female, white, stage:Stage III, alive, 579 days	315.5
TCGA-CN-6995-01A	0 years, male, white, stage:Stage IVA, dead, 112 days	315.4
TCGA-DQ-5625-01A	0 years, female, white, stage:'--, dead, 1133 days	310.8
TCGA-QK-A64Z-01A	0 years, female, white, stage:Stage IVA, dead, 641 days	310.7
TCGA-CN-4723-01A	0 years, male, white, stage:Stage IVA, alive, 1699 days	308.6
TCGA-BA-5151-01A	0 years, male, white, stage:Stage IVA, alive, 722 days	308.0
TCGA-CN-A49B-01A	0 years, male, white, stage:Stage III, alive, 904 days	307.0
TCGA-CN-5365-01A	0 years, male, white, stage:Stage IVB, dead, 351 days	305.5
TCGA-P3-A5QA-01A	0 years, male, stage:Stage I, alive, 2182 days	305.2
TCGA-T3-A92M-01A	0 years, male, black or african american, stage:Stage IVA, alive, 417 days	305.1
TCGA-CV-7440-01A	0 years, male, white, stage:Stage II, dead, 675 days	303.5
TCGA-CN-5373-01A	0 years, female, white, stage:Stage I, alive, 1584 days	303.2
TCGA-UF-A7JV-01A	0 years, female, white, stage:Stage IVA, dead, 90 days	302.9
TCGA-BA-6872-01A	0 years, male, white, stage:'--, dead, 384 days	301.1
TCGA-CN-6997-01A	0 years, male, white, stage:Stage IVA, dead, 988 days	300.9
TCGA-CQ-6223-01A	0 years, male, white, stage:Stage II, alive, 1428 days	300.3
TCGA-CN-4728-01A	0 years, male, white, stage:Stage IVA, alive, 1724 days	300.0
TCGA-CR-7395-01A	0 years, female, white, stage:Stage II, alive, 930 days	299.0
TCGA-CR-7368-01A	0 years, male, white, stage:Stage IVA, alive, 1245 days	296.9
TCGA-CV-7427-01A	0 years, female, white, stage:Stage II, dead, 4760 days	295.7
TCGA-CN-6024-01A	0 years, male, white, stage:Stage IVA, dead, 337 days	295.5
TCGA-CR-7369-01A	0 years, male, white, stage:Stage IVA, dead, 1090 days	295.2
TCGA-CQ-7063-01A	0 years, female, white, stage:Stage I, alive, 2133 days	293.0
TCGA-BA-A6DE-01A	0 years, female, white, stage:Stage II, alive, 440 days	292.5
TCGA-CQ-6229-01A	0 years, male, white, stage:Stage II, alive, 1179 days	291.2
TCGA-CN-6998-01A	0 years, male, white, stage:Stage IVA, dead, 357 days	291.0
TCGA-CN-5364-01A	0 years, male, white, stage:Stage IVA, dead, 493 days	290.7
TCGA-CN-5369-01A	0 years, female, white, stage:Stage IVA, dead, 1 days	289.1
TCGA-DQ-5624-01A	0 years, female, white, stage:'--, alive, 1778 days	286.5
TCGA-CV-7413-01A	0 years, female, white, stage:Stage II, dead, 294 days	285.8
TCGA-CN-4738-01A	0 years, male, white, stage:Stage IVA, dead, 436 days	285.4
TCGA-IQ-7630-01A	0 years, male, white, stage:Stage II, alive, 485 days	285.0
TCGA-BA-A6DI-01A	0 years, male, black or african american, stage:'--, dead, 336 days	284.7
TCGA-CN-A498-01A	0 years, female, white, stage:Stage III, dead, 773 days	284.6
TCGA-CQ-5325-01A	0 years, male, white, stage:Stage I, dead, 654 days	282.8
TCGA-CV-6952-01A	0 years, female, white, stage:Stage IVA, dead, 185 days	282.7
TCGA-CR-5247-01A	0 years, male, black or african american, stage:'--, alive, 358 days	282.6
TCGA-CV-5966-01A	0 years, female, white, stage:Stage IVA, dead, 545 days	278.9
TCGA-CV-6933-01A	0 years, male, white, stage:Stage III, dead, 2741 days	278.5
TCGA-CV-5976-01A	0 years, male, white, stage:Stage IVA, alive, 1478 days	277.6
TCGA-UF-A718-01A	0 years, male, white, stage:Stage IVA, alive, 1971 days	276.3
TCGA-HD-A4C1-01A	0 years, female, black or african american, stage:Stage IVA, alive, 11 days	275.1
TCGA-DQ-5630-01A	0 years, male, white, stage:'--, alive, 1030 days	275.0
TCGA-CV-7089-01A	0 years, male, white, stage:Stage IVA, dead, 1972 days	274.5
TCGA-CV-5439-01A	0 years, male, white, stage:Stage IVA, dead, 546 days	273.0
TCGA-CQ-5331-01A	0 years, female, white, stage:'--, alive, 1399 days	270.8
TCGA-BA-A6DG-01A	0 years, male, white, stage:'--, dead, 69 days	269.3
TCGA-CV-6961-01A	0 years, male, white, stage:Stage II, dead, 76 days	268.5
TCGA-BB-A5HU-01A	0 years, male, white, stage:Stage IVA, alive, 782 days	268.3
TCGA-CV-7245-01A	0 years, male, white, stage:Stage IVA, alive, 797 days	268.3
TCGA-CN-4726-01A	0 years, male, white, stage:Stage IVA, dead, 142 days	267.3
TCGA-CV-A464-01A	0 years, male, white, stage:Stage III, alive, 1722 days	267.1
TCGA-CN-A6V3-01A	0 years, male, white, stage:Stage IVA, alive, 742 days	265.8
TCGA-UF-A7JA-01A	0 years, female, white, stage:Stage IVA, alive, 2265 days	265.7
TCGA-CQ-A4C7-01A	0 years, male, white, stage:Stage III, dead, 353 days	265.3
TCGA-CN-6023-01A	0 years, male, white, stage:Stage IVA, alive, 1584 days	261.9
TCGA-CV-7180-01A	0 years, male, white, stage:Stage II, dead, 327 days	259.7
TCGA-IQ-A61J-01A	0 years, male, white, stage:Stage IVA, alive, 1021 days	258.9
TCGA-CR-7393-01A	0 years, male, white, stage:Stage III, alive, 993 days	257.4
TCGA-CR-7371-01A	0 years, female, white, stage:Stage III, dead, 94 days	257.2
TCGA-CR-7389-01A	0 years, male, black or african american, stage:'--, alive, 392 days	255.2
TCGA-P3-A6T7-01A	0 years, male, white, stage:Stage IVA, dead, 487 days	254.2
TCGA-CV-6939-01A	0 years, male, white, stage:Stage IVA, dead, 666 days	252.6
TCGA-CV-7238-01A	0 years, female, white, stage:Stage II, alive, 2727 days	251.7
TCGA-BA-4076-01A	0 years, male, white, stage:'--, dead, 415 days	251.3
TCGA-IQ-A6SH-01A	0 years, male, black or african american, stage:Stage III, alive, 471 days	250.1
TCGA-CV-7099-01A	0 years, female, white, stage:Stage II, dead, 243 days	249.6
TCGA-CV-5434-01A	0 years, male, black or african american, stage:Stage IVA, dead, 3314 days	248.8
TCGA-RS-A6TP-01A	0 years, male, white, stage:Stage II, alive, 516 days	248.5
TCGA-CR-6471-01A	0 years, male, white, stage:Stage IVA, dead, 1202 days	248.4
TCGA-HL-7533-01A	0 years, male, white, stage:'--, alive, 1057 days	247.7
TCGA-CV-7177-01A	0 years, female, white, stage:Stage II, dead, 663 days	244.7
TCGA-DQ-5629-01A	0 years, male, white, stage:'--, dead, 941 days	244.3
TCGA-CQ-6227-01A	0 years, male, white, stage:Stage IVA, dead, 129 days	242.8
TCGA-CV-7253-01A	0 years, male, black or african american, stage:Stage IVA, dead, 361 days	242.5
TCGA-CN-5358-01A	0 years, male, white, stage:Stage II, dead, 261 days	241.9
TCGA-CR-6491-01A	0 years, male, black or african american, stage:Stage IVA, alive, 693 days	240.6
TCGA-QK-A8ZB-01A	0 years, male, black or african american, stage:Stage IVA, alive, 542 days	240.5
TCGA-D6-6824-01A	0 years, male, white, stage:Stage IVA, alive, 77 days	240.2
TCGA-CV-A45R-01A	0 years, male, white, stage:Stage III, alive, 5480 days	238.9
TCGA-CN-4741-01A	0 years, male, white, stage:Stage IVA, alive, 2239 days	237.8
TCGA-BA-A4II-01A	0 years, male, white, stage:Stage II, alive, 918 days	237.4
TCGA-CX-7085-01A	0 years, female, white, stage:Stage I, alive, 321 days	236.4
TCGA-CV-7421-01A	0 years, male, white, stage:Stage IVA, dead, 2 days	236.4
TCGA-CR-7390-01A	0 years, male, white, stage:Stage IVA, alive, 1508 days	235.9
TCGA-F7-A50I-01A	0 years, male, white, stage:Stage IVA, alive, 92 days	234.7
TCGA-CR-7394-01A	0 years, male, white, stage:Stage IVA, alive, 1346 days	233.4
TCGA-CV-A465-01A	0 years, male, white, stage:Stage III, dead, 215 days	233.4
TCGA-CQ-6218-01A	0 years, female, white, stage:Stage IVA, alive, 1253 days	233.0
TCGA-CR-6470-01A	0 years, male, white, stage:Stage II, alive, 1521 days	233.0
TCGA-QK-A6V9-01A	0 years, male, white, stage:Stage II, alive, 833 days	232.9
TCGA-CV-A45Y-01A	0 years, male, american indian or alaska native, stage:Stage IVA, dead, 2703 days	231.3
TCGA-CV-6942-01A	0 years, female, white, stage:Stage II, alive, 4282 days	230.5
TCGA-UF-A7JD-01A	0 years, male, stage:Stage IVA, dead, 739 days	230.4
TCGA-CV-7422-01A	0 years, female, white, stage:Stage IVA, dead, 1037 days	230.2
TCGA-MT-A51W-01A	0 years, female, white, stage:Stage I, alive, 437 days	230.0
TCGA-CR-6482-01A	0 years, male, black or african american, stage:'--, alive, 345 days	229.6
TCGA-CQ-5329-01A	0 years, female, white, stage:Stage II, alive, 2143 days	229.4
TCGA-CN-4737-01A	0 years, male, white, stage:Stage IVA, alive, 625 days	228.1
TCGA-IQ-A61H-01A	0 years, male, white, stage:Stage II, alive, 1138 days	227.1
TCGA-CV-6960-01A	0 years, male, black or african american, stage:Stage III, dead, 862 days	227.1
TCGA-CN-A63W-01A	0 years, female, white, stage:Stage IVA, dead, 377 days	224.2
TCGA-CR-5249-01A	0 years, female, white, stage:Stage II, alive, 1152 days	223.6
TCGA-HD-8634-01A	0 years, female, white, stage:Stage I, dead, 385 days	222.2
TCGA-QK-A652-01A	0 years, male, white, stage:Stage III, alive, 645 days	221.6
TCGA-HD-8224-01A	0 years, male, white, stage:Stage IVA, dead, 446 days	221.2
TCGA-CN-6022-01A	0 years, male, white, stage:Stage IVA, dead, 281 days	220.7
TCGA-UF-A71B-01A	0 years, male, white, stage:Stage IVA, alive, 1506 days	219.6
TCGA-BA-A8YP-01A	0 years, male, black or african american, stage:Stage IVB, alive, 499 days	219.3
TCGA-UF-A7JO-01A	0 years, female, white, stage:Stage IVA, dead, 631 days	219.0
TCGA-CR-5250-01A	0 years, male, white, stage:'--, alive, 799 days	218.1
TCGA-CV-7261-01A	0 years, male, white, stage:Stage IVA, alive, 1512 days	216.9
TCGA-CQ-7072-01A	0 years, male, white, stage:Stage II, alive, 2359 days	216.8
TCGA-BA-A6DJ-01A	0 years, male, asian, stage:Stage IVA, dead, 407 days	216.6
TCGA-CV-6938-01A	0 years, male, white, stage:Stage II, dead, 144 days	215.2
TCGA-CV-A6JZ-01A	0 years, male, white, stage:Stage II, alive, 714 days	215.0
TCGA-CR-6492-01A	0 years, male, white, stage:Stage III, alive, 479 days	214.1
TCGA-CV-6936-01A	0 years, male, white, stage:Stage IVA, dead, 166 days	214.0
TCGA-CR-7388-01A	0 years, female, white, stage:'--, dead, 823 days	213.8
TCGA-BB-A6UO-01A	0 years, female, white, stage:Stage IVA, dead, 268 days	213.2
TCGA-CR-7391-01A	0 years, female, white, stage:Stage I, alive, 913 days	212.3
TCGA-QK-A6VC-01A	0 years, female, black or african american, stage:Stage IVA, alive, 600 days	212.2
TCGA-C9-A480-01A	0 years, female, asian, stage:Stage III, alive, 386 days	209.8
TCGA-CQ-5323-01A	0 years, male, white, stage:Stage I, alive, 1466 days	209.0
TCGA-CV-5971-01A	0 years, male, white, stage:Stage IVA, alive, 701 days	207.2
TCGA-IQ-A61G-01A	0 years, male, white, stage:Stage IVA, alive, 360 days	207.1
TCGA-CV-5970-01A	0 years, male, white, stage:Stage IVA, dead, 406 days	206.9
TCGA-BA-5559-01A	0 years, male, white, stage:'--, dead, 2083 days	205.5
TCGA-CQ-5327-01A	0 years, female, asian, stage:Stage IVA, alive, 1660 days	205.1
TCGA-CV-7437-01A	0 years, male, stage:Stage II, dead, 506 days	205.0
TCGA-CV-A460-01A	0 years, male, white, stage:'--, dead, 1838 days	204.7
TCGA-MT-A51X-01A	0 years, male, white, stage:Stage IVA, alive, 242 days	204.2
TCGA-CN-6019-01A	0 years, male, white, stage:Stage IVA, alive, 1038 days	203.4
TCGA-CV-5440-01A	0 years, male, white, stage:Stage IVA, alive, 3270 days	203.1
TCGA-BA-6870-01A	0 years, female, black or african american, stage:'--, dead, 451 days	202.9
TCGA-CR-5243-01A	0 years, male, white, stage:'--, alive, 2562 days	202.9
TCGA-CV-6945-01A	0 years, male, white, stage:Stage IVA, dead, 366 days	202.5
TCGA-CV-7446-01A	0 years, male, white, stage:Stage IVA, dead, 1093 days	201.7
TCGA-CR-6484-01A	0 years, female, asian, stage:Stage IVA, alive, 354 days	201.5
TCGA-CV-5431-01A	0 years, male, white, stage:Stage IVA, dead, 522 days	201.3
TCGA-CR-6481-01A	0 years, male, white, stage:'--, alive, 311 days	200.7
TCGA-F7-A50J-01A	0 years, female, white, stage:Stage III, alive, 947 days	200.6
TCGA-CR-7402-01A	0 years, male, white, stage:'--, alive, 911 days	199.5
TCGA-UF-A7J9-01A	0 years, male, white, stage:Stage IVA, alive, 1358 days	199.4
TCGA-CV-5430-01A	0 years, male, white, stage:Stage IVA, alive, 4241 days	198.9
TCGA-HD-A633-01A	0 years, male, white, stage:Stage IVA, alive, 421 days	198.1
TCGA-CN-6017-01A	0 years, male, white, stage:Stage IVA, dead, 853 days	198.0
TCGA-CQ-7071-01A	0 years, female, white, stage:Stage III, alive, 1311 days	197.7
TCGA-P3-A6T5-01A	0 years, female, white, stage:Stage IVA, dead, 882 days	196.9
TCGA-BA-5152-01A	0 years, male, white, stage:Stage IVA, alive, 1288 days	196.9
TCGA-H7-A6C4-01A	0 years, female, white, stage:Stage IVA, dead, 414 days	196.3
TCGA-CN-4733-01A	0 years, male, white, stage:Stage III, alive, 1586 days	195.9
TCGA-CV-5978-01A	0 years, female, black or african american, stage:Stage IVB, dead, 215 days	193.7
TCGA-CV-6951-01A	0 years, male, white, stage:Stage IVA, dead, 915 days	192.0
TCGA-P3-A6T4-01A	0 years, male, white, stage:Stage IVA, dead, 62 days	191.8
TCGA-CV-7414-01A	0 years, male, white, stage:Stage IVA, dead, 14 days	190.1
TCGA-DQ-7591-01A	0 years, male, white, stage:'--, alive, 622 days	188.1
TCGA-QK-A8Z8-01A	0 years, female, black or african american, stage:Stage IVC, dead, 171 days	186.8
TCGA-UF-A719-01A	0 years, male, stage:Stage II, alive, 1663 days	186.8
TCGA-CN-A49A-01A	0 years, male, white, stage:Stage IVB, dead, 526 days	186.3
TCGA-BA-5153-01A	0 years, male, white, stage:'--, dead, 1762 days	185.4
TCGA-CV-7103-01A	0 years, male, white, stage:Stage IVA, dead, 1591 days	185.0
TCGA-CV-6433-01A	0 years, male, white, stage:Stage II, alive, 641 days	184.2
TCGA-F7-A620-01A	0 years, male, white, stage:Stage III, alive, 543 days	183.6
TCGA-MT-A67D-01A	0 years, male, white, stage:Stage II, alive, 56 days	183.1
TCGA-BB-4217-01A	0 years, male, black or african american, stage:Stage IVA, alive, 187 days	183.0
TCGA-P3-A5Q6-01A	0 years, male, white, stage:Stage IVA, dead, 480 days	183.0
TCGA-H7-8501-01A	0 years, male, white, stage:Stage IVA, alive, 461 days	182.9
TCGA-CQ-6222-01A	0 years, male, white, stage:Stage IVA, alive, 2016 days	182.8
TCGA-CQ-A4CE-01A	0 years, female, stage:Stage II, alive, 897 days	182.6
TCGA-CN-5360-01A	0 years, male, white, stage:Stage IVA, alive, 2169 days	181.6
TCGA-CV-7101-01A	0 years, male, white, stage:Stage II, dead, 160 days	181.1
TCGA-CV-7183-01A	0 years, male, white, stage:Stage II, alive, 3981 days	181.0
TCGA-T2-A6X2-01A	0 years, male, white, stage:Stage III, alive, 987 days	181.0
TCGA-BB-4227-01A	0 years, male, white, stage:Stage IVA, alive, 134 days	179.3
TCGA-MT-A67F-01A	0 years, female, white, stage:Stage IVA, alive, 384 days	179.2
TCGA-CV-A6K2-01A	0 years, male, white, stage:Stage IVA, dead, 317 days	178.2
TCGA-WA-A7H4-01A	0 years, male, white, stage:Stage II, alive, 443 days	178.1
TCGA-QK-A6IG-01A	0 years, male, white, stage:Stage III, dead, 222 days	176.2
TCGA-BB-A5HY-01A	0 years, male, white, stage:Stage IVA, dead, 321 days	174.6
TCGA-CV-7411-01A	0 years, female, white, stage:Stage IVA, dead, 2717 days	174.5
TCGA-CR-7367-01A	0 years, male, white, stage:Stage IVA, alive, 1440 days	174.0
TCGA-CR-7364-01A	0 years, male, white, stage:Stage III, alive, 1435 days	173.0
TCGA-CR-7374-01A	0 years, female, white, stage:'--, alive, 30 days	171.1
TCGA-CR-7404-01A	0 years, male, white, stage:'--, alive, 1472 days	170.3
TCGA-UF-A7JJ-01A	0 years, male, stage:Stage IVA, alive, 549 days	169.4
TCGA-UF-A7JH-01A	0 years, male, black or african american, stage:Stage IVA, alive, 896 days	169.1
TCGA-UF-A71E-01A	0 years, male, white, stage:Stage IVA, dead, 1504 days	167.4
TCGA-F7-A623-01A	0 years, male, white, stage:Stage IVA, alive, 616 days	167.0
TCGA-CN-A63T-01A	0 years, male, white, stage:Stage IVA, alive, 225 days	166.1
TCGA-T2-A6WX-01A	0 years, female, white, stage:'--, dead, 209 days	164.1
TCGA-F7-7848-01A	0 years, male, white, stage:Stage IVA, alive, 1131 days	163.9
TCGA-RS-A6TO-01A	0 years, female, white, stage:Stage IVA, dead, 387 days	163.4
TCGA-CV-A45T-01A	0 years, female, white, stage:'--, dead, 4856 days	163.4
TCGA-CN-4722-01A	0 years, female, white, stage:Stage II, alive, 1483 days	163.3
TCGA-KU-A66T-01A	0 years, female, white, stage:Stage IVA, alive, 552 days	163.0
TCGA-CQ-A4CI-01A	0 years, male, white, stage:Stage III, alive, 950 days	163.0
TCGA-CV-7430-01A	0 years, male, white, stage:Stage IVA, dead, 495 days	162.6
TCGA-CQ-A4CD-01A	0 years, male, white, stage:Stage IVA, alive, 1022 days	162.4
TCGA-BB-4224-01A	0 years, male, white, stage:Stage IVA, alive, 278 days	161.1
TCGA-CV-7250-01A	0 years, male, white, stage:Stage IVA, dead, 2900 days	159.4
TCGA-CQ-5332-01A	0 years, male, white, stage:Stage III, dead, 317 days	158.2
TCGA-BB-4223-01A	0 years, male, white, stage:Stage IVA, alive, 3221 days	158.2
TCGA-CR-7398-01A	0 years, female, white, stage:Stage II, alive, 156 days	157.4
TCGA-BA-A4IG-01A	0 years, male, white, stage:'--, alive, 855 days	156.9
TCGA-BA-6871-01A	0 years, male, white, stage:'--, dead, 108 days	156.7
TCGA-P3-A5QE-01A	0 years, male, white, stage:Stage III, alive, 1559 days	155.2
TCGA-CN-6020-01A	0 years, male, black or african american, stage:Stage III, dead, 205 days	155.1
TCGA-CV-6948-01A	0 years, female, white, stage:Stage IVB, dead, 1289 days	154.8
TCGA-CQ-5333-01A	0 years, male, white, stage:Stage II, dead, 341 days	152.4
TCGA-BB-A5HZ-01A	0 years, male, white, stage:Stage IVA, alive, 827 days	150.9
TCGA-CV-7254-01A	0 years, male, white, stage:Stage II, dead, 1459 days	150.4
TCGA-KU-A6H7-01A	0 years, female, white, stage:Stage IVA, alive, 586 days	150.2
TCGA-CN-4730-01A	0 years, male, white, stage:Stage IVA, alive, 817 days	150.0
TCGA-F7-A61S-01A	0 years, male, white, stage:Stage III, alive, 576 days	148.5
TCGA-CV-7242-01A	0 years, female, white, stage:Stage II, alive, 1095 days	148.0
TCGA-BB-4225-01A	0 years, male, white, stage:'--, alive, 146 days	147.9
TCGA-CV-7248-01A	0 years, female, black or african american, stage:Stage IVA, dead, 521 days	146.9
TCGA-CV-7263-01A	0 years, male, black or african american, stage:Stage II, dead, 560 days	146.5
TCGA-QK-AA3K-01A	0 years, male, black or african american, stage:Stage IVA, alive, 253 days	146.3
TCGA-CN-6012-01A	0 years, male, white, stage:Stage IVA, alive, 1460 days	146.2
TCGA-T3-A92N-01A	0 years, male, black or african american, stage:Stage IVA, dead, 95 days	145.5
TCGA-CV-A6JE-01A	0 years, male, white, stage:'--, alive, 1075 days	145.3
TCGA-CN-6992-01A	0 years, male, white, stage:Stage IVA, alive, 1066 days	145.2
TCGA-CV-A461-01A	0 years, male, white, stage:'--, dead, 2064 days	144.8
TCGA-CV-6441-01A	0 years, male, white, stage:Stage III, dead, 292 days	144.0
TCGA-QK-A8ZA-01A	0 years, male, black or african american, stage:'--, dead, 371 days	143.3
TCGA-4P-AA8J-01A	0 years, male, black or african american, stage:Stage IVA, alive, 102 days	142.7
TCGA-UF-A7JT-01A	0 years, female, white, stage:Stage IVA, dead, 993 days	142.5
TCGA-QK-AA3J-01A	0 years, male, black or african american, stage:Stage I, alive, 466 days	141.9
TCGA-CV-A6JY-01A	0 years, male, white, stage:Stage IVA, alive, 646 days	141.6
TCGA-BA-4074-01A	0 years, male, white, stage:Stage IVA, dead, 462 days	140.2
TCGA-BA-4078-01A	0 years, male, white, stage:'--, dead, 276 days	140.1
TCGA-IQ-7632-01A	0 years, female, white, stage:Stage IVA, alive, 441 days	139.8
TCGA-CN-A642-01A	0 years, male, white, stage:Stage IVB, dead, 82 days	139.4
TCGA-BB-4228-01A	0 years, male, white, stage:Stage III, alive, 559 days	139.2
TCGA-CV-A45P-01A	0 years, female, white, stage:Stage I, alive, 639 days	139.1
TCGA-CV-5441-01A	0 years, male, white, stage:Stage IVA, alive, 2886 days	139.1
TCGA-CN-A63U-01A	0 years, male, white, stage:Stage IVA, alive, 964 days	139.0
TCGA-D6-A4ZB-01A	0 years, male, white, stage:Stage III, alive, 376 days	138.7
TCGA-CV-5432-01A	0 years, male, white, stage:Stage III, alive, 3930 days	138.3
TCGA-CV-5443-01A	0 years, male, black or african american, stage:Stage III, alive, 2784 days	138.1
TCGA-CV-6955-01A	0 years, female, white, stage:Stage II, dead, 334 days	137.8
TCGA-D6-A6EO-01A	0 years, male, white, stage:Stage IVA, alive, 759 days	137.8
TCGA-UF-A71A-01A	0 years, male, white, stage:Stage IVA, dead, 86 days	137.0
TCGA-CN-4727-01A	0 years, male, white, stage:Stage IVA, alive, 1560 days	136.0
TCGA-D6-A6EQ-01A	0 years, male, white, stage:Stage IVA, alive, 368 days	135.5
TCGA-CN-A6V6-01A	0 years, male, white, stage:Stage IVA, alive, 635 days	133.9
TCGA-BA-6869-01A	0 years, male, white, stage:Stage III, alive, 644 days	133.2
TCGA-CV-A45V-01A	0 years, female, white, stage:Stage IVA, dead, 32 days	132.6
TCGA-CX-7086-01A	0 years, male, black or african american, stage:Stage III, alive, 573 days	132.2
TCGA-CR-5248-01A	0 years, male, white, stage:'--, alive, 1663 days	131.8
TCGA-QK-A6VB-01A	0 years, male, white, stage:Stage IVA, alive, 641 days	131.2
TCGA-BA-A4IH-01A	0 years, male, white, stage:'--, alive, 622 days	130.8
TCGA-CR-6467-01A	0 years, male, white, stage:Stage III, alive, 1777 days	130.4
TCGA-CV-6954-01A	0 years, male, black or african american, stage:Stage IVA, dead, 2002 days	129.2
TCGA-CV-A45U-01A	0 years, male, white, stage:Stage IVA, dead, 1079 days	129.1
TCGA-CV-6953-01A	0 years, female, white, stage:Stage III, dead, 1641 days	128.0
TCGA-BA-A4IF-01A	0 years, male, white, stage:'--, alive, 895 days	127.8
TCGA-CV-A468-01A	0 years, male, stage:Stage IVA, dead, 464 days	127.6
TCGA-QK-A6IF-01A	0 years, male, white, stage:'--, alive, 704 days	127.1
TCGA-CV-A45Z-01A	0 years, male, white, stage:'--, dead, 1466 days	125.6
TCGA-BA-A6DB-01A	0 years, female, white, stage:Stage I, alive, 216 days	124.5
TCGA-D6-6827-01A	0 years, female, white, stage:Stage I, alive, 568 days	123.2
TCGA-CN-5374-01A	0 years, female, white, stage:Stage IVA, dead, 1732 days	122.4
TCGA-F7-A622-01A	0 years, male, white, stage:Stage III, dead, 359 days	122.0
TCGA-CV-6937-01A	0 years, male, white, stage:Stage II, dead, 624 days	121.3
TCGA-CV-7424-01A	0 years, male, asian, stage:Stage IVA, dead, 453 days	120.6
TCGA-TN-A7HJ-01A	0 years, male, white, stage:Stage IVA, alive, 403 days	119.2
TCGA-F7-A50G-01A	0 years, male, white, stage:Stage III, alive, 616 days	119.2
TCGA-CQ-A4C9-01A	0 years, male, stage:Stage III, alive, 707 days	116.2
TCGA-BA-4075-01A	0 years, male, black or african american, stage:Stage III, dead, 283 days	110.3
TCGA-CX-7082-01A	0 years, male, white, stage:Stage IVA, dead, 11 days	110.0
TCGA-D6-A74Q-01A	0 years, male, white, stage:Stage IVA, alive, 710 days	108.7
TCGA-CN-A63V-01A	0 years, male, white, stage:Stage IVA, alive, 679 days	108.0
TCGA-CR-6480-01A	0 years, male, white, stage:'--, alive, 362 days	105.9
TCGA-BA-A6DD-01A	0 years, male, black or african american, stage:Stage IVA, dead, 173 days	105.2
TCGA-H7-7774-01A	0 years, female, white, stage:Stage IVA, alive, 407 days	103.5
TCGA-CV-6436-01A	0 years, male, white, stage:Stage IVA, alive, 1899 days	102.3
TCGA-UP-A6WW-01A	0 years, male, white, stage:'--, alive, 518 days	101.9
TCGA-QK-A6II-01A	0 years, male, white, stage:Stage IVA, dead, 284 days	101.0
TCGA-T2-A6WZ-01A	0 years, male, white, stage:'--, dead, 484 days	98.6
TCGA-QK-A6IH-01A	0 years, female, white, stage:Stage IVB, alive, 653 days	98.5
TCGA-CV-A463-01A	0 years, female, white, stage:Stage IVA, dead, 23 days	98.5
TCGA-CR-7370-01A	0 years, female, white, stage:'--, alive, 105 days	98.2
TCGA-CV-A6JD-01A	0 years, female, white, stage:'--, dead, 182 days	97.9
TCGA-CR-7385-01A	0 years, male, white, stage:'--, alive, 997 days	96.8
TCGA-CN-A497-01A	0 years, male, stage:Stage III, alive, 1065 days	96.1
TCGA-CV-7406-01A	0 years, male, white, stage:Stage II, dead, 1748 days	95.8
TCGA-CX-A4AQ-01A	0 years, male, white, stage:Stage IVA, alive, 1555 days	92.3
TCGA-CV-A45X-01A	0 years, male, white, stage:Stage IVA, dead, 198 days	91.7
TCGA-BB-A6UM-01A	0 years, male, white, stage:Stage III, alive, 393 days	90.7
TCGA-CR-6487-01A	0 years, male, white, stage:Stage I, alive, 234 days	89.4
TCGA-CQ-6228-01A	0 years, female, white, stage:Stage IVA, dead, 456 days	88.9
TCGA-CN-A641-01A	0 years, male, white, stage:Stage IVA, alive, 367 days	88.5
TCGA-H7-A76A-01A	0 years, male, white, stage:'--, alive, 637 days	87.9
TCGA-CN-4739-01A	0 years, male, white, stage:Stage IVA, dead, 1394 days	86.5
TCGA-UF-A7JF-01A	0 years, male, white, stage:Stage IVA, alive, 1686 days	86.1
TCGA-CN-A6UY-01A	0 years, male, white, stage:Stage IVA, alive, 713 days	86.1
TCGA-D6-A6EM-01A	0 years, female, white, stage:Stage III, alive, 232 days	85.8
TCGA-CN-A49C-01A	0 years, male, white, stage:'--, alive, 645 days	85.3
TCGA-IQ-7631-01A	0 years, female, white, stage:Stage II, alive, 1172 days	84.5
TCGA-TN-A7HL-01A	0 years, male, white, stage:Stage IVA, alive, 619 days	84.0
TCGA-MZ-A5BI-01A	0 years, male, white, stage:'--, dead, 217 days	83.8
TCGA-MZ-A7D7-01A	0 years, male, white, stage:Stage IVA, alive, 547 days	81.1
TCGA-CV-7418-01A	0 years, male, black or african american, stage:Stage IVA, dead, 789 days	80.4
TCGA-HD-8314-01A	0 years, male, white, stage:Stage III, alive, 670 days	79.5
TCGA-IQ-A61I-01A	0 years, male, black or african american, stage:Stage IVA, dead, 2 days	79.1
TCGA-T2-A6X0-01A	0 years, male, white, stage:'--, alive, 216 days	78.2
TCGA-CV-6962-01A	0 years, male, white, stage:Stage IVA, dead, 126 days	73.1
TCGA-UF-A71D-01A	0 years, female, white, stage:Stage IVA, alive, 1461 days	71.9
TCGA-HD-7754-01A	0 years, male, white, stage:Stage IVA, alive, 783 days	71.8
TCGA-CN-6021-01A	0 years, female, white, stage:'--, dead, 276 days	68.8
TCGA-MT-A67A-01A	0 years, female, white, stage:Stage I, alive, 914 days	68.8
TCGA-CV-A6JT-01A	0 years, male, white, stage:Stage II, alive, 852 days	68.1
TCGA-P3-A6SW-01A	0 years, male, white, stage:Stage IVB, alive, 1120 days	67.5
TCGA-KU-A6H8-01A	0 years, male, white, stage:Stage IVA, dead, 327 days	65.4
TCGA-P3-A5Q5-01A	0 years, male, white, stage:Stage IVA, alive, 910 days	64.9
TCGA-CQ-6225-01A	0 years, male, white, stage:Stage III, dead, 403 days	64.6
TCGA-F7-A61V-01A	0 years, male, white, stage:Stage II, alive, 759 days	63.2
TCGA-CV-A6JN-01A	0 years, male, white, stage:'--, alive, 906 days	63.1
TCGA-CV-A45O-01A	0 years, male, white, stage:'--, alive, 851 days	63.1
TCGA-CN-6988-01A	0 years, male, white, stage:Stage IVA, alive, 318 days	61.0
TCGA-KU-A66S-01A	0 years, female, white, stage:Stage III, dead, 406 days	59.8
TCGA-QK-A8Z7-01A	0 years, male, black or african american, stage:Stage IVA, alive, 392 days	56.7
TCGA-BA-A6DL-01A	0 years, male, white, stage:'--, alive, 623 days	56.5
TCGA-QK-A6IJ-01A	0 years, male, white, stage:Stage III, alive, 387 days	54.1
TCGA-UF-A7JS-01A	0 years, male, white, stage:Stage IVA, dead, 680 days	53.9
TCGA-D6-A6EN-01A	0 years, male, white, stage:Stage III, alive, 687 days	51.7
TCGA-F7-A624-01A	0 years, male, white, stage:Stage II, alive, 378 days	51.2
TCGA-P3-A6T6-01A	0 years, male, white, stage:Stage IVA, dead, 395 days	49.9
TCGA-MT-A7BN-01A	0 years, male, white, stage:Stage IVA, alive, 469 days	48.0
TCGA-CR-6472-01A	0 years, male, white, stage:'--, alive, 1050 days	45.9
TCGA-CV-A45W-01A	0 years, male, white, stage:Stage II, dead, 1398 days	44.8
TCGA-CN-A6V7-01A	0 years, male, white, stage:Stage IVA, alive, 594 days	43.7
TCGA-BA-A6DA-01A	0 years, female, white, stage:Stage IVA, alive, 351 days	40.7
TCGA-HD-A6I0-01A	0 years, male, white, stage:Stage IVA, alive, 210 days	40.3
TCGA-BB-8601-01A	0 years, male, black or african american, stage:Stage III, alive, 624 days	40.0
TCGA-BA-7269-01A	0 years, male, white, stage:Stage III, alive, 1273 days	39.1
TCGA-CV-A6JU-01A	0 years, female, white, stage:Stage IVB, alive, 110 days	39.0
TCGA-CV-A6K1-01A	0 years, male, white, stage:Stage IVA, alive, 685 days	34.3
TCGA-CV-A45Q-01A	0 years, female, white, stage:'--, dead, 5152 days	27.9
TCGA-BA-A6D8-01A	0 years, male, black or african american, stage:Stage IVA, alive, 850 days	27.9
TCGA-D6-A6EK-01A	0 years, male, white, stage:Stage III, alive, 875 days	26.6
TCGA-D6-A6EP-01A	0 years, male, white, stage:Stage III, alive, 424 days	24.2
TCGA-CV-A6JM-01A	0 years, male, white, stage:'--, dead, 194 days	23.2
TCGA-P3-A5QF-01A	0 years, male, white, stage:Stage IVA, dead, 330 days	19.6
TCGA-HD-A634-01A	0 years, male, white, stage:Stage IVA, dead, 130 days	18.1
TCGA-D6-A6ES-01A	0 years, male, white, stage:Stage IVA, alive, 389 days	17.1
TCGA-MZ-A6I9-01A	0 years, male, white, stage:'--, dead, 489 days	14.5
TCGA-TN-A7HI-01A	0 years, male, white, stage:Stage IVA, alive, 412 days	10.4
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HEAD AND NECK SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)

Number of samples

183

Samples

Sample ID	Sample type	nRPX
CPT0163720003	Normal	0.9
CPT0163740003	Tumor	0.9
CPT0222360003	Tumor	0.6
CPT0248330003	Tumor	0.6
CPT0163790003	Tumor	0.6
CPT0177010003	Tumor	0.5
CPT0162990004	Tumor	0.5
CPT0196210003	Tumor	0.5
CPT0169640003	Tumor	0.4
CPT0163600003	Tumor	0.4
CPT0177200003	Tumor	0.4
CPT0261520003	Tumor	0.4
CPT0176770003	Tumor	0.4
CPT0223450003	Tumor	0.4
CPT0194790003	Tumor	0.4
CPT0194420003	Tumor	0.4
CPT0094560004	Tumor	0.4
CPT0199700003	Tumor	0.4
CPT0194960003	Tumor	0.4
CPT0011130005	Tumor	0.4
CPT0184530003	Tumor	0.3
CPT0163340003	Tumor	0.3
CPT0236620003	Tumor	0.3
CPT0163480003	Tumor	0.3
CPT0246540003	Tumor	0.3
CPT0237620004	Tumor	0.3
CPT0245550003	Tumor	0.3
CPT0011290003	Tumor	0.3
CPT0241980004	Tumor	0.3
CPT0095040003	Tumor	0.3
CPT0169890003	Tumor	0.3
CPT0163840003	Tumor	0.3
CPT0013210004	Tumor	0.3
CPT0207870004	Tumor	0.2
CPT0094280004	Tumor	0.2
CPT0196040003	Tumor	0.2
CPT0246670003	Tumor	0.2
CPT0008630003	Tumor	0.2
CPT0199820003	Tumor	0.2
CPT0226440003	Tumor	0.2
CPT0235460003	Tumor	0.2
CPT0163240003	Tumor	0.2
CPT0088060004	Tumor	0.2
CPT0163650003	Tumor	0.2
CPT0199710003	Normal	0.2
CPT0123260003	Tumor	0.2
CPT0244940004	Tumor	0.2
CPT0194250003	Tumor	0.2
CPT0094420004	Tumor	0.1
CPT0024810003	Tumor	0.1
CPT0245730003	Tumor	0.1
CPT0008520008	Tumor	0.1
CPT0237480004	Tumor	0.1
CPT0094350004	Tumor	0.1
CPT0245010003	Tumor	0.1
CPT0226340003	Tumor	0.1
CPT0123180003	Tumor	0.1
CPT0013430003	Tumor	0.1
CPT0226250004	Tumor	0.1
CPT0245300003	Tumor	0.1
CPT0235910003	Tumor	0.1
CPT0162940003	Tumor	0.1
CPT0008930003	Tumor	0.1
CPT0088410003	Tumor	0.1
CPT0177710003	Tumor	0.1
CPT0169730003	Tumor	0.1
CPT0194800003	Normal	0.1
CPT0245600003	Tumor	0.1
CPT0094490004	Tumor	0.1
CPT0236850004	Tumor	0.1
CPT0220610003	Tumor	0.0
CPT0244890004	Tumor	0.0
CPT0226030003	Tumor	0.0
CPT0245400003	Tumor	0.0
CPT0087990003	Tumor	0.0
CPT0246590003	Tumor	0.0
CPT0226390003	Tumor	0.0
CPT0226130003	Tumor	0.0
CPT0246620003	Tumor	0.0
CPT0013250003	Normal	0.0
CPT0177390003	Tumor	0.0
CPT0245500003	Tumor	0.0
CPT0194260003	Normal	0.0
CPT0256560003	Tumor	0.0
CPT0163530003	Tumor	0.0
CPT0163800003	Normal	0.0
CPT0245130003	Tumor	0.0
CPT0250310003	Tumor	0.0
CPT0222180003	Tumor	0.0
CPT0243090003	Tumor	-0.1
CPT0237130004	Tumor	-0.1
CPT0237500003	Normal	-0.1
CPT0199880003	Tumor	-0.1
CPT0248520003	Tumor	-0.1
CPT0195680003	Tumor	-0.1
CPT0013000004	Tumor	-0.1
CPT0087820003	Tumor	-0.1
CPT0245680003	Tumor	-0.1
CPT0245180003	Tumor	-0.1
CPT0237150003	Normal	-0.1
CPT0245350003	Tumor	-0.1
CPT0195860003	Tumor	-0.1
C3N-04275-05	Normal	-0.2
CPT0163860003	Normal	-0.2
C3N-01620-05	Normal	-0.2
CPT0220620003	Normal	-0.2
CPT0243140004	Normal	-0.2
CPT0278700002	Normal	-0.2
CPT0163910003	Tumor	-0.2
CPT0190860003	Normal	-0.2
CPT0088430003	Normal	-0.2
CPT0245140003	Normal	-0.2
CPT0229220002	Normal	-0.2
CPT0011320003	Normal	-0.2
CPT0201830004	Tumor	-0.2
CPT0236870003	Normal	-0.2
CPT0163430003	Normal	-0.2
CPT0127050003	Tumor	-0.3
CPT0235470002	Normal	-0.3
CPT0223460003	Normal	-0.3
CPT0008960003	Normal	-0.3
CPT0163160003	Tumor	-0.3
CPT0169920003	Normal	-0.3
CPT0281470002	Normal	-0.3
CPT0013460003	Normal	-0.3
CPT0226450003	Normal	-0.3
CPT0163410003	Tumor	-0.3
CPT0162890003	Tumor	-0.3
C3N-01758-04	Normal	-0.3
CPT0084650004	Normal	-0.3
CPT0245060004	Tumor	-0.3
CPT0088010003	Normal	-0.3
CPT0226270003	Normal	-0.4
CPT0245410003	Normal	-0.4
CPT0235920003	Normal	-0.4
CPT0013130003	Tumor	-0.4
CPT0242000004	Normal	-0.4
CPT0199830003	Normal	-0.4
CPT0201860004	Normal	-0.4
CPT0013030003	Normal	-0.4
C3N-04276-06	Normal	-0.4
CPT0245560003	Normal	-0.4
CPT0199890003	Normal	-0.4
CPT0088080003	Normal	-0.4
C3N-04279-05	Normal	-0.4
CPT0123190003	Normal	-0.4
CPT0245020003	Normal	-0.4
C3N-01859-04	Normal	-0.4
C3N-00857-05	Normal	-0.4
CPT0163090003	Tumor	-0.4
CPT0226090003	Normal	-0.4
CPT0195880003	Normal	-0.4
CPT0245450003	Tumor	-0.4
CPT0190850003	Tumor	-0.4
CPT0248350003	Normal	-0.4
CPT0237640003	Normal	-0.4
CPT0223970003	Tumor	-0.4
CPT0163490003	Normal	-0.4
CPT0195700003	Normal	-0.5
CPT0245630003	Tumor	-0.5
C3N-00295-05	Normal	-0.5
CPT0196060003	Normal	-0.5
CPT0163610003	Normal	-0.5
CPT0226400003	Normal	-0.5
CPT0222200003	Normal	-0.5
CPT0163250003	Normal	-0.5
CPT0094580003	Normal	-0.5
CPT0245460003	Normal	-0.5
CPT0123280003	Normal	-0.5
CPT0236640003	Normal	-0.5
CPT0245190003	Normal	-0.5
CPT0163020003	Normal	-0.6
CPT0163170003	Normal	-0.6
CPT0226350003	Normal	-0.6
CPT0177220003	Normal	-0.6
CPT0169740004	Normal	-0.6
CPT0084630009	Tumor	-0.6
C3N-02693-06	Normal	-0.6
CPT0245230004	Tumor	-0.6
CPT0229230003	Normal	N/A
CPT0169750003	Normal	N/A
CPT0229210003	Tumor	N/A
CPT0229190003	Tumor	N/A
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HEAD AND NECK CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	HPA000263	HPA011135	HPA011227	CAB010898	CAB047338
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Squamous cell carcinoma, NOS Squamous cell carcinoma, metastatic, NOS
Squamous cell carcinoma, NOS
Adenocarcinoma, NOS Adenoma, NOS
Adenocarcinoma, NOS