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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
810.1
nTPM
FANTOM5:
1290.6
Scaled Tags Per Million
Pig:
1298.4
nTPM
Allen mouse:
13.9
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
810.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 633.3
2188
Female, age 91, both hemispheres
760.5
2301
Female, age 85, both hemispheres
650.0
2090
Male, age 80, both hemispheres
588.3
1984
Male, age 76, both hemispheres
534.5
Dorsal cochlear nucleus nTPM: 609.8
2802
Male, age 74, right hemisphere
749.0
2187
Female, age 91, both hemispheres
725.8
2378
Male, age 80, both hemispheres
554.8
2058
Male, age 76, both hemispheres
529.7
2370
Male, age 61, both hemispheres
489.4
Dorsal tegmental nucleus nTPM: 613.2
2326
Male, age 74, both hemispheres
768.5
2083
Male, age 80, both hemispheres
659.2
1936
Male, age 76, left hemisphere
618.2
2358
Male, age 61, both hemispheres
406.8
Dorsolateral tegmental area nTPM: 590.4
2751
Female, age 85, both hemispheres
763.0
2360
Male, age 74, both hemispheres
621.1
2654
Male, age 80, both hemispheres
620.6
2141
Male, age 76, both hemispheres
478.8
2337
Male, age 61, both hemispheres
468.3
Kolliker-Fuse nucleus nTPM: 664.9
2163
Male, age 80, both hemispheres
713.4
2793
Female, age 91, left hemisphere
697.8
2315
Male, age 76, right hemisphere
583.5
Lateral lemniscal nuclei nTPM: 673.3
2169
Male, age 76, both hemispheres
748.4
2453
Male, age 74, right hemisphere
696.3
2746
Female, age 85, left hemisphere
670.7
2036
Male, age 80, both hemispheres
634.0
2320
Female, age 91, left hemisphere
617.1
Lateral parabrachial nucleus nTPM: 643.0
2139
Female, age 85, right hemisphere
718.3
2792
Male, age 76, both hemispheres
695.4
2013
Male, age 80, both hemispheres
676.0
2790
Male, age 61, both hemispheres
482.2
Lateral vestibular nucleus nTPM: 624.8
2184
Male, age 76, both hemispheres
667.6
2311
Male, age 80, both hemispheres
582.1
Locus coeruleus nTPM: 676.4
2014
Male, age 55, unknown
774.2
2788
Male, age 74, unknown
755.0
2123
Female, age 91, both hemispheres
743.3
2720
Male, age 74, both hemispheres
675.2
2317
Female, age 72, unknown
641.0
2162
Male, age 80, both hemispheres
587.7
1980
Male, age 76, both hemispheres
558.7
Medial parabrachial nucleus nTPM: 636.3
2170
Female, age 91, both hemispheres
802.5
2854
Male, age 80, both hemispheres
688.0
2463
Female, age 85, right hemisphere
610.6
2786
Male, age 76, both hemispheres
562.3
2156
Male, age 61, both hemispheres
518.1
Medial periolivary nuclei nTPM: 738.5
2791
Male, age 74, right hemisphere
983.7
2171
Female, age 85, both hemispheres
795.6
2063
Male, age 76, both hemispheres
779.8
2081
Male, age 80, both hemispheres
585.2
2458
Female, age 91, both hemispheres
548.0
Motor facial nucleus nTPM: 702.3
2365
Male, age 74, right hemisphere
860.6
2062
Male, age 76, both hemispheres
824.2
2697
Female, age 85, both hemispheres
690.7
2126
Male, age 61, both hemispheres
638.8
2795
Female, age 91, both hemispheres
637.0
2327
Male, age 80, both hemispheres
562.3
Motor trigeminal nucleus nTPM: 583.2
2560
Male, age 74, both hemispheres
698.1
2079
Male, age 80, both hemispheres
619.6
2321
Female, age 91, both hemispheres
577.1
2309
Male, age 76, both hemispheres
566.9
2335
Male, age 61, both hemispheres
454.2
Nuclei of the trapezoid body nTPM: 760.6
2159
Male, age 61, both hemispheres
1020.1
1983
Male, age 76, both hemispheres
832.3
2735
Female, age 85, both hemispheres
759.8
2166
Male, age 80, both hemispheres
596.9
2368
Female, age 91, both hemispheres
594.0
Nucleus raphe magnus nTPM: 730.5
2160
Male, age 61, both hemispheres
978.1
2455
Male, age 74, both hemispheres
799.3
2051
Male, age 76, both hemispheres
712.2
2172
Female, age 85, both hemispheres
700.9
2328
Male, age 80, both hemispheres
597.9
2459
Female, age 91, both hemispheres
594.8
Paramedian reticular nucleus nTPM: 740.2
2050
Female, age 85, both hemispheres
834.8
2313
Male, age 61, both hemispheres
767.7
2052
Male, age 76, both hemispheres
712.7
2057
Male, age 80, both hemispheres
645.7
Pedunculopontine tegmental nucleus nTPM: 646.3
2334
Male, age 80, both hemispheres
667.1
1921
Female, age 85, both hemispheres
651.6
2338
Male, age 61, both hemispheres
620.3
Pontine nuclei nTPM: 810.1
2454
Male, age 74, left hemisphere
1025.3
2727
Male, age 61, right hemisphere
983.1
1863
Male, age 55, unknown
941.9
2109
Female, age 72, unknown
863.3
2787
Female, age 85, both hemispheres
737.4
2319
Female, age 91, both hemispheres
723.5
1968
Male, age 76, left hemisphere
700.0
2115
Male, age 80, left hemisphere
506.1
Pontine raphe nucleus nTPM: 691.5
2122
Female, age 85, midline
761.6
2853
Male, age 76, midline
621.5
Posteroventral cochlear nucleus nTPM: 651.6
2135
Female, age 91, both hemispheres
737.0
2341
Male, age 80, both hemispheres
725.5
2752
Female, age 85, both hemispheres
704.9
2070
Male, age 76, both hemispheres
591.7
2371
Male, age 61, both hemispheres
499.1
Principal sensory trigeminal nucleus nTPM: 696.2
2158
Male, age 61, both hemispheres
745.2
2008
Male, age 80, left hemisphere
705.6
2367
Female, age 91, left hemisphere
694.8
2324
Male, age 76, both hemispheres
639.3
Reticular pontine nucleus, caudal nTPM: 699.9
2559
Male, age 74, both hemispheres
851.8
2092
Male, age 76, both hemispheres
717.4
2457
Female, age 91, both hemispheres
706.6
2332
Male, age 80, right hemisphere
523.7
Reticular pontine nucleus, oral nTPM: 744.2
2361
Male, age 74, both hemispheres
848.2
1939
Male, age 80, both hemispheres
772.7
2366
Female, age 91, both hemispheres
744.4
2012
Female, age 85, both hemispheres
722.5
2167
Male, age 76, both hemispheres
633.2
Reticulotegmental nucleus nTPM: 635.8
2322
Female, age 91, both hemispheres
701.3
2325
Male, age 76, both hemispheres
639.7
2452
Male, age 74, both hemispheres
635.3
2333
Male, age 80, both hemispheres
567.0
Spinal trigeminal nucleus, oral nTPM: 626.5
2737
Female, age 85, both hemispheres
659.9
2164
Male, age 80, both hemispheres
647.2
1978
Male, age 76, both hemispheres
572.2
Subcoeruleus area nTPM: 672.4
1958
Male, age 80, both hemispheres
768.9
2369
Female, age 85, left hemisphere
748.4
2323
Female, age 91, left hemisphere
642.4
2451
Male, age 74, both hemispheres
605.1
2089
Male, age 76, left hemisphere
597.1
Superior olive nTPM: 735.9
2364
Male, age 74, right hemisphere
913.2
1875
Female, age 85, both hemispheres
864.1
2020
Male, age 76, both hemispheres
757.4
2329
Male, age 80, right hemisphere
580.4
2561
Female, age 91, both hemispheres
564.5
Ventral periolivary nuclei nTPM: 685.1
2023
Male, age 76, both hemispheres
815.2
2165
Male, age 80, both hemispheres
688.9
2130
Female, age 85, both hemispheres
668.8
2794
Female, age 91, left hemisphere
567.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 663.2
2449
Male, age 74, both hemispheres
759.3
1959
Male, age 76, both hemispheres
751.9
2840
Female, age 85, both hemispheres
717.7
2161
Male, age 80, both hemispheres
603.1
2359
Male, age 61, both hemispheres
589.3
2456
Female, age 91, both hemispheres
558.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1298.4
Pig sample
Sample description
nTPM
Pons nTPM: 1298.4
Samples: 4
Max nTPM: 1543.3
Min nTPM: 879.7
Sample A
Female
1543.3
Sample B
Female
879.7
Sample C
Male
1433.0
Sample D
Male
1337.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.