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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMARCC2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
89.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
74.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
72.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
69.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
62.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
60.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
46.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
46.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
46.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
45.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
45.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
44.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
43.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
43.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
41.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
41.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
41.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
38.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
38.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
36.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
35.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
34.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
34.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
34.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
33.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
32.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
32.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
30.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
29.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
29.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
29.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
28.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
26.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
26.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
25.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
23.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
23.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
23.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
22.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
22.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
22.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
21.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
21.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
21.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
21.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
20.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
20.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
19.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
19.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
18.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
18.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
18.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
17.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
16.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
16.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
16.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
15.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
15.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
14.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
14.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
14.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
14.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
13.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMARCC2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
57.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
57.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
55.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
52.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
51.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
51.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
50.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
49.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
49.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
49.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
49.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
48.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
47.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
47.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
47.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
46.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
46.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
46.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
46.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
46.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
45.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
45.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
45.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
45.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
45.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
45.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
45.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
45.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
44.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
44.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
44.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
44.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
44.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
44.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
43.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
43.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
43.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
43.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
43.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
43.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
42.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
42.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
42.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
42.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
42.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
42.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
42.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
41.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
41.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
41.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
41.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
41.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
41.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
41.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
41.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
41.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
41.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
41.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
41.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
41.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
41.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
41.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
40.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
40.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
40.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
40.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
40.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
40.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
39.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
39.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
39.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
39.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
39.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
39.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
39.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
39.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
39.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
39.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
39.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
39.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
39.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
39.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
39.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
39.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
39.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
39.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
39.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
38.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
38.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
38.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
38.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
38.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
38.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
38.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
38.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
38.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
38.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
38.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
38.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
38.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
38.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
38.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
38.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
37.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
37.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
37.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
37.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
37.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
37.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
37.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
37.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
37.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
37.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
37.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
37.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
37.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
37.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
37.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
37.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
36.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
36.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
36.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
36.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
36.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
36.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
36.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
36.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
36.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
36.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
36.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
36.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
36.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
36.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
36.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
36.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
36.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
36.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
36.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
36.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
35.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
35.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
35.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
35.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
35.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
35.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
35.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
35.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
35.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
35.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
35.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
35.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
34.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
34.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
34.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
34.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
34.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
34.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
34.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
34.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
34.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
34.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
34.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
34.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
34.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
34.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
33.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
33.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
33.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
33.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
33.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
33.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
33.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
33.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
33.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
33.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
33.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
33.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
33.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
33.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
33.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
33.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
33.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
33.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
32.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
32.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
32.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
32.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
32.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
32.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
32.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
32.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
32.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
32.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
32.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
32.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
32.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
31.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
31.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
31.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
31.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
31.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
31.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
31.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
31.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
31.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
31.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
31.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
31.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
31.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
31.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
31.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
31.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
31.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
31.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
31.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
31.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
30.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
30.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
30.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
30.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
30.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
30.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
30.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
30.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
30.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
30.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
30.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
30.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
30.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
30.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
30.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
30.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
30.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
30.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
30.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
30.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
29.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
29.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
29.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
29.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
29.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
29.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
29.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
29.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
29.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
29.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
29.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
29.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
29.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
29.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
29.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
29.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
29.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
29.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
29.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
29.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
29.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
29.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
28.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
28.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
28.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
28.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
28.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
28.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
28.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
28.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
28.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
28.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
28.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
28.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
28.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
28.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
28.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
28.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
28.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
28.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
28.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
28.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
28.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
28.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
28.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
28.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
27.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
27.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
27.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
27.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
27.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
27.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
27.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
27.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
27.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
27.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
27.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
27.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
27.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
27.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
27.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
27.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
26.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
26.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
26.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
26.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
26.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
26.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
26.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
26.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
26.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
26.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
26.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
26.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
26.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
26.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
26.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
26.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
26.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
26.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
26.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
26.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
26.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
26.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
26.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
26.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
25.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
25.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
25.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
25.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
25.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
25.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
25.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
25.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
25.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
25.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
25.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
25.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
25.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
25.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
25.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
25.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
25.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
25.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
25.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
25.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
24.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
24.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
24.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
24.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
24.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
24.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
24.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
24.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
24.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
24.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
24.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
24.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
24.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
24.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
24.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
24.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
24.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
24.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
23.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
23.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
23.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
23.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
23.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
23.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
23.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
23.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
23.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
23.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
23.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
23.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
23.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
23.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
23.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
23.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
23.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
23.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
23.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
23.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
23.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
22.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
22.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
22.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
22.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
22.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
22.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
22.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
22.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
22.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
22.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
22.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
22.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
22.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
22.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
22.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
22.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
21.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
21.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
21.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
21.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
21.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
21.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
21.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
21.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
21.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
21.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
21.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
21.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
21.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
21.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
21.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
21.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
21.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
21.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
21.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
21.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
20.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
20.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
20.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
20.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
20.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
20.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
20.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
20.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
20.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
20.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
20.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
20.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
20.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
20.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
19.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
19.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
19.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
19.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
19.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
19.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
19.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
19.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
19.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
19.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
19.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
19.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
19.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
19.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
19.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
19.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
19.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
19.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
19.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
19.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
19.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
18.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
18.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
18.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
18.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
18.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
18.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
18.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
18.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
18.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
18.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
18.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
18.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
18.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
18.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
18.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
17.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
17.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
17.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
17.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
17.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
17.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
17.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
17.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
17.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
17.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
16.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
16.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
16.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
16.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
16.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
16.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
16.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
16.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
16.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
15.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
15.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
15.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
15.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
15.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
15.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
14.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
14.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
14.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
14.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
14.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
14.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
13.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
13.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
13.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
13.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
12.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
12.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
12.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
12.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
12.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
12.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
11.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
11.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
11.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
10.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
10.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
10.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
10.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
8.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
7.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
5.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMARCC2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
35.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
68.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
57.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
52.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
50.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
49.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
48.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
48.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
47.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
46.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
46.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
46.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
45.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
45.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
45.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
45.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
44.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
44.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
44.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
43.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
43.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
43.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
42.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
41.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
40.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
40.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
40.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
40.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
39.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
39.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
39.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
39.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
39.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
39.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
39.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
39.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
39.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
38.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
38.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
38.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
36.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
36.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
36.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
36.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
36.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
36.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
36.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
36.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
36.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
35.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
35.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
35.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
34.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
34.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
34.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
34.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
34.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
34.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
34.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
34.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
34.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
33.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
33.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
33.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
33.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
32.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
32.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
32.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
32.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
32.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
32.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
31.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
31.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
31.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
30.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
30.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
30.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
30.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
30.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
29.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
29.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
29.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
29.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
28.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
28.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
27.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
26.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
26.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
26.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
25.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
25.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
24.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
23.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
22.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
22.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
20.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
20.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
19.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
18.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
18.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMARCC2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
198.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
108.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
106.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
97.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
93.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
91.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
85.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
80.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
78.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
77.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
76.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
75.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
75.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
74.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
74.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
73.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
71.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
71.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
71.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
71.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
70.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
70.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
68.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
66.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
66.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
66.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
65.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
64.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
63.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
62.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
62.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
61.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
60.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
60.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
60.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
59.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
59.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
59.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
58.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
58.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
58.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
57.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
57.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
57.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
57.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
56.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
56.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
54.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
54.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
54.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
54.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
52.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
52.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
51.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
51.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
51.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
50.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
49.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
49.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
48.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
47.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
47.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
47.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
46.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
46.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
46.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
46.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
46.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
46.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
46.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
46.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
46.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
45.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
45.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
45.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
45.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
45.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
45.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
45.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
45.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
44.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
44.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
44.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
43.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
43.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
43.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
43.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
42.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
42.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
42.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
42.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
42.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
42.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
42.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
42.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
42.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
42.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
41.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
40.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
40.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
40.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
40.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
40.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
39.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
39.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
39.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
39.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
39.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
39.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
39.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
39.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
39.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
39.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
38.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
38.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
38.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
38.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
37.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
37.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
37.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
37.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
37.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
37.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
36.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
36.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
36.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
36.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
35.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
35.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
35.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
35.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
35.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
35.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
35.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
35.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
35.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
35.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
35.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
34.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
34.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
34.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
34.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
34.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
34.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
34.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
34.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
33.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
33.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
33.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
33.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
33.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
33.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
33.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
32.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
32.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
32.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
32.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
32.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
32.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
32.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
31.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
31.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
31.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
31.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
31.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
31.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
31.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
31.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
31.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
31.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
30.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
30.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
30.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
30.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
29.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
29.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
29.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
29.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
29.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
29.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
29.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
29.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
29.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
29.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
29.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
29.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
28.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
28.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
28.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
28.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
27.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
27.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
27.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
27.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
27.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
27.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
26.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
26.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
26.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
26.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
26.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
26.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
26.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
26.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
26.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
26.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
26.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
25.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
25.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
25.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
25.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
25.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
24.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
24.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
24.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
24.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
24.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
23.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
23.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
23.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
23.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
23.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
23.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
23.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
23.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
23.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
22.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
22.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
22.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
22.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
22.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
22.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
22.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
22.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
22.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
21.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
21.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
21.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
21.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
21.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
20.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
20.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
20.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
20.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
20.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
20.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
20.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
19.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
19.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
19.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
19.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
18.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
18.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
18.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
17.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
17.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
16.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
16.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
16.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
16.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
16.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
16.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
15.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
15.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
15.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
14.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
14.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
13.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
13.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
13.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
13.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
13.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
12.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
12.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
12.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
11.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
11.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
11.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
11.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
8.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.9
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012640003
Normal
0.5
CPT0088970003
Tumor
0.5
CPT0012080003
Tumor
0.5
CPT0012180003
Tumor
0.4
CPT0088550004
Tumor
0.4
CPT0017410003
Tumor
0.4
CPT0001340003
Tumor
0.4
CPT0079300001
Normal
0.4
CPT0077320001
Normal
0.4
CPT0010160003
Tumor
0.4
CPT0071150004
Tumor
0.4
CPT0079510001
Normal
0.4
CPT0092190003
Normal
0.3
CPT0085670003
Tumor
0.3
CPT0009060003
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0006440003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0010120001
Normal
0.3
CPT0077490003
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0084590001
Normal
0.2
CPT0001230001
Normal
0.2
CPT0088760003
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0063630003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0025290003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0079180003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0009020003
Normal
0.2
CPT0088690003
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0012920003
Normal
0.2
CPT0025880003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0025050003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0081990003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0069190001
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0092290003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0065430003
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0025920001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0079000001
Normal
0.1
CPT0086820003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0087040003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0078510003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0025230003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0063320003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0078940001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0012280003
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0088570001
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0012550003
Tumor
0.0
CPT0084560003
Tumor
0.0
CPT0081880003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0011410003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0001180009
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0014130001
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0078660003
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0023360001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0077310003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0086360003
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0015730003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0023350003
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0007320003
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0000790001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0001350001
Normal
-0.2
CPT0092800003
Normal
-0.2
CPT0086950003
Tumor
-0.2
CPT0065450001
Normal
-0.2
CPT0001500009
Tumor
-0.2
CPT0066430001
Normal
-0.2
CPT0065750003
Tumor
-0.2
CPT0026420001
Normal
-0.2
CPT0076350001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0002270011
Tumor
-0.3
CPT0076330003
Tumor
-0.3
CPT0078800003
Tumor
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
