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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1118.3
nTPM
HPA Brain:
750.9
nTPM
GTEx:
1118.3
nTPM
FANTOM5:
1158.3
Scaled Tags Per Million
Pig:
1033.3
nTPM
Mouse:
1701.0
nTPM
Allen mouse:
15.4
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
750.9
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 590.3
2019
Male, age 18, unknown
814.9
1870
Female, age 42, unknown
702.8
2411
Female, age 72, unknown
697.9
1827
Male, age 72, unknown
659.3
1833
Male, age 53, unknown
570.3
1830
Male, age 51, unknown
537.1
2828
Female, age 72, unknown
517.6
2219
Male, age 76, both hemispheres
491.7
2666
Male, age 74, left hemisphere
484.0
2586
Male, age 75, left hemisphere
427.9
Dorsal raphe nucleus nTPM: 593.1
2298
Female, age 72, unknown
671.8
2750
Male, age 76, both hemispheres
657.6
1828
Male, age 53, unknown
601.5
2047
Male, age 72, unknown
546.1
2016
Female, age 72, unknown
488.8
Inferior colliculus nTPM: 568.4
2097
Female, age 72, unknown
707.7
1848
Female, age 42, unknown
548.7
1890
Male, age 53, unknown
546.4
2849
Male, age 72, unknown
470.9
Median raphe nucleus nTPM: 573.3
2220
Male, age 76, midline
573.3
Periaquaductal grey, anterior nTPM: 638.8
1947
Male, age 18, unknown
662.8
2502
Female, age 75, unknown
653.4
1795
Male, age 51, unknown
600.0
Periaquaductal grey, dorsal nTPM: 533.4
2464
Female, age 72, unknown
542.2
1831
Male, age 72, unknown
542.1
1840
Male, age 53, unknown
529.8
2850
Male, age 76, both hemispheres
519.3
Periaquaductal grey, lateral nTPM: 543.7
2053
Male, age 18, unknown
590.8
2272
Male, age 74, both hemispheres
566.6
2140
Male, age 76, both hemispheres
473.9
Pretectal area nTPM: 750.9
1944
Female, age 72, unknown
1021.2
2007
Male, age 72, unknown
971.4
1817
Female, age 42, unknown
943.9
1816
Male, age 51, unknown
933.3
1815
Male, age 53, unknown
832.3
2667
Female, age 75, unknown
708.3
2224
Female, age 72, unknown
640.4
2273
Male, age 74, both hemispheres
621.5
2825
Male, age 18, unknown
535.3
2316
Male, age 76, right hemisphere
534.6
2407
Male, age 75, both hemispheres
517.7
Red nucleus nTPM: 644.2
1821
Female, age 72, unknown
853.4
2785
Male, age 18, unknown
757.9
1865
Male, age 51, unknown
692.2
2725
Female, age 75, unknown
668.8
2823
Male, age 76, right hemisphere
668.5
1954
Female, age 42, unknown
664.3
2503
Female, age 72, unknown
640.9
1904
Male, age 53, unknown
623.6
2588
Male, age 74, left hemisphere
550.6
2769
Male, age 72, unknown
541.5
2584
Male, age 75, left hemisphere
535.0
2227
Male, age 72, unknown
534.0
Substantia nigra nTPM: 632.7
1889
Female, age 72, unknown
826.4
2241
Male, age 72, unknown
751.1
2590
Female, age 75, unknown
662.1
1941
Male, age 53, unknown
655.6
1916
Female, age 42, unknown
653.4
1851
Male, age 51, unknown
637.8
2409
Female, age 72, unknown
618.4
2583
Male, age 75, right hemisphere
580.7
2665
Male, age 74, both hemispheres
538.1
2699
Male, age 18, unknown
403.3
Superior colliculus nTPM: 627.2
2087
Female, age 72, unknown
760.8
1913
Female, age 42, unknown
725.9
2587
Male, age 74, left hemisphere
715.4
2261
Male, age 18, unknown
686.3
1895
Male, age 76, right hemisphere
669.7
1995
Male, age 72, unknown
602.7
1796
Male, age 53, unknown
576.7
2668
Female, age 75, unknown
557.7
1839
Male, age 51, unknown
523.1
2664
Male, age 75, both hemispheres
453.6
Ventral tegmental area nTPM: 560.3
2410
Female, age 72, unknown
645.5
2223
Female, age 72, unknown
561.7
2218
Male, age 76, both hemispheres
548.7
1915
Female, age 42, unknown
547.5
1942
Male, age 51, unknown
532.7
2021
Male, age 53, unknown
525.6
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1118.3
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 1118.3
Samples: 139
Max nTPM: 1716.5
Min nTPM: 670.9
Std nTPM: 215.0
Median nTPM: 1079.5
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
1716.5
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
1713.5
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
1687.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
1670.3
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
1616.8
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
1583.7
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
1556.4
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
1547.5
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
1491.3
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
1485.2
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
1477.6
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
1453.9
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
1448.5
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
1435.1
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
1425.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
1418.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
1400.5
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
1378.8
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
1363.1
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
1358.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
1348.6
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
1327.7
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
1322.9
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
1322.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
1321.0
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
1313.8
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
1310.3
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
1305.6
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
1288.6
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
1279.6
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
1279.4
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
1265.3
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
1250.3
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
1248.6
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
1248.0
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
1236.4
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
1224.0
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
1220.5
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
1208.0
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
1202.3
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
1201.4
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
1187.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
1184.3
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
1181.2
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
1180.1
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
1178.4
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
1166.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
1151.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
1150.2
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
1148.6
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
1147.7
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
1146.9
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
1143.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
1138.7
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
1134.5
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
1132.9
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
1131.5
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
1130.4
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
1123.6
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
1115.7
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
1115.7
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
1115.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
1113.7
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
1110.1
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
1104.0
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
1096.3
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
1086.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
1083.4
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
1081.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
1079.5
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
1075.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
1073.6
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
1069.0
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
1066.3
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
1062.8
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
1061.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
1057.8
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
1051.4
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
1049.9
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
1048.7
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
1044.8
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
1038.5
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
1035.6
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
1032.7
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
1026.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
1022.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
1022.1
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
1019.8
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
1017.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
1015.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
1007.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
1006.0
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
1004.1
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
1002.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
1001.5
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
990.4
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
984.8
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
983.7
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
981.8
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
980.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
974.9
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
974.7
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
974.0
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
971.4
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
964.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
964.4
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
961.1
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
956.1
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
953.6
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
953.1
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
953.0
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
945.0
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
942.8
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
939.2
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
939.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
939.1
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
935.2
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
934.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
933.9
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
921.1
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
909.3
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
905.8
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
902.5
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
888.1
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
887.0
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
885.0
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
878.2
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
863.9
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
854.6
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
825.7
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
808.9
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
800.2
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
797.2
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
795.4
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
794.9
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
784.1
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
773.0
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
734.8
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
670.9
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1701.0
Mouse sample
Sample description
nTPM
Midbrain nTPM: 1701.0
Samples: 4
Max nTPM: 1731.5
Min nTPM: 1663.0
Sample A
Male
1717.4
Sample B
Male
1731.5
Sample C
Female
1691.9
Sample D
Female
1663.0
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.