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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PGD is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
46.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
87.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
85.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
74.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
74.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
72.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
69.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
68.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
67.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
66.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
64.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
64.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
63.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
61.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
59.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
56.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
56.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
54.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
53.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
53.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
52.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
51.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
51.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
49.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
49.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
49.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
48.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
47.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
47.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
47.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
46.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
44.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
44.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
43.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
43.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
43.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
42.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
42.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
41.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
41.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
40.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
40.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
39.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
39.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
39.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
38.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
37.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
37.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
34.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
32.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
32.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
31.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
31.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
30.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
29.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
29.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
29.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
29.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
28.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
24.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
22.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
19.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
18.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
17.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PGD is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
128.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
114.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
105.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
96.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
94.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
92.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
82.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
78.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
76.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
75.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
71.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
71.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
69.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
68.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
68.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
68.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
66.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
63.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
63.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
61.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
61.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
60.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
60.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
59.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
59.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
59.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
58.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
57.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
57.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
57.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
56.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
56.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
55.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
55.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
55.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
54.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
54.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
54.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
53.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
53.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
53.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
52.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
52.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
51.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
51.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
51.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
51.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
50.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
50.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
50.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
49.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
49.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
49.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
48.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
48.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
48.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
47.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
47.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
47.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
47.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
47.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
47.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
47.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
46.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
46.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
46.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
46.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
46.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
46.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
46.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
46.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
45.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
45.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
45.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
45.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
45.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
44.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
44.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
44.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
44.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
44.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
44.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
44.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
43.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
43.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
43.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
43.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
43.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
43.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
43.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
43.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
42.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
42.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
42.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
42.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
42.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
42.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
42.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
41.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
41.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
41.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
41.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
41.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
41.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
41.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
41.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
41.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
41.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
41.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
41.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
41.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
41.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
41.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
41.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
40.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
40.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
40.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
40.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
40.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
40.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
40.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
40.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
40.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
40.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
40.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
40.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
40.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
40.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
40.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
40.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
40.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
39.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
39.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
39.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
39.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
39.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
39.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
39.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
39.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
39.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
39.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
39.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
38.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
38.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
38.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
38.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
38.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
38.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
38.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
38.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
38.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
37.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
37.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
37.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
37.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
37.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
37.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
37.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
37.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
37.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
37.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
36.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
36.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
36.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
36.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
36.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
36.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
36.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
36.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
36.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
36.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
36.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
36.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
36.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
35.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
35.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
35.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
35.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
35.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
35.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
35.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
35.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
35.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
35.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
35.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
35.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
35.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
35.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
35.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
34.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
34.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
34.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
34.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
34.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
34.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
34.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
34.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
34.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
34.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
34.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
34.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
34.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
34.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
34.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
34.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
34.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
34.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
34.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
34.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
34.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
34.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
34.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
34.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
34.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
33.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
33.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
33.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
33.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
33.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
33.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
33.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
33.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
33.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
33.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
33.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
33.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
33.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
33.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
33.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
33.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
33.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
33.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
33.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
33.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
33.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
33.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
32.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
32.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
32.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
32.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
32.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
32.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
32.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
32.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
32.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
32.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
32.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
32.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
31.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
31.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
31.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
31.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
31.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
31.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
31.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
31.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
31.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
31.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
31.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
31.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
31.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
31.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
31.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
31.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
31.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
31.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
31.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
30.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
30.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
30.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
30.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
30.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
30.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
30.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
30.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
30.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
30.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
30.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
30.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
30.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
30.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
30.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
30.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
30.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
30.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
30.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
30.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
29.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
29.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
29.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
29.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
29.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
29.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
29.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
29.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
29.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
29.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
29.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
29.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
29.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
29.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
29.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
29.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
29.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
28.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
28.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
28.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
28.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
28.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
28.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
28.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
28.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
28.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
28.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
28.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
28.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
28.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
28.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
28.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
28.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
28.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
28.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
27.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
27.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
27.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
27.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
27.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
27.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
27.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
27.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
27.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
27.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
26.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
26.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
26.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
26.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
26.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
26.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
26.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
26.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
26.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
26.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
26.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
26.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
26.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
26.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
26.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
26.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
26.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
26.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
26.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
26.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
26.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
26.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
26.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
25.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
25.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
25.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
25.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
25.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
25.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
25.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
25.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
25.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
25.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
25.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
25.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
25.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
25.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
25.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
25.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
25.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
25.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
25.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
25.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
24.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
24.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
24.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
24.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
24.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
24.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
24.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
24.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
24.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
24.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
24.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
24.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
24.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
24.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
23.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
23.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
23.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
23.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
23.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
23.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
23.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
23.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
23.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
22.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
22.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
22.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
22.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
22.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
22.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
22.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
22.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
22.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
22.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
22.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
22.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
22.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
21.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
21.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
21.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
21.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
21.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
21.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
21.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
21.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
21.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
21.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
20.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
20.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
20.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
20.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
20.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
20.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
20.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
20.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
20.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
20.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
20.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
20.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
20.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
19.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
19.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
19.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
19.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
19.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
19.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
19.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
19.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
19.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
19.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
19.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
18.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
18.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
18.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
18.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
18.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
18.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
18.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
18.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
18.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
18.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
18.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
18.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
18.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
18.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
17.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
17.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
17.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
17.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
17.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
17.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
17.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
17.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
17.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
17.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
17.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
17.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
17.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
16.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
16.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
16.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
16.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
16.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
16.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
16.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
16.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
16.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
16.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
15.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
15.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
15.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
15.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
15.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
15.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
15.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
15.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
14.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
14.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
14.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
14.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
14.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
14.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
14.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
14.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
13.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
13.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
13.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
13.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
13.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
13.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
12.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
12.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
12.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
11.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
11.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
11.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
11.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
10.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
9.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
9.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
9.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
9.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
9.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PGD is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
114.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
76.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
75.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
65.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
60.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
57.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
54.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
52.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
52.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
49.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
48.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
48.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
47.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
46.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
46.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
46.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
45.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
43.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
42.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
41.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
41.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
41.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
40.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
39.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
39.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
39.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
38.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
38.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
38.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
38.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
38.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
37.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
36.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
35.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
35.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
34.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
34.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
34.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
33.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
33.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
32.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
32.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
32.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
32.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
31.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
31.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
31.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
31.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
30.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
30.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
30.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
30.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
30.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
30.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
29.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
29.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
29.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
29.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
28.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
28.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
28.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
28.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
28.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
27.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
27.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
26.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
26.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
26.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
26.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
25.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
25.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
25.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
25.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
24.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
24.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
24.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
23.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
23.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
23.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
22.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
21.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
20.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
20.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
20.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
19.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
18.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
18.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
18.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
18.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
18.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
17.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
16.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
16.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
15.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
12.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
12.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
11.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PGD is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
66.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
991.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
232.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
188.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
182.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
171.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
171.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
164.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
149.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
137.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
133.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
131.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
125.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
125.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
124.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
118.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
113.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
111.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
110.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
105.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
104.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
104.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
103.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
99.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
99.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
98.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
98.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
97.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
96.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
95.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
94.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
93.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
92.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
91.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
90.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
89.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
89.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
87.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
87.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
86.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
86.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
85.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
85.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
85.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
84.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
84.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
84.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
82.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
82.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
82.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
82.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
82.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
82.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
81.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
81.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
80.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
80.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
80.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
79.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
79.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
78.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
78.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
78.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
77.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
77.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
76.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
75.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
75.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
75.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
75.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
74.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
74.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
73.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
73.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
73.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
72.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
72.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
71.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
71.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
71.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
71.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
70.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
70.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
69.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
69.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
69.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
69.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
69.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
69.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
68.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
68.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
68.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
68.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
67.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
67.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
66.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
66.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
66.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
66.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
65.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
65.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
65.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
65.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
64.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
64.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
64.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
64.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
64.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
64.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
63.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
63.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
63.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
63.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
63.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
63.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
62.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
62.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
62.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
62.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
62.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
62.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
62.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
62.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
62.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
61.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
61.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
61.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
61.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
61.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
60.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
60.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
60.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
59.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
59.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
59.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
59.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
58.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
58.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
58.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
58.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
58.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
57.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
57.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
57.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
57.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
57.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
57.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
57.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
57.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
56.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
56.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
56.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
56.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
56.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
55.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
55.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
54.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
54.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
54.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
54.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
54.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
53.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
53.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
52.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
52.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
52.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
52.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
51.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
51.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
51.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
51.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
51.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
51.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
51.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
51.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
50.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
50.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
50.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
50.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
50.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
50.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
50.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
50.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
50.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
50.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
49.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
49.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
49.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
49.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
49.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
49.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
48.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
48.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
48.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
48.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
48.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
47.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
47.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
47.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
47.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
47.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
47.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
46.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
46.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
46.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
46.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
46.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
46.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
46.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
45.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
45.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
45.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
45.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
45.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
44.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
44.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
44.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
44.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
43.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
43.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
43.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
43.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
43.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
43.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
42.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
42.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
42.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
42.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
42.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
42.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
42.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
41.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
41.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
41.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
40.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
40.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
40.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
40.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
39.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
39.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
39.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
39.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
39.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
38.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
38.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
38.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
38.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
37.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
37.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
36.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
34.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
34.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
34.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
33.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
33.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
32.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
32.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
32.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
32.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
31.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
31.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
30.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
30.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
29.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
29.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
28.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
28.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
27.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
27.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
27.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
26.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
26.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
25.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
24.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
24.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
23.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
23.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
22.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
22.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
22.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
21.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
20.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
17.4
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0081880003
Tumor
1.5
CPT0088550004
Tumor
0.9
CPT0076330003
Tumor
0.7
CPT0078510003
Tumor
0.7
CPT0012180003
Tumor
0.5
CPT0017850003
Tumor
0.5
CPT0014160003
Tumor
0.5
CPT0092290003
Tumor
0.5
CPT0078800003
Tumor
0.5
CPT0002270011
Tumor
0.4
CPT0007860003
Tumor
0.4
CPT0075560003
Tumor
0.4
CPT0025290003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0075130003
Tumor
0.3
CPT0014350001
Normal
0.3
CPT0025170003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0084560003
Tumor
0.3
CPT0017450001
Normal
0.3
CPT0021240003
Tumor
0.3
CPT0012770003
Normal
0.3
CPT0088780001
Normal
0.3
CPT0001340003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0011410003
Tumor
0.2
CPT0066430001
Normal
0.2
CPT0065450001
Normal
0.2
CPT0075170001
Normal
0.2
CPT0063330001
Normal
0.2
CPT0020120003
Tumor
0.2
CPT0001190001
Normal
0.2
CPT0088500001
Normal
0.2
CPT0088640003
Normal
0.2
CPT0078670001
Normal
0.2
CPT0079430001
Normal
0.2
CPT0088970003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0023360001
Normal
0.2
CPT0012920003
Normal
0.2
CPT0001230001
Normal
0.2
CPT0082010001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0006730001
Normal
0.2
CPT0009080003
Normal
0.2
CPT0087050003
Normal
0.2
CPT0012640003
Normal
0.2
CPT0012570003
Normal
0.2
CPT0076350001
Normal
0.2
CPT0077500001
Normal
0.2
CPT0077320001
Normal
0.2
CPT0075570001
Normal
0.2
CPT0077140001
Normal
0.2
CPT0078660003
Tumor
0.2
CPT0069190001
Normal
0.2
CPT0092730003
Tumor
0.2
CPT0009020003
Normal
0.2
CPT0023710001
Normal
0.2
CPT0014130001
Normal
0.2
CPT0086890003
Normal
0.2
CPT0001350001
Normal
0.2
CPT0065690003
Tumor
0.2
CPT0010170001
Normal
0.1
CPT0010120001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0092790003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0089480003
Normal
0.1
CPT0000790001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0025060001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0026420001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0023350003
Tumor
0.1
CPT0007470001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0025920001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0079180003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0092190003
Normal
0.1
CPT0024680001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0066470004
Tumor
0.1
CPT0006950001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0089040001
Normal
0.1
CPT0081620001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0086370003
Normal
0.1
CPT0086970003
Normal
0.1
CPT0078940001
Normal
0.1
CPT0066480003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0001270001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0088920001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0079410003
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0014450004
Tumor
0.0
CPT0086360003
Tumor
-0.1
CPT0025230003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0079380003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0024670003
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0002350011
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0012080003
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0015730003
Tumor
-0.2
CPT0017410003
Tumor
-0.2
CPT0081990003
Tumor
-0.2
CPT0075720003
Tumor
-0.3
CPT0006900003
Tumor
-0.3
CPT0009000003
Tumor
-0.3
CPT0081600003
Tumor
-0.3
CPT0011240003
Tumor
-0.3
CPT0012670003
Tumor
-0.3
CPT0087040003
Tumor
-0.3
CPT0079230003
Tumor
-0.3
CPT0001260009
Tumor
-0.3
CPT0088760003
Tumor
-0.3
CPT0078830003
Tumor
-0.3
CPT0088480003
Tumor
-0.3
CPT0088900003
Tumor
-0.3
CPT0001180009
Tumor
-0.3
CPT0001500009
Tumor
-0.3
CPT0012280003
Tumor
-0.4
CPT0088690003
Tumor
-0.4
CPT0086820003
Tumor
-0.4
CPT0025580004
Tumor
-0.4
CPT0086870003
Tumor
-0.4
CPT0025350003
Tumor
-0.4
CPT0012900004
Tumor
-0.4
CPT0000780007
Tumor
-0.4
CPT0089020003
Tumor
-0.4
CPT0078990003
Tumor
-0.4
CPT0025880003
Tumor
-0.4
CPT0069000003
Tumor
-0.4
CPT0015810003
Tumor
-0.4
CPT0079270003
Tumor
-0.5
CPT0010160003
Tumor
-0.5
CPT0071150004
Tumor
-0.5
CPT0077490003
Tumor
-0.5
CPT0001540009
Tumor
-0.5
CPT0000870016
Tumor
-0.6
CPT0079480003
Tumor
-0.6
CPT0006440003
Tumor
-0.6
CPT0065870003
Tumor
-0.6
CPT0007320003
Tumor
-0.6
CPT0086950003
Tumor
-0.6
CPT0000640003
Tumor
-0.7
CPT0009060003
Tumor
-0.7
CPT0085670003
Tumor
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
