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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A8 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
108.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
98.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
56.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
29.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
27.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
26.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
23.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
22.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
18.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
17.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
14.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
13.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
13.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
13.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
12.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
12.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
11.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
9.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
9.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
9.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
8.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
8.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
8.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
7.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
6.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
5.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
5.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
5.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
5.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
5.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
5.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
4.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
4.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
4.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
4.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
4.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
3.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
3.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
3.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
2.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
2.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
2.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
1.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
1.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
1.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
1.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A8 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
49.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
705.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
666.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
542.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
396.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
386.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
284.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
246.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
232.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
208.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
197.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
195.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
183.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
174.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
170.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
167.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
164.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
161.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
160.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
155.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
152.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
151.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
143.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
141.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
140.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
138.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
127.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
125.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
123.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
123.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
122.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
119.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
115.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
115.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
115.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
114.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
114.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
113.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
111.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
111.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
110.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
108.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
107.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
106.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
105.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
104.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
101.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
101.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
100.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
99.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
98.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
98.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
98.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
95.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
95.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
95.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
95.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
94.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
92.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
90.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
90.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
90.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
90.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
90.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
89.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
88.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
88.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
87.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
87.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
87.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
87.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
86.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
84.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
83.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
83.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
83.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
82.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
81.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
81.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
81.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
81.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
80.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
79.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
78.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
77.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
77.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
76.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
75.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
75.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
75.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
74.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
72.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
72.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
72.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
71.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
71.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
70.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
69.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
68.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
68.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
68.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
67.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
67.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
66.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
66.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
66.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
66.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
66.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
65.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
64.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
63.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
62.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
62.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
61.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
60.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
60.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
60.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
59.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
59.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
59.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
59.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
59.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
58.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
58.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
58.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
58.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
57.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
57.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
57.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
56.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
56.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
56.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
56.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
55.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
55.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
55.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
55.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
54.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
54.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
53.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
53.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
53.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
53.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
52.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
52.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
52.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
51.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
51.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
51.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
51.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
51.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
51.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
51.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
50.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
50.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
50.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
50.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
50.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
49.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
49.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
49.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
49.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
49.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
48.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
48.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
48.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
48.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
48.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
47.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
46.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
46.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
46.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
46.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
45.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
45.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
45.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
45.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
45.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
44.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
44.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
44.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
44.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
44.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
44.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
44.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
44.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
43.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
43.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
43.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
43.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
43.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
42.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
42.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
42.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
42.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
42.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
42.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
42.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
42.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
42.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
41.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
41.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
41.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
41.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
41.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
41.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
41.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
41.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
40.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
40.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
40.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
40.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
40.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
40.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
39.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
39.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
39.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
39.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
39.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
38.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
38.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
38.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
38.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
38.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
38.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
37.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
37.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
37.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
37.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
37.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
37.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
36.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
36.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
36.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
36.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
36.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
36.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
36.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
36.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
36.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
36.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
36.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
36.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
36.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
36.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
35.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
35.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
35.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
35.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
35.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
35.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
35.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
35.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
35.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
35.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
35.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
35.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
34.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
34.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
34.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
34.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
34.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
34.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
34.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
34.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
34.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
34.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
34.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
33.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
33.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
33.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
33.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
32.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
32.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
32.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
32.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
32.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
32.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
32.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
31.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
31.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
31.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
31.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
31.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
31.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
31.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
31.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
31.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
31.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
31.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
31.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
31.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
30.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
30.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
30.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
30.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
30.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
30.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
30.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
30.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
29.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
29.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
29.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
29.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
29.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
29.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
29.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
29.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
29.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
28.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
28.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
28.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
28.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
28.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
28.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
28.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
27.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
27.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
27.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
27.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
27.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
27.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
27.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
27.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
27.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
26.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
26.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
26.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
26.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
26.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
26.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
25.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
25.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
25.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
25.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
25.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
25.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
24.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
24.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
24.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
24.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
24.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
24.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
24.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
24.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
24.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
24.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
23.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
23.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
23.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
23.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
23.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
23.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
23.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
23.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
23.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
22.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
22.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
22.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
22.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
22.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
22.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
22.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
21.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
21.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
21.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
21.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
21.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
21.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
21.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
21.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
21.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
21.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
21.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
21.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
21.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
21.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
20.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
20.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
20.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
20.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
20.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
20.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
20.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
20.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
20.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
20.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
19.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
19.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
19.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
19.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
19.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
19.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
19.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
19.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
19.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
19.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
19.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
19.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
18.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
18.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
18.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
18.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
18.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
18.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
17.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
17.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
17.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
17.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
17.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
17.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
17.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
17.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
17.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
17.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
16.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
16.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
16.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
16.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
16.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
16.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
16.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
16.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
16.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
16.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
16.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
15.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
15.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
15.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
15.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
15.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
15.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
15.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
15.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
15.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
15.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
15.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
14.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
14.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
14.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
14.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
14.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
14.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
14.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
14.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
14.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
14.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
13.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
13.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
13.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
13.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
13.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
13.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
12.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
12.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
12.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
12.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
12.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
12.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
12.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
12.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
11.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
11.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
11.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
11.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
11.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
11.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
11.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
11.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
10.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
10.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
10.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
10.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
10.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
10.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
10.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
10.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
9.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
9.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
9.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
9.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
9.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
9.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
8.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
8.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
8.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
8.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
8.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
8.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
8.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
7.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
7.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
7.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
7.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
7.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
7.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
6.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
6.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
5.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
4.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
4.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
3.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
3.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
3.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
3.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
3.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
3.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
2.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
1.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
1.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
1.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A8 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
317.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
239.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
229.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
187.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
178.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
155.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
133.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
125.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
123.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
121.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
107.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
95.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
95.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
93.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
90.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
83.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
82.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
78.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
77.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
76.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
72.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
70.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
70.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
68.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
68.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
65.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
62.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
61.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
61.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
61.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
58.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
56.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
54.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
54.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
53.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
52.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
52.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
49.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
46.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
46.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
44.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
43.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
42.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
39.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
37.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
37.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
37.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
36.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
35.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
33.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
33.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
33.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
32.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
32.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
31.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
30.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
30.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
29.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
28.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
28.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
26.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
26.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
26.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
24.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
23.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
23.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
22.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
21.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
21.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
19.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
19.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
18.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
18.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
18.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
17.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
17.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
17.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
16.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
15.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
15.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
15.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
14.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
13.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
13.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
12.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
11.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
10.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
9.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
8.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
7.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
7.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
7.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
6.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
6.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
5.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
4.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
4.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A8 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
122.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
27380.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
439.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
194.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
164.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
162.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
125.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
115.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
110.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
109.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
94.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
86.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
83.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
82.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
82.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
79.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
77.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
76.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
75.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
74.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
74.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
74.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
69.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
68.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
66.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
65.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
64.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
63.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
63.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
62.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
61.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
59.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
58.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
57.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
56.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
56.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
56.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
55.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
55.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
55.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
54.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
54.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
53.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
52.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
52.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
51.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
51.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
49.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
49.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
48.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
48.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
48.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
47.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
46.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
45.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
45.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
44.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
44.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
42.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
42.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
41.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
40.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
39.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
38.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
38.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
37.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
37.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
34.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
32.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
32.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
32.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
32.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
32.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
32.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
31.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
31.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
31.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
30.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
30.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
29.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
28.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
27.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
27.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
27.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
27.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
26.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
26.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
25.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
25.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
25.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
25.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
24.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
24.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
24.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
24.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
23.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
23.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
22.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
22.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
22.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
21.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
21.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
20.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
20.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
20.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
20.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
20.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
20.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
19.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
19.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
19.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
19.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
19.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
19.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
18.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
18.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
18.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
18.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
17.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
17.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
17.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
16.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
16.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
16.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
16.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
16.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
16.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
15.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
15.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
15.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
15.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
15.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
15.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
15.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
15.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
15.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
14.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
14.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
14.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
14.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
13.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
13.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
13.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
12.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
12.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
12.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
12.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
12.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
12.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
12.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
12.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
12.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
12.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
12.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
12.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
12.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
12.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
12.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
11.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
11.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
11.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
11.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
11.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
11.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
11.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
11.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
11.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
10.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
10.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
10.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
10.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
10.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
10.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
10.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
10.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
10.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
10.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
9.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
9.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
9.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
9.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
9.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
9.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
9.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
9.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
8.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
8.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
8.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
8.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
8.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
8.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
8.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
8.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
8.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
8.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
7.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
7.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
7.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
7.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
6.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
6.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
6.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
6.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
6.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
6.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
6.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
5.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
5.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
5.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
5.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
5.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
5.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
4.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
4.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
4.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
4.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
4.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
4.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
4.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
4.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
4.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
3.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
3.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
3.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
3.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
2.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
2.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
2.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
2.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
2.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
2.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
2.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
2.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
2.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
1.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
1.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
1.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
1.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
1.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
0.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
0.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0076330003
Tumor
4.1
CPT0063630003
Tumor
2.9
CPT0081880003
Tumor
2.9
CPT0017850003
Tumor
2.6
CPT0069160003
Tumor
1.7
CPT0092290003
Tumor
1.7
CPT0002350011
Tumor
1.6
CPT0009000003
Tumor
1.5
CPT0023350003
Tumor
1.4
CPT0079410003
Tumor
1.4
CPT0014160003
Tumor
1.1
CPT0015730003
Tumor
1.1
CPT0007860003
Tumor
1.1
CPT0025050003
Tumor
1.0
CPT0077320001
Normal
1.0
CPT0063320003
Tumor
0.9
CPT0075170001
Normal
0.9
CPT0084560003
Tumor
0.9
CPT0025170003
Tumor
0.9
CPT0024670003
Tumor
0.9
CPT0077490003
Tumor
0.9
CPT0077310003
Tumor
0.9
CPT0086950003
Tumor
0.9
CPT0079230003
Tumor
0.9
CPT0075560003
Tumor
0.8
CPT0001220008
Tumor
0.8
CPT0079480003
Tumor
0.7
CPT0086970003
Normal
0.7
CPT0017410003
Tumor
0.6
CPT0019990003
Tumor
0.5
CPT0021240003
Tumor
0.5
CPT0025350003
Tumor
0.5
CPT0006630003
Tumor
0.4
CPT0092730003
Tumor
0.4
CPT0014370004
Tumor
0.4
CPT0025290003
Tumor
0.4
CPT0065930003
Tumor
0.4
CPT0086030003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0064370003
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0001540009
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0076350001
Normal
0.2
CPT0077500001
Normal
0.2
CPT0012900004
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0000870016
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0012370003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0023690003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0009020003
Normal
0.0
CPT0075130003
Tumor
-0.1
CPT0000640003
Tumor
-0.1
CPT0065690003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0001260009
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0065870003
Tumor
-0.1
CPT0088760003
Tumor
-0.1
CPT0025060001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0014450004
Tumor
-0.2
CPT0001500009
Tumor
-0.2
CPT0086870003
Tumor
-0.2
CPT0078510003
Tumor
-0.2
CPT0010120001
Normal
-0.2
CPT0077110003
Tumor
-0.2
CPT0023360001
Normal
-0.3
CPT0015810003
Tumor
-0.3
CPT0019130003
Tumor
-0.3
CPT0063330001
Normal
-0.3
CPT0017450001
Normal
-0.3
CPT0078990003
Tumor
-0.3
CPT0065820001
Normal
-0.4
CPT0000780007
Tumor
-0.4
CPT0012180003
Tumor
-0.4
CPT0089460004
Tumor
-0.4
CPT0001270001
Normal
-0.5
CPT0065430003
Tumor
-0.5
CPT0025230003
Tumor
-0.5
CPT0088630003
Tumor
-0.5
CPT0012550003
Tumor
-0.5
CPT0087050003
Normal
-0.5
CPT0092160003
Tumor
-0.5
CPT0014130001
Normal
-0.5
CPT0081600003
Tumor
-0.5
CPT0018250001
Normal
-0.6
CPT0086820003
Tumor
-0.6
CPT0001350001
Normal
-0.6
CPT0001340003
Tumor
-0.6
CPT0002270011
Tumor
-0.6
CPT0007320003
Tumor
-0.6
CPT0012080003
Tumor
-0.6
CPT0088550004
Tumor
-0.6
CPT0014470001
Normal
-0.6
CPT0065810003
Tumor
-0.6
CPT0078800003
Tumor
-0.7
CPT0089020003
Tumor
-0.7
CPT0078930003
Tumor
-0.7
CPT0001180009
Tumor
-0.7
CPT0069010001
Normal
-0.7
CPT0012670003
Tumor
-0.7
CPT0001190001
Normal
-0.7
CPT0081990003
Tumor
-0.7
CPT0079270003
Tumor
-0.7
CPT0086360003
Tumor
-0.8
CPT0001510001
Normal
-0.8
CPT0069000003
Tumor
-0.8
CPT0025880003
Tumor
-0.8
CPT0025110003
Tumor
-0.8
CPT0023710001
Normal
-0.8
CPT0077140001
Normal
-0.8
CPT0013790003
Normal
-0.8
CPT0001230001
Normal
-0.8
CPT0088970003
Tumor
-0.9
CPT0065450001
Normal
-0.9
CPT0009060003
Tumor
-0.9
CPT0092800003
Normal
-0.9
CPT0010110003
Tumor
-0.9
CPT0006530001
Normal
-0.9
CPT0012290003
Normal
-1.0
CPT0019160001
Normal
-1.0
CPT0088780001
Normal
-1.0
CPT0088900003
Tumor
-1.0
CPT0088710001
Normal
-1.0
CPT0088690003
Tumor
-1.0
CPT0085670003
Tumor
-1.0
CPT0079300001
Normal
-1.0
CPT0088640003
Normal
-1.0
CPT0078840001
Normal
-1.1
CPT0088570001
Normal
-1.1
CPT0011240003
Tumor
-1.1
CPT0015910003
Tumor
-1.1
CPT0012920003
Normal
-1.1
CPT0063640001
Normal
-1.1
CPT0092310003
Normal
-1.1
CPT0020130001
Normal
-1.1
CPT0012090003
Normal
-1.2
CPT0000790001
Normal
-1.2
CPT0066430001
Normal
-1.2
CPT0011410003
Tumor
-1.2
CPT0081620001
Normal
-1.2
CPT0078530001
Normal
-1.2
CPT0079430001
Normal
-1.2
CPT0007870001
Normal
-1.3
CPT0025610001
Normal
-1.3
CPT0089480003
Normal
-1.3
CPT0086890003
Normal
-1.3
CPT0014350001
Normal
-1.3
CPT0088480003
Tumor
-1.3
CPT0012280003
Tumor
-1.4
CPT0088920001
Normal
-1.4
CPT0069190001
Normal
-1.4
CPT0079180003
Tumor
-1.4
CPT0000660001
Normal
-1.4
CPT0012570003
Normal
-1.4
CPT0025920001
Normal
-1.4
CPT0092740003
Normal
-1.4
CPT0086830003
Normal
-1.4
CPT0089040001
Normal
-1.5
CPT0064400001
Normal
-1.5
CPT0078660003
Tumor
-1.5
CPT0000890001
Normal
-1.5
CPT0006730001
Normal
-1.5
CPT0012640003
Normal
-1.6
CPT0086370003
Normal
-1.6
CPT0009080003
Normal
-1.6
CPT0002370001
Normal
-1.7
CPT0010170001
Normal
-1.8
CPT0079000001
Normal
-1.8
CPT0006950001
Normal
-1.9
CPT0020020001
Normal
-1.9
CPT0082010001
Normal
-2.0
CPT0026420001
Normal
-2.1
CPT0078670001
Normal
-2.2
CPT0078940001
Normal
-2.2
CPT0012770003
Normal
-2.4
CPT0088500001
Normal
-2.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
