HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:51.3 nTPM
HPA Brain:139.9 nTPM
GTEx:51.3 nTPM
FANTOM5:43.7 Scaled Tags Per Million
Pig:45.9 nTPM
Mouse:153.4 nTPM
Allen mouse:9.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048961
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 139.9
Sample id Sample description nTPM
Hippocampus
nTPM: 56.5
2148 Female, age 91, left hemisphere 75.5
1898 Male, age 80, left hemisphere 67.1
1855 Male, age 76, left hemisphere 65.1
2621 Female, age 67, right hemisphere 62.1
2529 Female, age 94, left hemisphere 36.5
1911 Female, age 85, right hemisphere 32.8
Dentate gyrus
nTPM: 60.3
1927 Female, age 91, both hemispheres 96.0
2530 Female, age 94, left hemisphere 91.2
2010 Male, age 76, both hemispheres 60.0
2246 Female, age 85, both hemispheres 50.8
2531 Female, age 67, both hemispheres 32.8
2528 Male, age 74, both hemispheres 31.0
Entorhinal gyrus
nTPM: 139.9
2613 Female, age 94, left hemisphere 237.6
2764 Male, age 80, right hemisphere 161.3
1938 Female, age 85, left hemisphere 157.7
2686 Male, age 75, right hemisphere 119.0
1787 Male, age 76, left hemisphere 101.1
2117 Female, age 91, right hemisphere 62.6
Hippocampus, CA1
nTPM: 49.2
1873 Female, age 85, both hemispheres 65.8
2749 Male, age 80, left hemisphere 61.4
2045 Male, age 76, both hemispheres 59.4
2082 Female, age 91, right hemisphere 32.1
2527 Male, age 74, both hemispheres 27.2
Hippocampus, CA2
nTPM: 65.3
1892 Male, age 76, both hemispheres 111.7
1963 Male, age 80, left hemisphere 90.1
2437 Female, age 94, left hemisphere 75.1
1940 Female, age 85, left hemisphere 55.4
2113 Female, age 91, right hemisphere 34.7
2249 Male, age 74, both hemispheres 24.6
Hippocampus, CA3
nTPM: 53.5
1867 Male, age 76, both hemispheres 97.8
2861 Female, age 67, both hemispheres 57.3
1891 Female, age 85, both hemispheres 55.6
2620 Female, age 94, left hemisphere 51.8
2137 Male, age 80, left hemisphere 31.0
2436 Male, age 74, both hemispheres 27.6
Parahippocampal cortex
nTPM: 102.5
2622 Female, age 67, right hemisphere 146.7
1850 Male, age 80, both hemispheres 142.0
2532 Female, age 72, left hemisphere 139.2
2692 Male, age 74, both hemispheres 130.2
1990 Female, age 91, right hemisphere 105.4
1933 Female, age 85, both hemispheres 100.8
2693 Female, age 94, both hemispheres 90.0
2245 Female, age 91, both hemispheres 68.7
2018 Male, age 76, both hemispheres 60.0
2250 Female, age 67, right hemisphere 41.8
Perirhinal gyrus
nTPM: 106.7
2848 Male, age 76, right hemisphere 131.9
1847 Female, age 91, left hemisphere 127.1
1794 Male, age 80, right hemisphere 120.0
1841 Female, age 85, right hemisphere 103.0
2521 Female, age 94, right hemisphere 51.6
Subiculum
nTPM: 67.0
1977 Female, age 85, both hemispheres 97.3
2619 Male, age 74, both hemispheres 82.7
2438 Female, age 94, left hemisphere 81.0
1901 Male, age 80, both hemispheres 56.0
2042 Male, age 76, both hemispheres 51.3
2729 Female, age 91, right hemisphere 33.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 51.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 51.3
Samples: 197

Max nTPM: 204.5
Min nTPM: 11.4
Std nTPM: 32.4
Median nTPM: 40.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 204.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 148.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 143.6
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 136.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 131.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 121.0
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 116.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 115.5
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 111.9
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 111.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 110.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 43.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.7
FF:10153-102I9 76 years, female 63.6
FF:10169-103B7 60 years, female 23.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 45.9
Pig sample Sample description nTPM
Subiculum
nTPM: 45.9
Samples: 4

Max nTPM: 72.2
Min nTPM: 30.2
Sample A Female 72.2
Sample B Female 43.2
Sample C Male 37.9
Sample D Male 30.2
Dorsal hippocampus
nTPM: 25.5
Samples: 4

Max nTPM: 35.2
Min nTPM: 19.7
Sample A Female 25.9
Sample B Female 19.7
Sample C Male 35.2
Sample D Male 21.0
Entorhinal cortex
nTPM: 36.8
Samples: 4

Max nTPM: 39.1
Min nTPM: 34.3
Sample A Female 34.3
Sample B Female 39.1
Sample C Male 36.8
Sample D Male 37.0
Ventral hippocampus
nTPM: 28.2
Samples: 4

Max nTPM: 41.2
Min nTPM: 22.5
Sample A Female 24.0
Sample B Female 25.0
Sample C Male 41.2
Sample D Male 22.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 153.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 153.5
Samples: 4

Max nTPM: 186.7
Min nTPM: 127.0
Sample A Male 172.0
Sample B Male 186.7
Sample C Female 127.0
Sample D Female 128.1
Hippocampal formation
nTPM: 89.0
Samples: 4

Max nTPM: 98.2
Min nTPM: 75.7
Sample A Male 94.8
Sample B Male 87.4
Sample C Female 75.7
Sample D Female 98.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 9.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.0
69671911 Antisense, RP_050428_02_F02, Mouse strain C57BL/6J (56 days, male) 9.0

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