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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1232.7
nTPM
HPA Brain:
714.3
nTPM
GTEx:
1232.7
nTPM
FANTOM5:
1119.9
Scaled Tags Per Million
Pig:
797.1
nTPM
Mouse:
2722.6
nTPM
Allen mouse:
21.9
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
714.3
Sample id
Sample description
nTPM
Amygdala nTPM: 714.3
2814
Male, age 76, right hemisphere
982.3
2514
Male, age 75, right hemisphere
760.9
2695
Female, age 67, right hemisphere
644.6
1987
Female, age 91, left hemisphere
594.6
2517
Female, age 94, left hemisphere
589.4
Basal amygdala nTPM: 586.6
1955
Male, age 76, both hemispheres
709.0
2110
Male, age 80, left hemisphere
701.1
2609
Male, age 75, right hemisphere
623.7
2243
Female, age 91, right hemisphere
539.9
2685
Female, age 94, left hemisphere
526.7
2827
Female, age 67, right hemisphere
418.9
Central amygdala nTPM: 623.7
1905
Male, age 76, both hemispheres
835.5
2826
Female, age 94, left hemisphere
602.7
2239
Male, age 80, left hemisphere
592.6
2515
Male, age 75, right hemisphere
550.9
2701
Female, age 91, right hemisphere
537.0
Corticomedial amygdala nTPM: 599.0
2829
Male, age 80, left hemisphere
704.0
2240
Male, age 76, both hemispheres
659.7
2428
Male, age 75, right hemisphere
655.0
2429
Female, age 94, left hemisphere
654.9
2242
Female, age 91, right hemisphere
508.1
2535
Female, age 67, right hemisphere
412.1
Lateral amygdala nTPM: 567.3
1883
Male, age 76, both hemispheres
859.7
2516
Male, age 75, right hemisphere
650.4
2534
Female, age 94, left hemisphere
594.0
2830
Female, age 67, right hemisphere
461.9
2256
Male, age 80, left hemisphere
454.8
2255
Female, age 91, right hemisphere
383.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1232.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 1232.7
Samples: 152
Max nTPM: 3202.4
Min nTPM: 632.6
Std nTPM: 404.7
Median nTPM: 1168.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
3202.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
2690.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
2604.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
2529.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
2353.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
2019.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
1975.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
1895.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
1893.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
1836.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
1800.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
1753.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
1715.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
1703.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
1692.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
1688.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
1677.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
1673.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
1670.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
1661.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
1617.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
1611.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
1589.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
1584.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
1567.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
1559.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
1551.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
1527.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
1526.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
1516.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
1500.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
1488.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
1467.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
1445.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
1433.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
1431.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
1425.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
1422.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
1406.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
1400.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
1394.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
1389.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
1384.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
1360.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
1347.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
1345.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
1333.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
1331.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
1292.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
1289.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
1288.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
1275.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
1274.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
1274.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
1247.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
1238.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
1237.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
1235.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
1231.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
1217.6
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
1215.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
1213.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
1209.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
1208.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
1205.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
1202.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
1194.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
1191.9
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
1191.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
1190.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
1189.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
1187.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
1182.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
1177.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
1173.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
1172.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
1164.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
1163.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
1153.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
1150.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
1141.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
1138.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
1136.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
1126.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
1123.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
1117.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
1116.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
1114.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
1112.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
1096.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
1096.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
1094.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
1085.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
1070.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
1067.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
1066.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
1064.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
1062.8
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
1060.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
1059.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
1056.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
1055.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
1055.4
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
1047.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
1035.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
1028.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
1015.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
1013.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
1002.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
994.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
989.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
987.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
981.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
968.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
967.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
965.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
952.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
937.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
927.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
926.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
926.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
909.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
900.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
900.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
897.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
879.4
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
878.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
867.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
860.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
856.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
851.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
847.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
844.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
833.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
828.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
827.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
823.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
795.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
779.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
775.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
763.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
753.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
752.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
748.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
740.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
725.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
722.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
722.1
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
682.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
678.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
669.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
632.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
2722.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 2722.6
Samples: 4
Max nTPM: 2895.7
Min nTPM: 2561.8
Sample A
Male
2639.1
Sample B
Male
2895.7
Sample C
Female
2793.9
Sample D
Female
2561.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.