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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A8 is not prognostic in Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: 1.96
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
0.090
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
59%
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
67%
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8825.6
Number of samples
283
Samples
Sample
Description
TPM
TCGA-VS-A9UC-01A
0 years, female, stage:Stage IIB, alive, 825 days
85535.1
TCGA-MU-A8JM-01A
0 years, female, white, stage:Stage IB, alive, 607 days
57422.7
TCGA-FU-A3TQ-01A
0 years, female, white, stage:Stage IIIB, alive, 795 days
56395.0
TCGA-C5-A1BM-01A
0 years, female, black or african american, stage:Stage IB, dead, 2520 days
54447.9
TCGA-VS-A9UI-01A
0 years, female, white, stage:Stage IIB, dead, 1372 days
52209.6
TCGA-EK-A2RN-01A
0 years, female, white, stage:Stage IB, alive, 71 days
48707.8
TCGA-EA-A44S-01A
0 years, female, white, stage:Stage IIIB, alive, 369 days
48330.0
TCGA-MA-AA3X-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 617 days
45962.7
TCGA-EA-A3QE-01A
0 years, female, white, stage:Stage IB, alive, 761 days
45460.1
TCGA-FU-A3YQ-01A
0 years, female, white, stage:Stage IB, alive, 861 days
43424.1
TCGA-EK-A2RJ-01A
0 years, female, white, stage:Stage IB, alive, 53 days
42957.8
TCGA-C5-A7UI-01A
0 years, female, black or african american, stage:Stage IB, dead, 2888 days
42387.6
TCGA-EK-A2RB-01A
0 years, female, white, stage:Stage IVB, alive, 9 days
41399.0
TCGA-ZJ-AAX4-01A
0 years, female, white, stage:Stage II, alive, 21 days
41201.6
TCGA-VS-A958-01A
0 years, female, white, stage:Stage IIB, alive, 1525 days
40507.2
TCGA-IR-A3LL-01A
0 years, female, white, stage:Stage IB, alive, 1106 days
38909.3
TCGA-VS-A8EL-01A
0 years, female, black or african american, stage:Stage IIB, alive, 1992 days
37150.7
TCGA-DR-A0ZM-01A
0 years, female, white, stage:Stage IIIB, alive, 1791 days
36119.3
TCGA-VS-A8Q8-01A
0 years, female, white, stage:Stage IB, dead, 978 days
36034.4
TCGA-C5-A7UE-01A
0 years, female, white, stage:Stage IB, alive, 4738 days
35156.0
TCGA-C5-A1BL-01A
0 years, female, white, stage:Stage IB, alive, 5271 days
34322.9
TCGA-VS-A9UV-01A
0 years, female, stage:Stage IVA, dead, 104 days
34170.3
TCGA-VS-A8EG-01A
0 years, female, stage:Stage IB, alive, 1386 days
34058.9
TCGA-VS-A9U7-01A
0 years, female, white, stage:Stage IB, alive, 1472 days
33940.5
TCGA-C5-A3HL-01A
0 years, female, white, stage:Stage IB, alive, 621 days
33152.7
TCGA-DS-A5RQ-01A
0 years, female, white, stage:Stage IB, alive, 512 days
32708.3
TCGA-VS-A8QF-01A
0 years, female, white, stage:Stage IIB, alive, 1800 days
30389.4
TCGA-EK-A2RE-01A
0 years, female, white, stage:Stage IIA, alive, 57 days
29847.9
TCGA-C5-A1M7-01A
0 years, female, white, stage:Stage IB, alive, 1409 days
28952.3
TCGA-EA-A5O9-01A
0 years, female, white, stage:Stage IB, alive, 788 days
28639.6
TCGA-HM-A4S6-01A
0 years, female, white, stage:Stage IIIB, alive, 454 days
27781.9
TCGA-Q1-A6DW-01A
0 years, female, white, stage:Stage I, alive, 534 days
27038.3
TCGA-DS-A0VN-01A
0 years, female, white, stage:Stage IB, alive, 3609 days
27021.3
TCGA-EK-A2PG-01A
0 years, female, black or african american, stage:'--, alive, 46 days
25533.4
TCGA-C5-A7CH-01A
0 years, female, white, stage:Stage IIB, alive, 4694 days
25437.3
TCGA-VS-A9UM-01A
0 years, female, black or african american, stage:Stage IVB, dead, 829 days
24830.8
TCGA-HG-A2PA-01A
0 years, female, white, stage:Stage IB, dead, 773 days
24458.6
TCGA-UC-A7PG-01A
0 years, female, white, stage:Stage IIIB, dead, 370 days
24123.7
TCGA-R2-A69V-01A
0 years, female, white, stage:Stage IB, alive, 596 days
23966.7
TCGA-EA-A3HT-01A
0 years, female, white, stage:Stage IB, alive, 954 days
22231.6
TCGA-EA-A5ZD-01A
0 years, female, asian, stage:Stage IB, alive, 830 days
22004.2
TCGA-FU-A5XV-01A
0 years, female, white, stage:Stage IIIB, alive, 321 days
21628.2
TCGA-MA-AA42-01A
0 years, female, white, stage:Stage IIB, alive, 259 days
21612.0
TCGA-C5-A1MK-01A
0 years, female, white, stage:Stage IIIB, dead, 74 days
20777.4
TCGA-EK-A2GZ-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 383 days
20461.6
TCGA-C5-A7CL-01A
0 years, female, white, stage:Stage IIIB, dead, 471 days
20152.6
TCGA-DS-A1OB-01A
0 years, female, white, stage:Stage IB, dead, 861 days
19772.1
TCGA-EA-A3HR-01A
0 years, female, white, stage:Stage II, alive, 940 days
19324.4
TCGA-C5-A1M8-01A
0 years, female, white, stage:Stage IB, alive, 919 days
18367.7
TCGA-LP-A4AU-01A
0 years, female, asian, stage:Stage IIIB, alive, 343 days
18206.3
TCGA-VS-A8QM-01A
0 years, female, stage:Stage IVB, dead, 951 days
17969.3
TCGA-C5-A901-01A
0 years, female, white, stage:'--, alive, 518 days
17813.6
TCGA-DG-A2KL-01A
0 years, female, stage:Stage IIA, alive, 1367 days
17808.0
TCGA-VS-A9UY-01A
0 years, female, stage:Stage IVB, dead, 555 days
17801.3
TCGA-C5-A1MP-01A
0 years, female, black or african american, stage:Stage IB, alive, 109 days
17520.7
TCGA-MU-A51Y-01A
0 years, female, white, stage:Stage IIA, alive, 854 days
16722.3
TCGA-EA-A1QT-01A
0 years, female, white, stage:Stage IB, alive, 1243 days
15796.0
TCGA-VS-A9V3-01A
0 years, female, white, stage:Stage IVB, alive, 540 days
14353.3
TCGA-VS-A9V2-01A
0 years, female, white, stage:Stage IB, alive, 555 days
14332.2
TCGA-JW-A852-01A
0 years, female, white, stage:Stage IIB, dead, 252 days
14326.3
TCGA-VS-A94Y-01A
0 years, female, white, stage:Stage IIB, dead, 144 days
14041.1
TCGA-C5-A1MH-01A
0 years, female, white, stage:Stage IIIB, dead, 1186 days
13935.1
TCGA-JW-A5VL-01A
0 years, female, american indian or alaska native, stage:Stage IB, alive, 474 days
13871.4
TCGA-VS-A8EK-01A
0 years, female, white, stage:Stage IVA, dead, 829 days
13462.3
TCGA-MY-A5BF-01A
0 years, female, white, stage:Stage IIA, alive, 634 days
13351.9
TCGA-XS-A8TJ-01A
0 years, female, black or african american, stage:Stage IB, alive, 890 days
13236.9
TCGA-EA-A78R-01A
0 years, female, asian, stage:Stage IB, alive, 410 days
12515.5
TCGA-VS-A9UU-01A
0 years, female, stage:Stage IIB, alive, 442 days
11846.6
TCGA-ZJ-A8QR-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage I, dead, 582 days
11559.8
TCGA-JW-A5VJ-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 652 days
11245.9
TCGA-EK-A3GJ-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IB, alive, 3 days
11065.1
TCGA-EX-A69M-01A
0 years, female, white, stage:Stage IB, dead, 253 days
10931.1
TCGA-LP-A5U3-01A
0 years, female, asian, stage:Stage IB, alive, 25 days
10677.2
TCGA-VS-A950-01A
0 years, female, stage:Stage IIIA, alive, 1221 days
10378.6
TCGA-VS-AA62-01A
0 years, female, white, stage:Stage IIB, dead, 469 days
10303.2
TCGA-EK-A2PL-01A
0 years, female, white, stage:Stage IIIB, alive, 13 days
10170.9
TCGA-UC-A7PD-01A
0 years, female, american indian or alaska native, stage:Stage IB, dead, 355 days
9996.2
TCGA-EK-A2RC-01A
0 years, female, stage:Stage IB, alive, 129 days
9782.0
TCGA-Q1-A73O-01A
0 years, female, stage:Stage IB, alive, 428 days
9756.5
TCGA-Q1-A5R2-01A
0 years, female, white, stage:'--, alive, 499 days
9468.7
TCGA-MA-AA3Y-01A
0 years, female, white, stage:Stage IB, alive, 542 days
9432.4
TCGA-Q1-A6DT-01A
0 years, female, white, stage:Stage I, dead, 275 days
9202.8
TCGA-FU-A3HY-01A
0 years, female, white, stage:Stage IB, alive, 954 days
8668.9
TCGA-C5-A7XC-01A
0 years, female, white, stage:Stage IB, alive, 1551 days
8652.4
TCGA-C5-A1M5-01A
0 years, female, white, stage:Stage IB, dead, 2052 days
8580.3
TCGA-DS-A7WI-01A
0 years, female, white, stage:Stage IIA, dead, 252 days
8379.2
TCGA-C5-A2LY-01A
0 years, female, white, stage:Stage IB, alive, 2383 days
8216.2
TCGA-EK-A2RO-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 2 days
8154.4
TCGA-C5-A1BJ-01A
0 years, female, white, stage:Stage IIB, alive, 4385 days
7762.8
TCGA-ZX-AA5X-01A
0 years, female, white, stage:Stage IIIB, alive, 119 days
7651.7
TCGA-IR-A3LC-01A
0 years, female, white, stage:Stage IB, alive, 3935 days
7626.6
TCGA-C5-A7CJ-01A
0 years, female, white, stage:Stage IIA, dead, 3097 days
7495.4
TCGA-JW-A5VK-01A
0 years, female, black or african american, stage:Stage IB, alive, 623 days
7372.6
TCGA-EK-A2H0-01A
0 years, female, white, stage:Stage IIB, alive, 1847 days
7085.7
TCGA-MA-AA43-01A
0 years, female, white, stage:Stage IIIB, alive, 346 days
7051.3
TCGA-BI-A0VR-01A
0 years, female, white, stage:Stage IIIB, alive, 1505 days
7012.8
TCGA-VS-A9U6-01A
0 years, female, white, stage:Stage IVB, alive, 1320 days
6620.5
TCGA-4J-AA1J-01A
0 years, female, white, stage:Stage IB, alive, 542 days
6503.3
TCGA-JW-A5VI-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 747 days
6291.4
TCGA-VS-A9UH-01A
0 years, female, black or african american, stage:Stage IVA, alive, 1427 days
6251.4
TCGA-C5-A7CO-01A
0 years, female, white, stage:Stage IB, alive, 4482 days
6212.4
TCGA-C5-A8XI-01A
0 years, female, black or african american, stage:Stage IB, alive, 254 days
6131.0
TCGA-VS-A8QC-01A
0 years, female, white, stage:Stage IVA, dead, 350 days
6064.5
TCGA-MA-AA41-01A
0 years, female, white, stage:Stage IIB, alive, 279 days
5863.8
TCGA-EA-A97N-01A
0 years, female, white, stage:Stage IB, alive, 11 days
5764.4
TCGA-DG-A2KM-01A
0 years, female, stage:Stage IB, alive, 1946 days
5625.6
TCGA-UC-A7PF-01A
0 years, female, stage:Stage IB, dead, 2859 days
5350.7
TCGA-VS-A957-01A
0 years, female, white, stage:Stage IB, alive, 1688 days
5279.5
TCGA-JX-A3Q0-01A
0 years, female, black or african american, stage:Stage III, alive, 6375 days
5242.8
TCGA-C5-A2LZ-01A
0 years, female, white, stage:Stage IIIB, dead, 3046 days
5081.4
TCGA-EA-A50E-01A
0 years, female, asian, stage:Stage IVA, dead, 227 days
4932.5
TCGA-JW-AAVH-01A
0 years, female, white, stage:Stage IB, alive, 552 days
4560.8
TCGA-C5-A7UH-01A
0 years, female, white, stage:Stage IIIB, alive, 3988 days
4132.5
TCGA-VS-A8EH-01A
0 years, female, stage:Stage IIIB, alive, 986 days
4074.4
TCGA-EX-A69L-01A
0 years, female, asian, stage:Stage IB, alive, 602 days
4044.5
TCGA-EK-A2IP-01A
0 years, female, white, stage:Stage IB, alive, 202 days
4027.3
TCGA-EA-A43B-01A
0 years, female, white, stage:Stage IB, alive, 791 days
3985.9
TCGA-EK-A2RK-01A
0 years, female, white, stage:Stage IA, alive, 13 days
3929.4
TCGA-EK-A2RA-01A
0 years, female, stage:Stage IIA, alive, 1246 days
3801.7
TCGA-DS-A0VL-01A
0 years, female, white, stage:Stage IB, dead, 1692 days
3777.6
TCGA-RA-A741-01A
0 years, female, white, stage:Stage IIB, alive, 444 days
3632.7
TCGA-EK-A2PI-01A
0 years, female, white, stage:Stage IIIB, alive, 586 days
3590.4
TCGA-Q1-A5R3-01A
0 years, female, white, stage:'--, alive, 485 days
3526.2
TCGA-C5-A1MN-01A
0 years, female, white, stage:Stage IIIB, dead, 1245 days
3517.0
TCGA-ZJ-AAXU-01A
0 years, female, white, stage:Stage IIB, alive, 5 days
3361.1
TCGA-EA-A3Y4-01A
0 years, female, white, stage:Stage IB, alive, 1122 days
3329.3
TCGA-DS-A1OC-01A
0 years, female, white, stage:Stage IB, alive, 376 days
3289.8
TCGA-LP-A4AW-01A
0 years, female, asian, stage:Stage IA, alive, 27 days
3266.1
TCGA-EA-A3HS-01A
0 years, female, white, stage:Stage IB, alive, 959 days
3247.9
TCGA-EK-A2PM-01A
0 years, female, white, stage:Stage IIB, alive, 18 days
3222.5
TCGA-C5-A8YQ-01A
0 years, female, white, stage:Stage IB, dead, 715 days
3140.3
TCGA-VS-A94X-01A
0 years, female, black or african american, stage:Stage IIB, dead, 506 days
3085.9
TCGA-DS-A1OA-01A
0 years, female, asian, stage:Stage IB, dead, 879 days
2918.0
TCGA-FU-A3WB-01A
0 years, female, white, stage:Stage IIA, alive, 491 days
2884.6
TCGA-ZJ-A8QQ-01A
0 years, female, white, stage:Stage IIB, alive, 2056 days
2868.5
TCGA-MA-AA3Z-01A
0 years, female, white, stage:Stage IB, alive, 595 days
2839.1
TCGA-EX-A3L1-01A
0 years, female, white, stage:Stage IIA, alive, 463 days
2809.9
TCGA-DS-A1O9-01A
0 years, female, white, stage:Stage IVA, dead, 266 days
2763.4
TCGA-EA-A6QX-01A
0 years, female, asian, stage:Stage IIIB, alive, 730 days
2693.3
TCGA-JX-A5QV-01A
0 years, female, white, stage:Stage IB, alive, 636 days
2631.0
TCGA-C5-A905-01A
0 years, female, black or african american, stage:Stage IB, alive, 4879 days
2549.9
TCGA-C5-A8XK-01A
0 years, female, black or african american, stage:'--, alive, 3039 days
2513.1
TCGA-C5-A8XH-01A
0 years, female, white, stage:Stage IB, dead, 1394 days
2317.5
TCGA-C5-A1MQ-01A
0 years, female, white, stage:Stage IIA, alive, 1031 days
2299.2
TCGA-VS-A959-01A
0 years, female, stage:Stage IIB, alive, 1561 days
2264.3
TCGA-EK-A2H1-01A
0 years, female, white, stage:Stage IB, alive, 799 days
2214.2
TCGA-DG-A2KK-01A
0 years, female, stage:Stage IIIB, alive, 2496 days
2095.1
TCGA-VS-A8Q9-01A
0 years, female, white, stage:Stage IB, alive, 1630 days
2070.0
TCGA-VS-A94Z-01A
0 years, female, white, stage:Stage IIB, alive, 1015 days
2062.1
TCGA-IR-A3L7-01A
0 years, female, white, stage:Stage IB, alive, 4483 days
2056.2
TCGA-FU-A3NI-01A
0 years, female, white, stage:Stage IB, dead, 638 days
2010.3
TCGA-VS-A8EI-01A
0 years, female, white, stage:Stage IIB, alive, 729 days
1956.3
TCGA-C5-A3HF-01A
0 years, female, white, stage:Stage IB, dead, 543 days
1940.5
TCGA-DR-A0ZL-01A
0 years, female, asian, stage:Stage IB, alive, 2669 days
1927.4
TCGA-C5-A1ML-01A
0 years, female, white, stage:Stage IB, dead, 636 days
1841.2
TCGA-EA-A3QD-01A
0 years, female, white, stage:Stage IIIB, alive, 397 days
1838.8
TCGA-GH-A9DA-01A
0 years, female, white, stage:Stage IB, alive, 540 days
1762.5
TCGA-VS-A94W-01A
0 years, female, white, stage:Stage IIB, alive, 1243 days
1724.4
TCGA-WL-A834-01A
0 years, female, white, stage:'--, alive, 791 days
1672.7
TCGA-Q1-A73Q-01A
0 years, female, white, stage:Stage I, alive, 284 days
1651.8
TCGA-C5-A7UC-01A
0 years, female, white, stage:Stage IB, dead, 523 days
1644.1
TCGA-FU-A2QG-01A
0 years, female, white, stage:Stage IB, alive, 579 days
1580.6
TCGA-C5-A7X5-01A
0 years, female, black or african american, stage:Stage IVB, dead, 414 days
1546.3
TCGA-EA-A411-01A
0 years, female, white, stage:Stage IB, alive, 747 days
1530.4
TCGA-EA-A3HU-01A
0 years, female, white, stage:Stage II, alive, 1013 days
1527.5
TCGA-Q1-A73S-01A
0 years, female, white, stage:Stage IB, alive, 688 days
1511.1
TCGA-C5-A1M9-01A
0 years, female, white, stage:Stage IB, dead, 1065 days
1433.5
TCGA-FU-A23L-01A
0 years, female, white, stage:Stage IIA, alive, 725 days
1344.1
TCGA-EA-A3HQ-01A
0 years, female, white, stage:Stage II, alive, 1136 days
1340.4
TCGA-DS-A0VM-01A
0 years, female, white, stage:Stage IB, alive, 3589 days
1338.0
TCGA-C5-A902-01A
0 years, female, black or african american, stage:Stage IB, alive, 149 days
1295.1
TCGA-HM-A3JJ-01A
0 years, female, black or african american, stage:Stage IB, dead, 659 days
1200.5
TCGA-LP-A4AX-01A
0 years, female, asian, stage:Stage IB, alive, 380 days
1097.5
TCGA-VS-A9UD-01A
0 years, female, white, stage:Stage IIIA, alive, 739 days
954.6
TCGA-MY-A5BE-01A
0 years, female, black or african american, stage:Stage IB, alive, 1066 days
940.2
TCGA-MA-AA3W-01A
0 years, female, white, stage:Stage IB, alive, 685 days
892.1
TCGA-VS-A953-01A
0 years, female, stage:Stage IVA, dead, 477 days
835.8
TCGA-C5-A8ZZ-01A
0 years, female, white, stage:Stage IIB, alive, 636 days
749.6
TCGA-DS-A3LQ-01A
0 years, female, stage:Stage IIIB, alive, 699 days
701.3
TCGA-VS-A9UB-01A
0 years, female, stage:Stage IIB, alive, 911 days
687.6
TCGA-IR-A3LK-01A
0 years, female, white, stage:Stage IB, dead, 908 days
660.7
TCGA-VS-A954-01A
0 years, female, stage:Stage IIIB, alive, 1714 days
654.9
TCGA-EX-A1H5-01A
0 years, female, black or african american, stage:Stage IIB, alive, 619 days
574.4
TCGA-BI-A0VS-01A
0 years, female, white, stage:Stage IB, alive, 1735 days
573.4
TCGA-JX-A3PZ-01A
0 years, female, white, stage:Stage IB, dead, 642 days
555.0
TCGA-EK-A3GK-01A
0 years, female, white, stage:Stage IB, alive, 15 days
529.5
TCGA-VS-A9U5-01A
0 years, female, white, stage:Stage IIB, alive, 1535 days
518.9
TCGA-VS-A8EB-01A
0 years, female, white, stage:Stage IIIB, dead, 305 days
505.3
TCGA-C5-A7CK-01A
0 years, female, white, stage:Stage IVA, dead, 4086 days
499.9
TCGA-MY-A913-01A
0 years, female, black or african american, stage:Stage IIA, alive, 524 days
494.5
TCGA-VS-A8EC-01A
0 years, female, white, stage:Stage IIIB, alive, 1415 days
483.9
TCGA-C5-A7CG-01A
0 years, female, white, stage:Stage IB, alive, 6408 days
477.3
TCGA-C5-A1ME-01A
0 years, female, white, stage:Stage IB, alive, 1756 days
476.0
TCGA-C5-A8YR-01A
0 years, female, white, stage:Stage IB, dead, 837 days
444.0
TCGA-C5-A2LX-01A
0 years, female, white, stage:Stage IB, alive, 2526 days
403.9
TCGA-EK-A2R8-01A
0 years, female, white, stage:Stage IB, alive, 44 days
398.9
TCGA-C5-A1M6-01A
0 years, female, white, stage:Stage IIB, dead, 955 days
377.0
TCGA-HM-A3JK-01A
0 years, female, white, stage:Stage IIA, alive, 632 days
371.1
TCGA-EK-A2RM-01A
0 years, female, white, stage:Stage IB, alive, 50 days
349.7
TCGA-C5-A0TN-01A
0 years, female, black or african american, stage:Stage IB, dead, 348 days
341.6
TCGA-VS-A9UL-01A
0 years, female, white, stage:Stage IIIB, dead, 442 days
338.2
TCGA-C5-A8XJ-01A
0 years, female, white, stage:Stage IB, alive, 4467 days
333.3
TCGA-MU-A5YI-01A
0 years, female, black or african american, stage:Stage IA, alive, 1053 days
317.5
TCGA-FU-A3TX-01A
0 years, female, stage:Stage IB, alive, 45 days
297.8
TCGA-BI-A20A-01A
0 years, female, white, stage:Stage IB, alive, 720 days
239.4
TCGA-EA-A5FO-01A
0 years, female, white, stage:Stage IB, alive, 815 days
234.5
TCGA-VS-A9UJ-01A
0 years, female, stage:Stage IIB, dead, 52 days
232.3
TCGA-UC-A7PI-01A
0 years, female, white, stage:Stage IB, alive, 2114 days
227.3
TCGA-FU-A23K-01A
0 years, female, white, stage:Stage IIIB, alive, 372 days
227.3
TCGA-EK-A3GN-01A
0 years, female, white, stage:Stage IIIB, alive, 27 days
219.9
TCGA-VS-A9UP-01A
0 years, female, stage:Stage IIA, alive, 1444 days
217.6
TCGA-LP-A5U2-01A
0 years, female, asian, stage:Stage IIIB, alive, 9 days
195.1
TCGA-DS-A0VK-01A
0 years, female, white, stage:Stage IB, dead, 1118 days
191.1
TCGA-EA-A1QS-01A
0 years, female, white, stage:Stage IB, alive, 1203 days
184.8
TCGA-C5-A907-01A
0 years, female, white, stage:Stage IB, alive, 448 days
175.1
TCGA-IR-A3LH-01A
0 years, female, black or african american, stage:Stage IIA, alive, 2394 days
174.5
TCGA-FU-A770-01A
0 years, female, white, stage:Stage IIIB, alive, 34 days
161.6
TCGA-IR-A3LB-01A
0 years, female, white, stage:Stage IB, dead, 2032 days
157.0
TCGA-C5-A2LT-01A
0 years, female, white, stage:Stage IB, alive, 2226 days
154.3
TCGA-VS-A9V4-01A
0 years, female, white, stage:Stage IVA, dead, 132 days
141.1
TCGA-VS-A8EJ-01A
0 years, female, white, stage:Stage IIB, dead, 607 days
139.6
TCGA-DS-A7WH-01A
0 years, female, white, stage:Stage IB, alive, 533 days
136.5
TCGA-VS-A8QH-01A
0 years, female, white, stage:Stage IB, dead, 1210 days
124.2
TCGA-EK-A2R7-01A
0 years, female, white, stage:Stage IB, alive, 27 days
117.4
TCGA-VS-A9V1-01A
0 years, female, white, stage:Stage IVB, dead, 157 days
116.7
TCGA-ZJ-AAXA-01A
0 years, female, white, stage:Stage IB, alive, 43 days
114.9
TCGA-C5-A2M1-01A
0 years, female, white, stage:Stage IB, alive, 1169 days
111.6
TCGA-LP-A7HU-01A
0 years, female, asian, stage:Stage II, alive, 406 days
109.1
TCGA-JW-A5VG-01A
0 years, female, american indian or alaska native, stage:Stage IIA, alive, 834 days
100.7
TCGA-Q1-A6DV-01A
0 years, female, asian, stage:Stage IB, alive, 491 days
97.9
TCGA-DS-A1OD-01A
0 years, female, white, stage:Stage IB, alive, 3874 days
97.5
TCGA-IR-A3LA-01A
0 years, female, white, stage:Stage IB, alive, 4172 days
97.3
TCGA-JW-A5VH-01A
0 years, female, american indian or alaska native, stage:Stage IVB, dead, 100 days
85.3
TCGA-EA-A5ZE-01A
0 years, female, asian, stage:Stage IB, alive, 829 days
83.5
TCGA-DG-A2KJ-01A
0 years, female, stage:Stage IIIB, alive, 2893 days
82.3
TCGA-VS-A9V0-01A
0 years, female, stage:Stage IB, alive, 573 days
82.0
TCGA-Q1-A73P-01A
0 years, female, white, stage:Stage IB, alive, 483 days
81.0
TCGA-C5-A7CM-01A
0 years, female, white, stage:Stage IB, alive, 619 days
80.0
TCGA-EA-A556-01A
0 years, female, white, stage:Stage IB, alive, 453 days
76.5
TCGA-VS-A9UZ-01A
0 years, female, white, stage:Stage IB, alive, 2044 days
75.9
TCGA-C5-A3HE-01A
0 years, female, white, stage:Stage IB, alive, 548 days
73.1
TCGA-C5-A1MI-01A
0 years, female, white, stage:Stage IB, dead, 1083 days
70.2
TCGA-FU-A40J-01A
0 years, female, white, stage:Stage IIIB, alive, 426 days
66.8
TCGA-EK-A2PK-01A
0 years, female, white, stage:Stage IB, alive, 12 days
66.1
TCGA-VS-A9UT-01A
0 years, female, asian, stage:Stage IB, alive, 482 days
64.5
TCGA-EA-A4BA-01A
0 years, female, white, stage:Stage IB, alive, 755 days
63.5
TCGA-VS-A9V5-01A
0 years, female, white, stage:Stage IIB, dead, 494 days
61.1
TCGA-C5-A1MF-01A
0 years, female, white, stage:Stage IB, alive, 1617 days
59.4
TCGA-VS-A9UR-01A
0 years, female, white, stage:Stage IIA, alive, 793 days
58.0
TCGA-C5-A8YT-01A
0 years, female, white, stage:Stage IB, dead, 633 days
56.7
TCGA-VS-A8QA-01A
0 years, female, stage:Stage IB, alive, 1099 days
54.3
TCGA-C5-A2LV-01A
0 years, female, black or african american, stage:Stage IB, alive, 2234 days
53.4
TCGA-HM-A6W2-01A
0 years, female, black or african american, stage:Stage IVB, alive, 287 days
47.2
TCGA-EK-A2RL-01A
0 years, female, black or african american, stage:Stage IB, dead, 1453 days
42.5
TCGA-C5-A7X8-01A
0 years, female, white, stage:Stage IB, alive, 83 days
41.3
TCGA-FU-A3EO-01A
0 years, female, white, stage:Stage IIB, alive, 490 days
38.9
TCGA-C5-A7X3-01A
0 years, female, white, stage:Stage IIIB, dead, 284 days
37.4
TCGA-2W-A8YY-01A
0 years, female, white, stage:Stage IB, alive, 533 days
35.7
TCGA-EX-A8YF-01A
0 years, female, white, stage:Stage IB, alive, 473 days
34.9
TCGA-IR-A3LI-01A
0 years, female, white, stage:Stage IVB, alive, 2493 days
33.2
TCGA-DG-A2KH-01A
0 years, female, stage:Stage IB, alive, 34 days
32.8
TCGA-MY-A5BD-01A
0 years, female, white, stage:Stage IIB, alive, 1667 days
32.3
TCGA-C5-A1MJ-01A
0 years, female, white, stage:Stage IB, dead, 14 days
31.3
TCGA-Q1-A73R-01A
0 years, female, white, stage:Stage I, alive, 567 days
29.4
TCGA-EK-A2IR-01A
0 years, female, white, stage:Stage IB, alive, 3442 days
27.1
TCGA-DS-A7WF-01A
0 years, female, stage:Stage IB, dead, 492 days
25.9
TCGA-EA-A410-01A
0 years, female, white, stage:Stage IIA, alive, 803 days
23.8
TCGA-Q1-A5R1-01A
0 years, female, white, stage:Stage IB, alive, 474 days
23.7
TCGA-FU-A57G-01A
0 years, female, white, stage:Stage IB, alive, 1078 days
23.2
TCGA-C5-A2M2-01A
0 years, female, white, stage:Stage IB, dead, 1011 days
21.1
TCGA-VS-A9UQ-01A
0 years, female, stage:Stage IB, alive, 1263 days
16.9
TCGA-EA-A439-01A
0 years, female, asian, stage:Stage IIA, alive, 965 days
14.6
TCGA-JX-A3Q8-01A
0 years, female, asian, stage:Stage IB, alive, 1357 days
14.4
TCGA-EK-A2R9-01A
0 years, female, white, stage:Stage IB, alive, 4 days
13.9
TCGA-VS-A952-01A
0 years, female, white, stage:Stage IB, alive, 1778 days
11.3
TCGA-EA-A5ZF-01A
0 years, female, asian, stage:Stage IB, alive, 828 days
11.2
TCGA-VS-A9UO-01A
0 years, female, white, stage:Stage IIB, alive, 1456 days
9.2
TCGA-IR-A3LF-01A
0 years, female, white, stage:Stage IB, alive, 2949 days
8.5
TCGA-JW-A69B-01A
0 years, female, white, stage:Stage IB, alive, 863 days
8.1
TCGA-C5-A2LS-01A
0 years, female, white, stage:Stage IB, alive, 1345 days
7.0
TCGA-EX-A449-01A
0 years, female, white, stage:Stage IVB, alive, 447 days
5.7
TCGA-PN-A8MA-01A
0 years, female, black or african american, stage:Stage IIB, alive, 90 days
0.0
TCGA-FU-A3HZ-01A
0 years, female, white, stage:Stage IIA, alive, 1103 days
0.0
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CERVICAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.