AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:74.4 nTPM
HPA Brain:53.9 nTPM
GTEx:74.4 nTPM
FANTOM5:102.8 Scaled Tags Per Million
Pig:33.3 nTPM
Mouse:143.4 nTPM
Allen mouse:5.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Brain excitatory neuronsBrain inhibitory neuronsOther brain neuronsAstrocytesBergmann gliaOligodendrocyte progenitor cellsOligodendrocytesMicrogliaEpendymal cellsChoroid plexus epithelial cellsVascular endothelial cellsPericytesVascular smooth muscle cellsFibroblastsMonocytesMacrophagesT-cellsB-cellsNK-cells0510152025nCPM

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi 53.9
Sample id Sample description nTPM
Amygdala
nTPM: 51.1
2514 Male, age 75, right hemisphere 56.9
2695 Female, age 67, right hemisphere 53.2
2814 Male, age 76, right hemisphere 50.0
2517 Female, age 94, left hemisphere 49.2
1987 Female, age 91, left hemisphere 46.4
Basal amygdala
nTPM: 52.9
2243 Female, age 91, right hemisphere 59.8
2110 Male, age 80, left hemisphere 58.2
2609 Male, age 75, right hemisphere 53.9
2685 Female, age 94, left hemisphere 51.3
2827 Female, age 67, right hemisphere 48.1
1955 Male, age 76, both hemispheres 46.2
Central amygdala
nTPM: 50.8
2826 Female, age 94, left hemisphere 57.7
2239 Male, age 80, left hemisphere 55.7
2701 Female, age 91, right hemisphere 50.8
2515 Male, age 75, right hemisphere 47.8
1905 Male, age 76, both hemispheres 42.1
Corticomedial amygdala
nTPM: 53.9
2829 Male, age 80, left hemisphere 62.1
2242 Female, age 91, right hemisphere 58.1
2428 Male, age 75, right hemisphere 55.8
2240 Male, age 76, both hemispheres 55.2
2429 Female, age 94, left hemisphere 47.1
2535 Female, age 67, right hemisphere 45.0
Lateral amygdala
nTPM: 49.7
2534 Female, age 94, left hemisphere 52.8
2256 Male, age 80, left hemisphere 52.6
2516 Male, age 75, right hemisphere 51.1
2830 Female, age 67, right hemisphere 49.5
1883 Male, age 76, both hemispheres 46.7
2255 Female, age 91, right hemisphere 45.3

AMYGDALA - GTEx RNA-seqi
Max subtype nTPMi 74.4
GTEx sample id Sample description nTPM
59.168.884.044.7115.6020406080100120140160180
Brain - Amygdala
Average nTPM: 74.4
Samples: 181

Max nTPM: 199.3
Min nTPM: 44.7
Std nTPM: 22.9
Median nTPM: 68.8
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 199.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 185.4
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 157.9
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 150.2
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 133.1
GTEX-1P4AB-0011-R4b-SM-F2T9S 50-59 years, male 127.5
GTEX-111FC-0011-R4a-SM-GIN8K 60-69 years, male 122.0
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 115.6
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 114.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 113.9
GTEX-14BMV-0011-R4a-SM-H6Q7P 50-59 years, male 113.3
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AMYGDALA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 102.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 102.8
FF:10151-102I7 76 years, female 102.8

AMYGDALA - Pig RNA-seqi
Max subtype nTPMi 33.3
Pig sample Sample description nTPM
30.731.033.630.331.20510152025303540
 		Amygdala
nTPM: 33.3
Samples: 4

Max nTPM: 40.9
Min nTPM: 30.3
Sample A Female 40.9
Sample B Female 30.8
Sample C Male 31.2
Sample D Male 30.3

AMYGDALA - Mouse RNA-seqi
Max subtype nTPMi 143.4
Mouse sample Sample description nTPM
142.3143.7144.8140.0146.2020406080100120140
 		Amygdala
nTPM: 143.4
Samples: 4

Max nTPM: 146.2
Min nTPM: 140.0
Sample A Male 143.0
Sample B Male 144.4
Sample C Female 146.2
Sample D Female 140.0

AMYGDALA - Allen Mouse ISHi
Max subtype Expression energyi 5.5
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 5.5
69080733 Antisense, RP_050324_02_D02, Mouse strain C57BL/6J (56 days, male) 5.5

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