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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMARCC2 is not prognostic in Colon Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.5
Number of samples
254
Samples
Sample
Description
TPM
TCGA-CM-6172-01A
0 years, female, white, stage:Stage IIIB, alive, 335 days
67.2
TCGA-SS-A7HO-01A
0 years, female, black or african american, stage:Stage IIB, alive, 1829 days
51.7
TCGA-CM-6171-01A
0 years, female, white, stage:Stage I, alive, 427 days
51.0
TCGA-D5-6922-01A
0 years, male, white, stage:Stage IIIA, alive, 308 days
48.7
TCGA-DM-A1DB-01A
0 years, male, white, stage:Stage IIA, dead, 1348 days
48.1
TCGA-QG-A5Z1-01A
0 years, male, black or african american, stage:Stage IIIB, dead, 256 days
47.3
TCGA-D5-6926-01A
0 years, male, white, stage:Stage IIIB, alive, 275 days
46.5
TCGA-CM-6675-01A
0 years, male, black or african american, stage:Stage IVB, alive, 397 days
46.4
TCGA-A6-5662-01A
0 years, male, white, stage:Stage IVA, alive, 718 days
46.1
TCGA-G4-6299-01A
0 years, male, white, stage:Stage IIIC, alive, 2268 days
45.7
TCGA-AZ-6598-01A
0 years, female, white, stage:Stage II, dead, 1503 days
44.6
TCGA-AZ-6607-01A
0 years, male, white, stage:Stage IV, dead, 97 days
43.8
TCGA-NH-A6GA-01A
0 years, male, black or african american, stage:Stage IIIC, dead, 302 days
42.0
TCGA-3L-AA1B-01A
0 years, female, black or african american, stage:Stage I, alive, 475 days
41.8
TCGA-A6-6652-01A
0 years, male, black or african american, stage:Stage IVA, alive, 751 days
41.0
TCGA-G4-6303-01A
0 years, female, white, stage:Stage IV, dead, 2003 days
40.3
TCGA-A6-6140-01A
0 years, male, white, stage:Stage IIA, alive, 734 days
40.0
TCGA-AY-A69D-01A
0 years, female, black or african american, stage:Stage IIA, alive, 543 days
39.4
TCGA-D5-6931-01A
0 years, male, white, stage:Stage IIIC, alive, 365 days
38.9
TCGA-AA-3713-01A
0 years, male, stage:Stage IV, alive, 579 days
38.8
TCGA-CM-6170-01A
0 years, female, white, stage:Stage I, alive, 457 days
38.7
TCGA-A6-6138-01A
0 years, male, white, stage:Stage I, alive, 685 days
38.2
TCGA-CK-4952-01A
0 years, female, white, stage:Stage IIIC, alive, 475 days
38.0
TCGA-D5-6928-01A
0 years, male, white, stage:Stage IIA, alive, 354 days
37.8
TCGA-CK-5916-01A
0 years, female, white, stage:Stage I, dead, 643 days
37.3
TCGA-NH-A50U-01A
0 years, male, black or african american, stage:Stage IVA, dead, 334 days
37.1
TCGA-AZ-6603-01A
0 years, female, white, stage:'--, dead, 899 days
37.0
TCGA-A6-5664-01A
0 years, male, black or african american, stage:Stage IIIC, alive, 672 days
36.8
TCGA-AA-3496-01A
0 years, female, stage:Stage II, alive, 31 days
36.7
TCGA-CM-6679-01A
0 years, male, white, stage:Stage IIA, alive, 306 days
36.6
TCGA-CK-5912-01A
0 years, male, white, stage:Stage I, dead, 1493 days
36.4
TCGA-D5-7000-01A
0 years, female, white, stage:Stage I, alive, 312 days
36.4
TCGA-A6-6650-01A
0 years, female, black or african american, stage:Stage IIA, alive, 627 days
36.3
TCGA-CM-6169-01A
0 years, male, black or african american, stage:Stage IIA, alive, 396 days
35.9
TCGA-A6-5667-01A
0 years, female, white, stage:Stage IIIB, alive, 887 days
35.6
TCGA-CA-5254-01A
0 years, female, asian, stage:Stage IIA, alive, 386 days
35.6
TCGA-QG-A5Z2-01A
0 years, male, black or african american, stage:Stage I, alive, 952 days
35.6
TCGA-F4-6459-01A
0 years, female, white, stage:Stage IIIB, dead, 262 days
35.2
TCGA-F4-6463-01A
0 years, male, white, stage:Stage IIA, alive, 1087 days
35.1
TCGA-G4-6295-01A
0 years, female, white, stage:Stage II, alive, 254 days
35.1
TCGA-AD-5900-01A
0 years, male, white, stage:Stage I, alive, 370 days
34.4
TCGA-G4-6628-01A
0 years, male, white, stage:Stage I, alive, 2424 days
34.3
TCGA-CA-6718-01A
0 years, male, asian, stage:Stage IIA, dead, 306 days
34.1
TCGA-NH-A8F7-01A
0 years, female, black or african american, stage:Stage IIA, alive, 543 days
34.1
TCGA-CA-6715-01A
0 years, male, asian, stage:Stage IIIB, alive, 383 days
33.8
TCGA-G4-6323-01A
0 years, male, black or african american, stage:Stage IA, alive, 419 days
33.7
TCGA-D5-6529-01A
0 years, male, white, stage:Stage IIA, alive, 614 days
33.6
TCGA-CK-6747-01A
0 years, female, white, stage:Stage IIA, alive, 820 days
33.6
TCGA-F4-6806-01A
0 years, female, white, stage:Stage I, alive, 1260 days
33.6
TCGA-G4-6297-01A
0 years, female, white, stage:Stage IV, alive, 2506 days
33.5
TCGA-A6-6137-01A
0 years, male, white, stage:Stage IIIB, alive, 824 days
33.5
TCGA-CM-6165-01A
0 years, male, white, stage:Stage IIA, alive, 488 days
33.3
TCGA-D5-6531-01A
0 years, male, white, stage:Stage IIA, alive, 540 days
33.2
TCGA-A6-6654-01A
0 years, female, white, stage:Stage IIIB, alive, 726 days
33.2
TCGA-A6-6649-01A
0 years, male, white, stage:Stage IIIB, alive, 735 days
32.9
TCGA-A6-A56B-01A
0 years, male, black or african american, stage:Stage IIIB, dead, 1711 days
32.9
TCGA-F4-6856-01A
0 years, male, white, stage:Stage I, alive, 1074 days
32.9
TCGA-CM-6168-01A
0 years, female, black or african american, stage:Stage IIA, alive, 395 days
32.8
TCGA-D5-6537-01A
0 years, male, white, stage:Stage IIIB, dead, 146 days
32.8
TCGA-A6-2675-01A
0 years, male, white, stage:Stage IIA, alive, 1321 days
32.8
TCGA-QG-A5YV-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1301 days
32.7
TCGA-DM-A28A-01A
0 years, male, white, stage:Stage IIIC, dead, 805 days
32.6
TCGA-CK-6748-01A
0 years, female, white, stage:Stage IV, alive, 61 days
32.5
TCGA-DM-A1HA-01A
0 years, male, white, stage:Stage IIIC, alive, 2600 days
32.5
TCGA-D5-6923-01A
0 years, male, white, stage:Stage I, alive, 378 days
32.4
TCGA-T9-A92H-01A
0 years, male, black or african american, stage:Stage IIA, alive, 362 days
32.3
TCGA-AZ-6601-01A
0 years, male, white, stage:Stage II, dead, 3042 days
32.2
TCGA-AY-6197-01A
0 years, male, white, stage:Stage IIA, alive, 652 days
32.2
TCGA-AZ-6599-01A
0 years, male, white, stage:Stage I, dead, 206 days
32.2
TCGA-AA-3655-01A
0 years, male, stage:Stage II, alive, 1856 days
32.2
TCGA-D5-6898-01A
0 years, female, white, stage:Stage I, alive, 229 days
32.2
TCGA-F4-6854-01A
0 years, female, white, stage:Stage IIA, alive, 16 days
32.1
TCGA-A6-6651-01A
0 years, female, white, stage:Stage IIIB, alive, 662 days
32.1
TCGA-D5-6924-01A
0 years, male, white, stage:Stage IIA, alive, 435 days
32.0
TCGA-CM-6162-01A
0 years, female, white, stage:Stage IIIB, alive, 365 days
31.8
TCGA-A6-6142-01A
0 years, female, white, stage:Stage IVA, alive, 763 days
31.6
TCGA-AD-6964-01A
0 years, male, white, stage:'--, dead, 331 days
31.4
TCGA-AZ-4323-01A
0 years, male, white, stage:Stage IV, dead, 43 days
31.1
TCGA-D5-6540-01A
0 years, male, white, stage:Stage I, alive, 491 days
30.9
TCGA-AD-6901-01A
0 years, male, white, stage:'--, dead, 682 days
30.8
TCGA-D5-6539-01A
0 years, female, white, stage:'--, alive, 380 days
30.8
TCGA-CM-6161-01A
0 years, female, white, stage:Stage I, alive, 457 days
30.7
TCGA-D5-6530-01A
0 years, male, white, stage:Stage I, alive, 621 days
30.7
TCGA-CA-5797-01A
0 years, male, asian, stage:Stage IIA, alive, 383 days
30.6
TCGA-G4-6314-01A
0 years, female, white, stage:Stage IV, alive, 1093 days
30.5
TCGA-G4-6626-01A
0 years, male, white, stage:Stage IIA, dead, 1 days
30.4
TCGA-D5-6533-01A
0 years, female, white, stage:'--, alive, 775 days
30.3
TCGA-CM-6167-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 456 days
30.3
TCGA-A6-5657-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 962 days
30.3
TCGA-CM-6677-01A
0 years, female, white, stage:Stage IIA, alive, 337 days
30.2
TCGA-CM-6676-01A
0 years, male, white, stage:Stage I, alive, 337 days
30.2
TCGA-DM-A0X9-01A
0 years, female, white, stage:Stage IIA, alive, 3641 days
30.1
TCGA-D5-6534-01A
0 years, female, white, stage:Stage IIA, alive, 1316 days
30.1
TCGA-G4-6309-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 2600 days
30.0
TCGA-F4-6570-01A
0 years, female, white, stage:Stage IIA, dead, 188 days
29.7
TCGA-A6-6653-01A
0 years, male, white, stage:Stage I, alive, 742 days
29.7
TCGA-F4-6569-01A
0 years, male, white, stage:Stage I, alive, 1087 days
29.7
TCGA-F4-6855-01A
0 years, female, white, stage:Stage IIA, alive, 1442 days
29.6
TCGA-D5-6927-01A
0 years, male, white, stage:Stage IIA, alive, 287 days
29.6
TCGA-A6-4105-01A
0 years, male, white, stage:Stage IIA, dead, 442 days
29.6
TCGA-D5-6535-01A
0 years, female, white, stage:Stage IIIB, alive, 460 days
29.6
TCGA-F4-6460-01A
0 years, female, white, stage:Stage IIIB, dead, 972 days
29.5
TCGA-CM-6166-01A
0 years, female, white, stage:Stage I, alive, 669 days
29.4
TCGA-CA-6719-01A
0 years, male, asian, stage:Stage IIA, alive, 435 days
29.3
TCGA-CM-6164-01A
0 years, female, white, stage:Stage IIA, alive, 883 days
29.1
TCGA-CM-5348-01A
0 years, male, white, stage:Stage IIIB, alive, 699 days
29.0
TCGA-DM-A285-01A
0 years, female, white, stage:Stage IV, dead, 179 days
28.9
TCGA-CA-6716-01A
0 years, male, asian, stage:Stage IIA, alive, 371 days
28.8
TCGA-A6-6141-01A
0 years, male, black or african american, stage:Stage IIA, alive, 255 days
28.4
TCGA-G4-6306-01A
0 years, male, white, stage:'--, alive, 1359 days
28.3
TCGA-CM-4751-01A
0 years, male, white, stage:Stage IIIB, alive, 822 days
28.2
TCGA-AD-6899-01A
0 years, male, white, stage:Stage IIIC, dead, 176 days
28.2
TCGA-A6-6648-01A
0 years, male, white, stage:Stage IVA, alive, 766 days
28.2
TCGA-CA-6717-01A
0 years, male, asian, stage:Stage IIA, alive, 388 days
28.0
TCGA-DM-A28C-01A
0 years, male, white, stage:Stage IIA, dead, 2475 days
27.9
TCGA-CM-5863-01A
0 years, female, white, stage:Stage IIIB, alive, 457 days
27.9
TCGA-AA-3660-01A
0 years, female, stage:Stage II, alive, 2375 days
27.8
TCGA-AZ-6608-01A
0 years, female, white, stage:Stage IIIA, dead, 59 days
27.7
TCGA-CM-6680-01A
0 years, female, white, stage:Stage IIIB, alive, 366 days
27.7
TCGA-G4-6625-01A
0 years, female, white, stage:Stage IIA, alive, 2792 days
27.6
TCGA-G4-6293-01A
0 years, female, white, stage:Stage III, alive, 4051 days
27.6
TCGA-AZ-6606-01A
0 years, male, white, stage:Stage IV, dead, 357 days
27.6
TCGA-AD-6965-01A
0 years, male, white, stage:Stage IIIC, alive, 805 days
27.5
TCGA-G4-6588-01A
0 years, female, white, stage:Stage IIA, alive, 796 days
27.4
TCGA-F4-6807-01A
0 years, female, white, stage:Stage IIIC, alive, 1309 days
27.3
TCGA-F4-6805-01A
0 years, female, white, stage:Stage IIA, alive, 1047 days
27.2
TCGA-DM-A1D6-01A
0 years, male, white, stage:Stage IIA, dead, 570 days
27.2
TCGA-AU-6004-01A
0 years, female, white, stage:Stage I, alive, 824 days
27.1
TCGA-CM-5344-01A
0 years, female, white, stage:Stage IIIB, alive, 670 days
27.0
TCGA-D5-5537-01A
0 years, male, white, stage:'--, dead, 1381 days
27.0
TCGA-AY-A71X-01A
0 years, female, black or african american, stage:Stage I, alive, 588 days
27.0
TCGA-4N-A93T-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 146 days
26.9
TCGA-D5-6920-01A
0 years, female, white, stage:Stage IIA, alive, 377 days
26.9
TCGA-DM-A28E-01A
0 years, female, white, stage:Stage IIA, alive, 3648 days
26.8
TCGA-AA-3489-01A
0 years, male, stage:Stage II, dead, 214 days
26.8
TCGA-A6-A567-01A
0 years, male, black or african american, stage:Stage IV, dead, 1881 days
26.8
TCGA-A6-A566-01A
0 years, female, black or african american, stage:Stage IIIB, dead, 758 days
26.7
TCGA-WS-AB45-01A
0 years, female, black or african american, stage:Stage IIA, alive, 2130 days
26.7
TCGA-NH-A6GB-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 476 days
26.7
TCGA-G4-6311-01A
0 years, male, white, stage:Stage III, alive, 1199 days
26.6
TCGA-CM-6678-01A
0 years, female, white, stage:Stage IVA, alive, 335 days
26.6
TCGA-AY-6386-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 542 days
26.6
TCGA-A6-5661-01A
0 years, female, black or african american, stage:Stage IIA, alive, 1020 days
26.5
TCGA-G4-6307-01A
0 years, female, white, stage:Stage IIIB, alive, 1674 days
26.1
TCGA-AY-A8YK-01A
0 years, male, black or african american, stage:Stage IVA, alive, 573 days
26.0
TCGA-NH-A8F8-01A
0 years, male, black or african american, stage:Stage IV, dead, 511 days
26.0
TCGA-G4-6315-01A
0 years, male, white, stage:Stage IV, alive, 1883 days
26.0
TCGA-CK-5914-01A
0 years, male, white, stage:Stage IIIB, alive, 669 days
25.8
TCGA-AA-3511-01A
0 years, male, stage:Stage II, alive, 212 days
25.8
TCGA-AD-A5EK-01A
0 years, male, black or african american, stage:Stage I, alive, 500 days
25.7
TCGA-AD-6890-01A
0 years, male, white, stage:'--, alive, 746 days
25.7
TCGA-5M-AATE-01A
0 years, male, black or african american, stage:Stage IIA, alive, 1200 days
25.4
TCGA-G4-6627-01A
0 years, male, white, stage:Stage IIA, alive, 2175 days
25.3
TCGA-AD-6548-01A
0 years, female, white, stage:Stage I, alive, 650 days
25.2
TCGA-QG-A5YX-01A
0 years, female, black or african american, stage:Stage IIA, alive, 1003 days
25.1
TCGA-DM-A28F-01A
0 years, male, white, stage:Stage IIIB, dead, 1094 days
25.0
TCGA-NH-A6GC-01A
0 years, female, black or african american, stage:Stage IVB, alive, 389 days
24.9
TCGA-DM-A0XF-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
24.8
TCGA-4T-AA8H-01A
0 years, female, black or african american, stage:Stage IIA, alive, 385 days
24.7
TCGA-A6-5656-01A
0 years, male, white, stage:Stage I, alive, 1001 days
24.5
TCGA-QL-A97D-01A
0 years, female, black or african american, stage:Stage I, alive, 666 days
24.4
TCGA-F4-6461-01A
0 years, female, white, stage:Stage IIIC, dead, 338 days
24.3
TCGA-CM-5868-01A
0 years, female, white, stage:Stage IVA, alive, 518 days
24.2
TCGA-AZ-6600-01A
0 years, male, black or african american, stage:Stage IV, dead, 368 days
24.1
TCGA-G4-6586-01A
0 years, female, white, stage:Stage IIA, alive, 1089 days
23.9
TCGA-AA-3697-01A
0 years, male, stage:Stage II, alive, 2587 days
23.9
TCGA-AZ-6605-01A
0 years, male, white, stage:Stage IIIB, dead, 159 days
23.8
TCGA-G4-6322-01A
0 years, male, white, stage:Stage IIIB, alive, 792 days
23.7
TCGA-D5-6532-01A
0 years, male, white, stage:Stage IIA, alive, 555 days
23.7
TCGA-F4-6704-01A
0 years, male, american indian or alaska native, stage:Stage IIIC, alive, 47 days
23.6
TCGA-NH-A50V-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 588 days
23.6
TCGA-D5-6538-01A
0 years, female, white, stage:Stage IIIB, alive, 521 days
23.4
TCGA-AM-5820-01A
0 years, female, white, stage:Stage IVA, alive, 14 days
23.4
TCGA-CK-5913-01A
0 years, female, white, stage:Stage IIA, alive, 1561 days
23.4
TCGA-G4-6304-01A
0 years, female, white, stage:Stage IIB, alive, 1631 days
23.4
TCGA-AA-A02K-01A
0 years, male, stage:Stage IV, dead, 426 days
23.2
TCGA-F4-6809-01A
0 years, female, white, stage:Stage IVA, dead, 403 days
23.2
TCGA-G4-6320-01A
0 years, male, white, stage:Stage III, alive, 804 days
23.2
TCGA-AD-6963-01A
0 years, male, white, stage:'--, alive, 834 days
23.1
TCGA-DM-A28G-01A
0 years, male, white, stage:Stage IIA, dead, 1849 days
23.0
TCGA-CM-5860-01A
0 years, male, white, stage:Stage IIA, alive, 974 days
22.9
TCGA-DM-A1D4-01A
0 years, male, white, stage:Stage IIA, dead, 2821 days
22.8
TCGA-CM-5349-01A
0 years, female, white, stage:Stage IIA, alive, 915 days
22.8
TCGA-F4-6703-01A
0 years, male, white, stage:Stage IIA, alive, 1456 days
22.7
TCGA-G4-6310-01A
0 years, male, white, stage:Stage IIIB, alive, 1935 days
22.7
TCGA-A6-A565-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 494 days
22.4
TCGA-CM-6163-01A
0 years, male, white, stage:Stage I, alive, 427 days
22.3
TCGA-DM-A28K-01A
0 years, male, white, stage:Stage IIA, alive, 2988 days
22.2
TCGA-AA-A02Y-01A
0 years, male, stage:Stage I, alive, 1216 days
22.0
TCGA-DM-A28M-01A
0 years, male, white, stage:Stage IIA, alive, 2895 days
22.0
TCGA-D5-5538-01A
0 years, female, white, stage:Stage IIIB, dead, 1661 days
21.9
TCGA-F4-6808-01A
0 years, female, white, stage:Stage I, alive, 1024 days
21.9
TCGA-D5-6536-01A
0 years, male, white, stage:Stage IIA, alive, 543 days
21.6
TCGA-CM-5861-01A
0 years, female, white, stage:Stage IIA, alive, 457 days
21.4
TCGA-A6-A5ZU-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 293 days
21.3
TCGA-DM-A1D9-01A
0 years, female, white, stage:Stage IIA, alive, 4270 days
21.2
TCGA-A6-5660-01A
0 years, male, black or african american, stage:Stage IIIC, alive, 888 days
21.2
TCGA-G4-6294-01A
0 years, male, white, stage:Stage IV, dead, 858 days
20.8
TCGA-AA-3662-01A
0 years, female, stage:Stage IV, alive, 184 days
20.8
TCGA-D5-6541-01A
0 years, male, white, stage:Stage IIA, alive, 474 days
20.7
TCGA-CK-4950-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 2599 days
20.6
TCGA-A6-5665-01A
0 years, female, white, stage:Stage IIA, alive, 671 days
20.6
TCGA-D5-6930-01A
0 years, male, white, stage:Stage IIA, alive, 406 days
20.6
TCGA-CM-6674-01A
0 years, male, white, stage:Stage IIA, alive, 394 days
20.6
TCGA-5M-AAT4-01A
0 years, male, black or african american, stage:Stage IV, dead, 49 days
20.5
TCGA-CK-6751-01A
0 years, female, white, stage:Stage I, alive, 518 days
20.4
TCGA-AU-3779-01A
0 years, female, white, stage:Stage IIA, alive, 441 days
20.4
TCGA-A6-6781-01A
0 years, male, white, stage:Stage IIIC, alive, 598 days
20.1
TCGA-NH-A50T-01A
0 years, female, black or african american, stage:Stage IIA, alive, 553 days
19.8
TCGA-DM-A1D7-01A
0 years, male, white, stage:Stage IIA, dead, 405 days
19.7
TCGA-A6-6782-01A
0 years, male, white, stage:Stage IIB, alive, 617 days
19.5
TCGA-DM-A288-01A
0 years, male, white, stage:Stage IIIC, dead, 427 days
19.5
TCGA-G4-6321-01A
0 years, female, white, stage:Stage III, alive, 672 days
19.5
TCGA-A6-5659-01A
0 years, male, white, stage:Stage I, alive, 926 days
19.5
TCGA-DM-A1D0-01A
0 years, female, white, stage:Stage IIA, alive, 3974 days
19.3
TCGA-RU-A8FL-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 1177 days
19.3
TCGA-DM-A0XD-01A
0 years, male, white, stage:Stage IIA, dead, 743 days
19.2
TCGA-QG-A5YW-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 896 days
19.1
TCGA-AD-6888-01A
0 years, male, white, stage:Stage IIIB, dead, 472 days
19.0
TCGA-A6-6780-01A
0 years, male, white, stage:Stage IIA, alive, 612 days
18.9
TCGA-AY-6196-01A
0 years, male, white, stage:Stage IIIC, alive, 6 days
18.9
TCGA-DM-A282-01A
0 years, female, white, stage:Stage IIA, alive, 4233 days
18.7
TCGA-AY-5543-01A
0 years, female, black or african american, stage:Stage IVA, alive, 1004 days
18.5
TCGA-D5-6932-01A
0 years, male, white, stage:Stage IIA, alive, 346 days
18.4
TCGA-G4-6317-01A
0 years, female, white, stage:Stage IIIC, alive, 1095 days
18.2
TCGA-5M-AAT6-01A
0 years, female, black or african american, stage:Stage IV, dead, 290 days
18.1
TCGA-AM-5821-01A
0 years, female, white, stage:Stage IIA, alive, 28 days
18.0
TCGA-A6-5666-01A
0 years, male, white, stage:Stage IIC, alive, 995 days
17.7
TCGA-DM-A1DA-01A
0 years, female, white, stage:Stage IIIC, dead, 228 days
17.7
TCGA-AZ-5407-01A
0 years, female, white, stage:Stage I, alive, 2683 days
17.7
TCGA-DM-A28H-01A
0 years, male, white, stage:Stage IIIC, alive, 3561 days
17.7
TCGA-AA-3675-01A
0 years, male, stage:Stage II, alive, 1431 days
17.4
TCGA-AZ-4616-01A
0 years, female, white, stage:Stage IV, dead, 156 days
17.3
TCGA-A6-3809-01A
0 years, female, white, stage:Stage IIB, alive, 996 days
17.3
TCGA-A6-3810-01A
0 years, male, white, stage:Stage IIA, alive, 1111 days
17.1
TCGA-AY-A54L-01A
0 years, female, black or african american, stage:Stage I, alive, 525 days
17.0
TCGA-CA-5255-01A
0 years, male, asian, stage:Stage IIA, alive, 376 days
16.8
TCGA-DM-A1HB-01A
0 years, male, white, stage:Stage IIIB, alive, 4126 days
16.5
TCGA-D5-6929-01A
0 years, female, white, stage:Stage IV, alive, 408 days
16.4
TCGA-AZ-5403-01A
0 years, male, white, stage:Stage II, dead, 1910 days
16.2
TCGA-AA-3526-01A
0 years, male, stage:Stage I, alive, 580 days
16.0
TCGA-D5-5539-01A
0 years, male, white, stage:Stage IIIA, alive, 596 days
15.5
TCGA-A6-2686-01A
0 years, female, white, stage:Stage IIA, dead, 1126 days
15.2
TCGA-DM-A280-01A
0 years, female, white, stage:Stage IIA, dead, 236 days
15.1
TCGA-DM-A1D8-01A
0 years, female, white, stage:'--, dead, 383 days
14.9
TCGA-CM-5864-01A
0 years, male, white, stage:Stage I, alive, 457 days
13.9
TCGA-A6-2674-01A
0 years, male, white, stage:Stage IV, alive, 1331 days
13.1
TCGA-CM-5862-01A
0 years, male, white, stage:Stage IVA, dead, 153 days
11.8
TCGA-AA-3663-01A
0 years, male, stage:Stage II, alive, 212 days
11.8
TCGA-AD-6895-01A
0 years, male, white, stage:Stage IIIB, alive, 763 days
11.2
TCGA-CM-4743-01A
0 years, male, white, stage:Stage IIA, alive, 701 days
11.1
TCGA-CM-4744-01A
0 years, male, white, stage:Stage I, alive, 609 days
10.9
TCGA-AA-3685-01A
0 years, male, stage:Stage II, alive, 1127 days
8.0
TCGA-AD-6889-01A
0 years, male, asian, stage:Stage IIA, dead, 2532 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMARCC2 is not prognostic in Colon Adenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
54.4
Number of samples
486
Samples
Sample
Description
TPM
U1276
0 years, male, NA, stage:T3N0M0, alive, 2474 days
98.8
U0168
0 years, male, NA, stage:T3N0M0, dead, 948 days
95.9
U0413
0 years, male, NA, stage:T2N0M0, alive, 1228 days
84.2
U1040
0 years, male, NA, stage:T2N0M0, alive, 1029 days
81.6
U0438
0 years, female, NA, stage:T3N0M0, alive, 2009 days
79.8
U0180
0 years, male, NA, stage:T3N0M1, dead, 965 days
79.6
U0002
0 years, female, NA, stage:T3N2M0, alive, 3691 days
79.5
U2753
0 years, female, NA, stage:T2N0M0, alive, 813 days
79.3
U0152
0 years, male, NA, stage:T3N1M0, alive, 989 days
78.9
U1250
0 years, male, NA, stage:T2N0M0, alive, 597 days
78.0
U0095
0 years, male, NA, stage:T4N1M0, dead, 1034 days
78.0
U0073
0 years, male, NA, stage:T4N0MX, dead, 318 days
77.9
U1208
0 years, female, NA, stage:T1N0M0, alive, 834 days
77.3
U3048
0 years, male, NA, stage:T4N2M0, alive, 535 days
77.2
U0236
0 years, male, NA, stage:T3N1M0, alive, 1842 days
76.9
U1103
0 years, female, NA, stage:T4N2M0, alive, 975 days
76.9
U0269
0 years, female, NA, stage:T3N0M0, alive, 2530 days
75.9
U0340
0 years, female, NA, stage:T4N2M1, dead, 438 days
75.7
U0004
0 years, female, NA, stage:T4N0M0, alive, 3649 days
75.7
U0185
0 years, male, NA, stage:T1N0M0, alive, 1248 days
75.0
U0459
0 years, female, NA, stage:T3N0M0, alive, 966 days
74.9
U0354
0 years, male, NA, stage:T3N1M0, alive, 430 days
74.6
U0471
0 years, female, NA, stage:T3N1M0, alive, 1673 days
74.4
U0319
0 years, male, NA, stage:T3N0M0, alive, 2801 days
74.3
U2958
0 years, female, NA, stage:T1N0M0, alive, 536 days
73.8
U0960
0 years, male, NA, stage:T3N0M0, alive, 1009 days
73.6
U1235
0 years, female, NA, stage:T2N0M0, alive, 1319 days
73.5
U0161
0 years, male, NA, stage:T4N2M1, alive, 42 days
73.0
U0426
0 years, male, NA, stage:T3N0M0, dead, 976 days
72.9
U0378
0 years, female, NA, stage:T4N1M0, dead, 815 days
72.8
U0112
0 years, female, NA, stage:T3N0M1, alive, 551 days
72.7
U0368
0 years, male, NA, stage:T2N0M0, alive, 801 days
72.6
U0209
0 years, male, NA, stage:T3N1M0, alive, 2109 days
72.4
U0163
0 years, male, NA, stage:T4N0M0, alive, 697 days
72.3
U2882
0 years, female, NA, stage:T3N1M0, alive, 637 days
72.2
U0144
0 years, male, NA, stage:T3N0M0, alive, 1218 days
72.0
U0442
0 years, male, NA, stage:T3N0M0, alive, 619 days
71.9
U1073
0 years, female, NA, stage:T3N1M0, alive, 1359 days
71.7
U1074
0 years, male, NA, stage:T3N0M0, dead, 1043 days
71.4
U0414
0 years, male, NA, stage:T3N0M0, alive, 1691 days
71.1
U0165
0 years, female, NA, stage:T2N0M0, alive, 1702 days
71.1
U0306
0 years, male, NA, stage:T3N1M0, dead, 717 days
70.9
U1049
0 years, female, NA, stage:T3N1M0, alive, 1200 days
70.3
U0177
0 years, female, NA, stage:T3N0M0, alive, 355 days
70.2
U0126
0 years, male, NA, stage:T3N0M0, dead, 2876 days
70.1
U0131
0 years, female, NA, stage:T4N2M1, alive, 238 days
70.1
U0178
0 years, female, NA, stage:T3N1M0, dead, 2096 days
70.0
U2792
0 years, male, NA, stage:T2N1M0, alive, 758 days
69.8
U1037
0 years, male, NA, stage:T4N0M0, alive, 1658 days
69.6
U0416
0 years, male, NA, stage:T1N1M0, alive, 1228 days
69.3
U0987
0 years, female, NA, stage:T3N0M0, alive, 2482 days
69.0
U1022
0 years, male, NA, stage:T4N2M0, dead, 61 days
68.9
U1253
0 years, female, NA, stage:T3N0M0, dead, 165 days
68.8
U2942
0 years, male, NA, stage:T2N0M0, alive, 549 days
68.8
U0949
0 years, female, NA, stage:T3N0M1, dead, 594 days
68.7
U1130
0 years, male, NA, stage:T2N1M0, alive, 913 days
68.6
U1303
0 years, male, NA, stage:T4N1M0, alive, 2283 days
68.4
U2843
0 years, female, NA, stage:T3N0M0, alive, 674 days
68.2
U1129
0 years, male, NA, stage:T3N0M0, dead, 118 days
68.0
U0204
0 years, male, NA, stage:T3N0M0, dead, 770 days
67.6
U0455
0 years, female, NA, stage:T3N2M0, alive, 2445 days
67.0
U0244
0 years, female, NA, stage:T3N1M0, alive, 3184 days
66.7
U0094
0 years, female, NA, stage:T3N2M0, alive, 741 days
66.5
U0110
0 years, female, NA, stage:T3N1M1, dead, 878 days
66.3
U0288
0 years, male, NA, stage:T1N0M0, alive, 1513 days
66.3
U0387
0 years, male, NA, stage:T2N0M0, alive, 1327 days
65.9
U1432
0 years, female, NA, stage:T3N1M0, alive, 577 days
65.9
U1162
0 years, male, NA, stage:T2N1M0, dead, 354 days
65.8
U1155
0 years, male, NA, stage:T4N1M0, alive, 1815 days
65.7
U0937
0 years, male, NA, stage:T2N0M0, dead, 1558 days
65.5
U1147
0 years, male, NA, stage:T3N0M0, dead, 282 days
65.4
U3024
0 years, female, NA, stage:T3N0M0, alive, 463 days
65.4
U0326
0 years, female, NA, stage:T3N0M0, alive, 3178 days
65.3
U0249
0 years, female, NA, stage:T4N2M0, dead, 874 days
65.3
U2948
0 years, female, NA, stage:T3N1M0, alive, 543 days
64.8
U0972
0 years, female, NA, stage:T1N0M0, alive, 2473 days
64.8
U2927
0 years, male, NA, stage:T3N1M0, alive, 564 days
64.5
U0257
0 years, male, NA, stage:T3N1M0, dead, 2508 days
64.4
U0154
0 years, male, NA, stage:T3N0M0, alive, 820 days
64.3
U0309
0 years, female, NA, stage:T3N0M0, dead, 1898 days
64.2
U1075
0 years, female, NA, stage:T3N0M0, alive, 1290 days
64.2
U0292
0 years, male, NA, stage:T4N1M0, alive, 1666 days
64.1
U0240
0 years, female, NA, stage:T3N1M0, dead, 800 days
64.1
U2896
0 years, female, NA, stage:T3N1M0, alive, 609 days
63.8
U0345
0 years, female, NA, stage:T3N0M0, alive, 2127 days
63.8
U0398
0 years, female, NA, stage:T3N0M0, alive, 721 days
63.7
U0290
0 years, male, NA, stage:T4N2M0, dead, 593 days
63.6
U3032
0 years, female, NA, stage:T3N1M0, alive, 449 days
63.6
U1212
0 years, female, NA, stage:T2N0M0, alive, 69 days
63.5
U1120
0 years, male, NA, stage:T4N1M1, alive, 823 days
63.5
U0267
0 years, male, NA, stage:T4N0M0, dead, 445 days
63.4
U1062
0 years, female, NA, stage:T4N0M0, alive, 1689 days
63.4
U0355
0 years, male, NA, stage:T4N1M0, dead, 1038 days
63.4
U1344
0 years, female, NA, stage:T3N1M0, alive, 1450 days
63.3
U0967
0 years, male, NA, stage:T2N0M0, dead, 1691 days
63.3
U0433
0 years, male, NA, stage:T4N1M1, dead, 440 days
63.2
U0369
0 years, female, NA, stage:T3N0M0, dead, 1095 days
63.1
U0302
0 years, male, NA, stage:T1N0M0, alive, 892 days
62.9
U1429
0 years, female, NA, stage:T3N0M0, alive, 1660 days
62.7
U0133
0 years, female, NA, stage:T3N0M0, alive, 773 days
62.6
U0977
0 years, female, NA, stage:T4N2M0, dead, 140 days
62.6
U0436
0 years, male, NA, stage:T4N1M1, alive, 960 days
62.3
U0275
0 years, female, NA, stage:T3N2M0, alive, 549 days
62.2
U1366
0 years, male, NA, stage:T3N1M0, alive, 2010 days
62.2
U0215
0 years, male, NA, stage:T3N0M0, alive, 1269 days
62.1
U0950
0 years, female, NA, stage:T4N1M0, alive, 1834 days
61.9
U0183
0 years, male, NA, stage:T3N1M1, dead, 2957 days
61.8
U3018
0 years, male, NA, stage:T4N1M0, alive, 463 days
61.6
U0070
0 years, male, NA, stage:T1N0M0, dead, 1319 days
61.6
U0363
0 years, male, NA, stage:T3N1M0, alive, 3601 days
61.5
U0399
0 years, female, NA, stage:T4N2M0, dead, 547 days
61.4
U0976
0 years, female, NA, stage:T3N2M0, dead, 97 days
61.4
U0225
0 years, male, NA, stage:T3N1M0, alive, 581 days
61.3
U0383
0 years, male, NA, stage:T3N2M1, dead, 595 days
61.2
U0463
0 years, male, NA, stage:T3N0M0, alive, 946 days
61.2
U2999
0 years, female, NA, stage:T2N0M0, alive, 581 days
61.1
U2964
0 years, male, NA, stage:T3N1M0, alive, 637 days
60.9
U0427
0 years, male, NA, stage:T2N0M0, alive, 1193 days
60.9
U0260
0 years, male, NA, stage:T1N0M1, alive, 2928 days
60.9
U0227
0 years, female, NA, stage:T4N2M0, alive, 291 days
60.7
U0472
0 years, male, NA, stage:TXN2M0, alive, 542 days
60.7
U0231
0 years, female, NA, stage:T2N0M0, alive, 991 days
60.5
U2861
0 years, male, NA, stage:T3N0M0, alive, 652 days
60.4
U1041
0 years, male, NA, stage:T2N0M0, alive, 1108 days
60.3
U0287
0 years, female, NA, stage:T2N0M0, alive, 1897 days
60.3
U0171
0 years, female, NA, stage:T3N1M0, dead, 1920 days
60.3
U1321
0 years, male, NA, stage:T3N1M0, alive, 2578 days
60.2
U0172
0 years, male, NA, stage:T4N0M0, dead, 678 days
60.2
U0285
0 years, female, NA, stage:T3N0M0, alive, 2165 days
60.0
U0360
0 years, female, NA, stage:T3N0M0, dead, 1016 days
60.0
U1257
0 years, male, NA, stage:T3N0M0, alive, 833 days
59.9
U0119
0 years, female, NA, stage:T3N0M0, alive, 3259 days
59.7
U0451
0 years, female, NA, stage:T4N2M0, alive, 3023 days
59.7
U3100
0 years, male, NA, stage:T3N1M0, dead, 1608 days
59.7
U0394
0 years, male, NA, stage:T2N1M0, alive, 969 days
59.7
U0358
0 years, female, NA, stage:T4N1M0, alive, 2290 days
59.6
U2837
0 years, female, NA, stage:T4N1M0, alive, 681 days
59.5
U0103
0 years, female, NA, stage:T3N1M0, alive, 1197 days
59.5
U2928
0 years, male, NA, stage:T2N0M0, alive, 563 days
59.3
U1241
0 years, male, NA, stage:T3N1M0, dead, 49 days
59.0
U1240
0 years, male, NA, stage:T4N0M0, alive, 765 days
58.9
U0233
0 years, female, NA, stage:T3N1M0, alive, 975 days
58.8
U0084
0 years, male, NA, stage:T3N0M0, dead, 1662 days
58.8
U1094
0 years, female, NA, stage:T4N1M0, alive, 1267 days
58.7
U0444
0 years, female, NA, stage:T4N1M0, alive, 1841 days
58.7
U1046
0 years, female, NA, stage:T4N2M1, dead, 697 days
58.7
U0068
0 years, female, NA, stage:T3N1M0, alive, 1991 days
58.6
U0123
0 years, male, NA, stage:T3N0M0, dead, 1880 days
58.6
U1447
0 years, male, NA, stage:T4N1M0, alive, 988 days
58.6
U0323
0 years, male, NA, stage:T2N0M0, dead, 1016 days
58.5
U0332
0 years, female, NA, stage:T3N0M0, alive, 2101 days
58.5
U1349
0 years, female, NA, stage:T3N1M0, alive, 1899 days
58.3
U0121
0 years, male, NA, stage:T4N2M0, alive, 655 days
58.2
U0083
0 years, male, NA, stage:T4N0M0, dead, 731 days
58.2
U0087
0 years, female, NA, stage:T3N2M0, dead, 337 days
58.2
U3029
0 years, male, NA, stage:T2N0M0, alive, 475 days
58.1
U1454
0 years, female, NA, stage:T3N0M0, alive, 393 days
58.1
U1127
0 years, female, NA, stage:T3N0M0, alive, 3465 days
58.1
U1274
0 years, male, NA, stage:T2N1M0, alive, 1198 days
58.1
U1332
0 years, male, NA, stage:T3N0M0, alive, 1672 days
58.0
U0411
0 years, female, NA, stage:T3N1M0, alive, 1868 days
58.0
U0157
0 years, male, NA, stage:T4N0M0, dead, 131 days
58.0
U0149
0 years, female, NA, stage:T3N2M0, alive, 1715 days
57.9
U1474
0 years, female, NA, stage:T1N0MX, alive, 2012 days
57.8
U0403
0 years, male, NA, stage:T3N1M1, dead, 1809 days
57.7
U0179
0 years, male, NA, stage:T3N1M0, dead, 1043 days
57.7
U0445
0 years, female, NA, stage:T3N0M0, alive, 1851 days
57.7
U1239
0 years, male, NA, stage:T2N0M0, dead, 1998 days
57.7
U3012
0 years, male, NA, stage:T3N0M0, alive, 472 days
57.6
U1060
0 years, male, NA, stage:T3N0M0, alive, 2442 days
57.6
U0450
0 years, female, NA, stage:T3N1M0, alive, 763 days
57.5
U0145
0 years, male, NA, stage:T3N1M1, alive, 623 days
57.3
U1374
0 years, male, NA, stage:T4N0M0, alive, 827 days
57.3
U0447
0 years, male, NA, stage:T4N1M0, dead, 1819 days
57.3
U3122
0 years, female, NA, stage:T3N0M1, dead, 91 days
57.2
U0429
0 years, female, NA, stage:T3N0M1, alive, 1099 days
57.2
U0335
0 years, female, NA, stage:T3N1M0, alive, 2464 days
57.2
U0328
0 years, male, NA, stage:T4N0M0, dead, 1362 days
57.1
U0467
0 years, female, NA, stage:T3N0M0, alive, 1848 days
57.1
U1220
0 years, male, NA, stage:T3N2M0, dead, 1953 days
57.0
U0200
0 years, female, NA, stage:T3N0M0, alive, 2614 days
57.0
U2959
0 years, male, NA, stage:T3N2M0, alive, 536 days
56.9
U0124
0 years, female, NA, stage:T1N0M0, alive, 2430 days
56.7
U0229
0 years, female, NA, stage:TXN2M1, dead, 2115 days
56.7
U0069
0 years, female, NA, stage:T4N2M0, dead, 135 days
56.7
U1473
0 years, female, NA, stage:T3N0M0, alive, 1553 days
56.7
U0117
0 years, female, NA, stage:T2N0M0, dead, 1078 days
56.7
U0199
0 years, female, NA, stage:T4N2M0, alive, 1372 days
56.5
U0474
0 years, male, NA, stage:T3N1M0, alive, 1017 days
56.5
U3051
0 years, male, NA, stage:T3N2M0, alive, 415 days
56.4
U1396
0 years, female, NA, stage:T4N0M0, alive, 1168 days
56.3
U1095
0 years, female, NA, stage:T3N1M1, alive, 2425 days
56.3
U3008
0 years, female, NA, stage:T2N0M0, alive, 473 days
56.2
U0134
0 years, male, NA, stage:T3N0M0, alive, 2009 days
56.2
U0338
0 years, female, NA, stage:T3N0M0, alive, 1016 days
56.2
U0268
0 years, male, NA, stage:T3N0M0, alive, 2978 days
56.0
U1338
0 years, female, NA, stage:T4N1M0, dead, 716 days
56.0
U0109
0 years, female, NA, stage:T4N2M1, alive, 144 days
56.0
U0966
0 years, male, NA, stage:T4N0M0, dead, 1513 days
56.0
U0195
0 years, male, NA, stage:T3N0M0, alive, 3326 days
55.9
U0127
0 years, female, NA, stage:T3N0M0, dead, 2753 days
55.9
U1114
0 years, female, NA, stage:TXNXM1, dead, 473 days
55.8
U1017
0 years, male, NA, stage:T3N0M0, alive, 615 days
55.7
U0984
0 years, female, NA, stage:T4N0M0, alive, 1287 days
55.7
U1102
0 years, male, NA, stage:T2N0M0, alive, 1354 days
55.7
U0321
0 years, female, NA, stage:T3N0M0, alive, 1029 days
55.4
U0999
0 years, male, NA, stage:T3N2M0, alive, 860 days
55.4
U0357
0 years, female, NA, stage:T3N0M0, alive, 2285 days
55.4
U0375
0 years, male, NA, stage:T3N0M0, dead, 666 days
55.4
U2774
0 years, female, NA, stage:T3N0M0, alive, 783 days
55.3
U0460
0 years, female, NA, stage:T3N0M0, dead, 2069 days
55.2
U0176
0 years, male, NA, stage:T3N1M0, alive, 2600 days
55.1
U2803
0 years, male, NA, stage:T3N1M0, alive, 744 days
55.1
U0589
0 years, female, NA, stage:T3N0M0, alive, 1176 days
55.1
U1472
0 years, female, NA, stage:T3N1M0, alive, 1316 days
55.1
U0250
0 years, female, NA, stage:T4N0M0, dead, 906 days
55.0
U0336
0 years, female, NA, stage:T3N0M0, alive, 1100 days
54.9
U0146
0 years, female, NA, stage:T3N2M0, dead, 733 days
54.9
U1448
0 years, male, NA, stage:T3N0M1, dead, 1512 days
54.8
U0379
0 years, male, NA, stage:T2N0M0, alive, 1819 days
54.7
U0129
0 years, male, NA, stage:T4N0M0, dead, 1265 days
54.7
U1078
0 years, female, NA, stage:T3N0M0, alive, 1016 days
54.7
U2782
0 years, male, NA, stage:T3N1M1, alive, 773 days
54.7
U2971
0 years, male, NA, stage:T4aN0M0, alive, 629 days
54.6
U0101
0 years, male, NA, stage:T3N1M1, alive, 1878 days
54.6
U0266
0 years, female, NA, stage:T3N1M0, dead, 2221 days
54.6
U0125
0 years, female, NA, stage:T1N0M0, dead, 668 days
54.6
U0136
0 years, female, NA, stage:T3N0M0, dead, 2795 days
54.6
U1045
0 years, female, NA, stage:T4N2M0, alive, 1239 days
54.6
U2981
0 years, male, NA, stage:T3N0M0, alive, 508 days
54.5
U0384
0 years, male, NA, stage:T2N1M1, alive, 1024 days
54.5
U0098
0 years, male, NA, stage:T3N0M0, dead, 2473 days
54.4
U1145
0 years, female, NA, stage:T3N0M0, dead, 445 days
54.4
U0278
0 years, female, NA, stage:T2N0M0, alive, 763 days
54.3
U0448
0 years, male, NA, stage:T3N2M0, alive, 3615 days
54.3
U2975
0 years, male, NA, stage:T4N1M0, alive, 514 days
54.3
U0316
0 years, male, NA, stage:T3N2M0, alive, 2012 days
54.2
U1343
0 years, female, NA, stage:T4N2M0, alive, 3178 days
54.2
U1292
0 years, female, NA, stage:T4N1M0, alive, 1147 days
54.0
U1401
0 years, female, NA, stage:T3N0M0, alive, 1482 days
54.0
U1044
0 years, male, NA, stage:T4N0M0, alive, 3146 days
54.0
U1107
0 years, male, NA, stage:T3N0M0, alive, 329 days
53.9
U3005
0 years, male, NA, stage:T3N0M0, alive, 478 days
53.8
U0942
0 years, male, NA, stage:T3N0M0, alive, 665 days
53.8
U2798
0 years, male, NA, stage:T3N0M0, alive, 751 days
53.8
U1034
0 years, male, NA, stage:T4N0M0, alive, 1575 days
53.7
U3034
0 years, female, NA, stage:T3N1M0, alive, 443 days
53.6
U0259
0 years, female, NA, stage:T4N2M0, alive, 76 days
53.5
U1047
0 years, female, NA, stage:T4N2M0, alive, 3592 days
53.4
U0222
0 years, female, NA, stage:T3N2M1, alive, 1779 days
53.4
U0142
0 years, female, NA, stage:T4N1M0, alive, 2340 days
53.4
U0441
0 years, female, NA, stage:T2N1M0, alive, 2738 days
53.4
U2947
0 years, female, NA, stage:T3N0M0, alive, 543 days
53.4
U2819
0 years, female, NA, stage:T3N0M0, alive, 708 days
53.4
U1111
0 years, female, NA, stage:T3N0M0, dead, 1631 days
53.4
U3022
0 years, male, NA, stage:T2N0M0, alive, 484 days
53.3
U1228
0 years, male, NA, stage:T3N0M0, alive, 1333 days
53.2
U2747
0 years, female, NA, stage:T4N1M0, dead, 54 days
53.2
U0122
0 years, female, NA, stage:T2N0M0, dead, 159 days
53.1
U0376
0 years, male, NA, stage:T2N1M0, alive, 965 days
53.0
U1421
0 years, female, NA, stage:T3N1M0, alive, 1905 days
53.0
U1346
0 years, female, NA, stage:T3N0M0, alive, 1137 days
52.9
U1069
0 years, female, NA, stage:T3N0M0, dead, 2187 days
52.9
U0420
0 years, male, NA, stage:T4N1M1, alive, 417 days
52.9
U0091
0 years, male, NA, stage:T3N0M0, alive, 520 days
52.9
U0313
0 years, male, NA, stage:T4N1M0, dead, 1142 days
52.8
U1072
0 years, male, NA, stage:T1N0M0, alive, 1446 days
52.8
U1150
0 years, female, NA, stage:T3N0M0, alive, 15 days
52.8
U0314
0 years, female, NA, stage:T1N0M0, dead, 2436 days
52.8
U0218
0 years, female, NA, stage:T3N0M0, alive, 714 days
52.6
U2891
0 years, male, NA, stage:T3N1M0, alive, 619 days
52.5
U1018
0 years, male, NA, stage:T4N1M1, dead, 1693 days
52.5
U0352
0 years, female, NA, stage:T4N2M0, dead, 385 days
52.5
U0300
0 years, male, NA, stage:T2N0M0, alive, 974 days
52.4
U0223
0 years, male, NA, stage:T4N1M0, alive, 1812 days
52.3
U0270
0 years, female, NA, stage:T1N0M0, alive, 2187 days
52.1
U1204
0 years, male, NA, stage:T4N2M0, alive, 2214 days
52.1
U0221
0 years, male, NA, stage:T3N0M0, alive, 569 days
52.1
U1099
0 years, female, NA, stage:T3N0M0, alive, 2068 days
52.1
U0235
0 years, female, NA, stage:T3N0M0, alive, 1327 days
52.0
U0100
0 years, female, NA, stage:T3N0M0, dead, 1920 days
52.0
U0955
0 years, female, NA, stage:T3N0M0, alive, 2170 days
51.9
U0102
0 years, female, NA, stage:T4N2M0, dead, 670 days
51.9
U0469
0 years, male, NA, stage:T3N0M0, dead, 409 days
51.8
U0143
0 years, male, NA, stage:T3N2M0, alive, 2313 days
51.8
U0162
0 years, female, NA, stage:T3N0M0, alive, 1488 days
51.8
U0377
0 years, female, NA, stage:T3N2M0, alive, 3720 days
51.7
U2902
0 years, female, NA, stage:T2N0M0, alive, 596 days
51.6
U0929
0 years, male, NA, stage:T4N1M0, alive, 436 days
51.6
U0348
0 years, female, NA, stage:T3N0M0, alive, 533 days
51.6
U0254
0 years, female, NA, stage:T3N1M0, alive, 659 days
51.6
U0186
0 years, female, NA, stage:T2N0M0, alive, 3726 days
51.4
U0342
0 years, male, NA, stage:T4N2M0, alive, 305 days
51.3
U1347
0 years, female, NA, stage:T3N0M0, alive, 1401 days
51.3
U0396
0 years, male, NA, stage:T4N2M0, alive, 2243 days
51.3
U0465
0 years, male, NA, stage:T3N0M0, alive, 2383 days
51.2
U0453
0 years, male, NA, stage:T3N0M0, alive, 2859 days
51.2
U1184
0 years, male, NA, stage:T4N1M0, alive, 290 days
51.2
U0239
0 years, male, NA, stage:T2N0M0, alive, 67 days
51.1
U0202
0 years, male, NA, stage:T3N0M0, dead, 2670 days
51.1
U0939
0 years, male, NA, stage:T3N1M0, alive, 2960 days
51.1
U0361
0 years, male, NA, stage:T3N0M0, alive, 686 days
51.1
U0456
0 years, male, NA, stage:T4N0M0, dead, 2222 days
51.0
U0063
0 years, male, NA, stage:T1N0M0, dead, 1779 days
51.0
U3000
0 years, female, NA, stage:T3N0M0, alive, 584 days
51.0
U0067
0 years, female, NA, stage:T3N0M0, alive, 2180 days
51.0
U0356
0 years, male, NA, stage:T4N1M0, alive, 536 days
50.9
U2842
0 years, female, NA, stage:T4N2M0, alive, 675 days
50.9
U0439
0 years, male, NA, stage:T3N1M0, alive, 1418 days
50.8
U0590
0 years, female, NA, stage:T3N0M0, alive, 661 days
50.8
U0217
0 years, female, NA, stage:T3N0M0, dead, 538 days
50.8
U0303
0 years, female, NA, stage:T3N0M0, alive, 2847 days
50.8
U0281
0 years, male, NA, stage:T3N2M0, alive, 933 days
50.5
U0404
0 years, female, NA, stage:T3N2M0, dead, 204 days
50.4
U0435
0 years, female, NA, stage:T2N0M0, alive, 3616 days
50.2
U2889
0 years, male, NA, stage:T4N0M0, alive, 623 days
50.1
U0081
0 years, male, NA, stage:T3N2M0, dead, 248 days
50.1
U0389
0 years, female, NA, stage:T3N1M0, dead, 927 days
49.9
U1486
0 years, female, NA, stage:T4N0M0, alive, 1606 days
49.9
U0382
0 years, female, NA, stage:T3N0M0, alive, 2550 days
49.8
U1369
0 years, male, NA, stage:T3N0M0, dead, 1604 days
49.7
U0397
0 years, male, NA, stage:T4N0M0, alive, 1663 days
49.7
U0247
0 years, female, NA, stage:T3N1M0, alive, 2538 days
49.7
U0882
0 years, male, NA, stage:T3N0M0, alive, 1675 days
49.6
U0085
0 years, male, NA, stage:T4N1M0, dead, 1698 days
49.6
U0277
0 years, male, NA, stage:T2N1M0, alive, 270 days
49.5
U0207
0 years, female, NA, stage:T3N0M0, dead, 2593 days
49.5
U0365
0 years, female, NA, stage:T4N1M0, dead, 313 days
49.5
U1031
0 years, male, NA, stage:T1N1M0, alive, 1625 days
49.5
U0938
0 years, female, NA, stage:T3N0M0, dead, 1231 days
49.5
U1436
0 years, female, NA, stage:T3N0M0, alive, 1745 days
49.4
U0066
0 years, male, NA, stage:T3N0M0, dead, 2486 days
49.4
U0182
0 years, female, NA, stage:T4N1M0, dead, 260 days
49.4
U0464
0 years, male, NA, stage:T3N0M0, alive, 918 days
49.4
U1251
0 years, male, NA, stage:T4N2M0, alive, 126 days
49.3
U2780
0 years, male, NA, stage:T3N0M0, alive, 778 days
49.3
U2979
0 years, male, NA, stage:T3N2M0, alive, 616 days
49.2
U2995
0 years, female, NA, stage:T3N1M0, alive, 491 days
49.2
U0181
0 years, female, NA, stage:T1N0M0, alive, 3623 days
49.2
U0370
0 years, female, NA, stage:T3N0M0, alive, 1047 days
49.2
U3039
0 years, male, NA, stage:T4N1M1, dead, 366 days
49.1
U0175
0 years, male, NA, stage:T3N2M0, alive, 1875 days
49.1
U0392
0 years, male, NA, stage:T3N2M0, alive, 489 days
49.1
U0111
0 years, male, NA, stage:T2N0M0, alive, 1117 days
49.0
U0090
0 years, female, NA, stage:T3N0M0, dead, 1258 days
49.0
U0191
0 years, male, NA, stage:T3N1M0, alive, 900 days
48.8
U0308
0 years, male, NA, stage:T4N1M0, alive, 1075 days
48.4
U0151
0 years, female, NA, stage:T3N0M0, alive, 2014 days
48.4
U0256
0 years, male, NA, stage:T3N0M0, alive, 738 days
48.4
U1032
0 years, male, NA, stage:T3N1M0, alive, 2113 days
48.1
U1201
0 years, male, NA, stage:T3N2M0, alive, 1484 days
48.1
U0385
0 years, male, NA, stage:T3N0M0, alive, 902 days
48.0
U0248
0 years, male, NA, stage:T3N0M0, alive, 1870 days
47.9
U0234
0 years, male, NA, stage:T1N1M0, alive, 990 days
47.8
U0148
0 years, male, NA, stage:T3N0M0, alive, 1780 days
47.6
U0970
0 years, female, NA, stage:T4N1M0, alive, 939 days
47.6
U0462
0 years, female, NA, stage:T4N1M0, alive, 1017 days
47.5
U0440
0 years, female, NA, stage:T4N0M0, dead, 2743 days
47.5
U0252
0 years, male, NA, stage:T3N1M0, dead, 1761 days
47.5
U0916
0 years, female, NA, stage:T3N0M0, alive, 1578 days
47.5
U1122
0 years, female, NA, stage:T3N2M0, alive, 1675 days
47.5
U0274
0 years, male, NA, stage:T3N0M0, dead, 1570 days
47.4
U0189
0 years, female, NA, stage:T3N0M0, dead, 1823 days
47.4
U0347
0 years, female, NA, stage:T4N1M1, alive, 628 days
47.3
U0449
0 years, female, NA, stage:T3N0M0, alive, 1851 days
47.2
U0158
0 years, male, NA, stage:T1N0M0, dead, 3101 days
47.1
U1317
0 years, male, NA, stage:T4N1M0, alive, 965 days
47.1
U0072
0 years, male, NA, stage:T3N0M0, alive, 2772 days
47.1
U1386
0 years, male, NA, stage:T3N1M0, alive, 1518 days
47.0
U0099
0 years, female, NA, stage:T3N0M0, dead, 986 days
46.9
U0933
0 years, male, NA, stage:T3N2M0, dead, 1960 days
46.8
U0386
0 years, female, NA, stage:T4N1M1, alive, 2592 days
46.7
U0156
0 years, female, NA, stage:T4N1M0, alive, 1573 days
46.7
U0473
0 years, male, NA, stage:T3N1M0, alive, 786 days
46.6
U0106
0 years, female, NA, stage:T3N1M0, dead, 653 days
46.5
U0198
0 years, male, NA, stage:T3N1M0, alive, 1272 days
46.4
U0373
0 years, female, NA, stage:T3N0M0, alive, 1822 days
46.3
U0245
0 years, female, NA, stage:T3N1M0, dead, 564 days
46.3
U0253
0 years, female, NA, stage:T3N0M0, alive, 958 days
46.3
U0246
0 years, female, NA, stage:T4N0M0, dead, 1192 days
46.3
U0381
0 years, male, NA, stage:T3N1M0, dead, 71 days
46.1
U0350
0 years, female, NA, stage:T4N0M0, alive, 770 days
46.1
U0446
0 years, male, NA, stage:T2N0M0, alive, 1446 days
46.0
U0915
0 years, female, NA, stage:T3N0M0, alive, 1613 days
46.0
U1258
0 years, male, NA, stage:T3N1M0, alive, 1373 days
46.0
U2848
0 years, female, NA, stage:T4N2M0, alive, 669 days
45.9
U1301
0 years, female, NA, stage:T4N2M0, dead, 877 days
45.9
U0312
0 years, female, NA, stage:T4N2M1, alive, 499 days
45.9
U0295
0 years, male, NA, stage:T3N0M0, dead, 2572 days
45.5
U2754
0 years, male, NA, stage:T4N0M0, alive, 809 days
45.4
U0280
0 years, male, NA, stage:T3N1M1, alive, 2731 days
45.4
U1188
0 years, female, NA, stage:T3N0M0, dead, 967 days
45.3
U2953
0 years, female, NA, stage:T4aN0M0, alive, 541 days
45.3
U0153
0 years, female, NA, stage:T3N0M0, dead, 1718 days
45.2
U1483
0 years, female, NA, stage:T3N0M0, alive, 1094 days
45.2
U0307
0 years, male, NA, stage:T3N0M0, alive, 2921 days
45.2
U0315
0 years, female, NA, stage:T2N0M0, alive, 1973 days
45.1
U0408
0 years, female, NA, stage:T4N0M0, dead, 2100 days
45.1
U1352
0 years, male, NA, stage:T3N2M1, dead, 741 days
44.9
U0421
0 years, male, NA, stage:T3N1M0, alive, 674 days
44.8
U1213
0 years, female, NA, stage:T2N0M0, alive, 560 days
44.7
U0390
0 years, male, NA, stage:T3N1M0, alive, 871 days
44.7
U1067
0 years, male, NA, stage:T3N0M0, alive, 1570 days
44.7
U1071
0 years, female, NA, stage:T4N0M1, alive, 1514 days
44.5
U0187
0 years, male, NA, stage:T3N2M0, alive, 1632 days
44.4
U0428
0 years, male, NA, stage:T4N1M1, alive, 1016 days
44.4
U1104
0 years, female, NA, stage:T4N0M0, alive, 1109 days
44.3
U0318
0 years, male, NA, stage:T3N0M0, alive, 762 days
44.3
U1446
0 years, female, NA, stage:T3N0M0, alive, 2314 days
44.3
U1158
0 years, female, NA, stage:T3N1M0, alive, 721 days
44.1
U0327
0 years, male, NA, stage:T4N0M0, alive, 833 days
44.0
U1291
0 years, female, NA, stage:T3N0M0, alive, 2000 days
43.9
U0078
0 years, female, NA, stage:T3N0M0, alive, 1183 days
43.8
U0135
0 years, female, NA, stage:T3N0M0, alive, 1738 days
43.7
U3038
0 years, male, NA, stage:T3N0M0, alive, 328 days
43.6
U0107
0 years, male, NA, stage:T3N0M0, dead, 2354 days
43.5
U0991
0 years, male, NA, stage:T4N2M0, dead, 534 days
43.4
U0141
0 years, male, NA, stage:T3N2M0, alive, 2079 days
43.3
U0289
0 years, female, NA, stage:T3N0M0, alive, 3511 days
43.3
U3025
0 years, male, NA, stage:T4N2M1, alive, 377 days
43.3
U1141
0 years, female, NA, stage:T4N1M1, dead, 596 days
43.2
U0273
0 years, male, NA, stage:T2N1M0, alive, 2641 days
43.2
U2956
0 years, female, NA, stage:T3N0M0, alive, 540 days
43.1
U0169
0 years, male, NA, stage:T4N2M0, alive, 616 days
43.0
U0166
0 years, female, NA, stage:T3N0M0, alive, 763 days
42.8
U1264
0 years, female, NA, stage:T3N0M0, dead, 1583 days
42.7
U0367
0 years, female, NA, stage:T3N1M0, alive, 3075 days
42.6
U2935
0 years, male, NA, stage:T4N1M0, alive, 555 days
42.6
U1267
0 years, male, NA, stage:T3N1M0, dead, 2869 days
42.6
U0089
0 years, female, NA, stage:T1NXM0, dead, 2365 days
42.5
U0297
0 years, female, NA, stage:T3N2M0, alive, 1196 days
42.4
U0214
0 years, male, NA, stage:T4N1M1, alive, 788 days
42.4
U1059
0 years, male, NA, stage:T3N1M0, alive, 2790 days
42.2
U3043
0 years, female, NA, stage:T3N2M0, alive, 287 days
42.1
U0113
0 years, male, NA, stage:T4N2M0, alive, 1102 days
41.9
U3042
0 years, male, NA, stage:T3N0M0, alive, 324 days
41.9
U0208
0 years, female, NA, stage:T3N1M0, dead, 1233 days
41.9
U0898
0 years, female, NA, stage:T4aN0M0, dead, 340 days
41.7
U0320
0 years, female, NA, stage:T4N2M1, alive, 188 days
41.6
U1304
0 years, female, NA, stage:TXNXM0, alive, 1081 days
41.6
U0263
0 years, female, NA, stage:T3N0M1, alive, 362 days
41.4
U1160
0 years, male, NA, stage:T3N1M0, alive, 1557 days
41.2
U0167
0 years, male, NA, stage:T3N1M0, alive, 1820 days
41.2
U1246
0 years, female, NA, stage:T3N0M0, alive, 1441 days
41.2
U1086
0 years, female, NA, stage:T1N0M0, alive, 2907 days
41.1
U0362
0 years, male, NA, stage:T3N0M0, alive, 1148 days
41.1
U0211
0 years, female, NA, stage:T3N1M0, alive, 1236 days
41.0
U0105
0 years, female, NA, stage:T2N0M0, dead, 2158 days
40.8
U0092
0 years, male, NA, stage:T3N0M0, alive, 2779 days
40.8
U1392
0 years, male, NA, stage:T3N0M0, alive, 1513 days
40.7
U0443
0 years, male, NA, stage:T3N0M0, alive, 1677 days
40.5
U0333
0 years, female, NA, stage:T3N2M0, dead, 1959 days
40.5
U1252
0 years, female, NA, stage:T4N2M0, alive, 1309 days
40.5
U3030
0 years, female, NA, stage:T3N0M0, alive, 380 days
40.2
U0210
0 years, male, NA, stage:T3N0M0, dead, 1800 days
40.2
U0108
0 years, female, NA, stage:T3N0M1, alive, 535 days
39.8
U1065
0 years, female, NA, stage:T3N2M0, alive, 2954 days
39.7
U0224
0 years, female, NA, stage:T3N0M0, alive, 2367 days
38.8
U0196
0 years, male, NA, stage:T3N0M0, alive, 2086 days
38.6
U1327
0 years, female, NA, stage:T3N0M0, alive, 1613 days
38.4
U2815
0 years, female, NA, stage:T3N0M0, alive, 717 days
38.2
U0401
0 years, male, NA, stage:T4N1M0, alive, 1715 days
38.0
U0934
0 years, female, NA, stage:T3N0M0, alive, 1185 days
37.9
U0082
0 years, female, NA, stage:T3N1M0, dead, 2339 days
37.7
U0400
0 years, male, NA, stage:T4N0M0, dead, 1073 days
37.7
U2856
0 years, female, NA, stage:T4N1M1, alive, 660 days
37.5
U0993
0 years, male, NA, stage:T4N2M0, alive, 1267 days
37.4
U0424
0 years, male, NA, stage:T3N0M0, alive, 2192 days
36.9
U0344
0 years, male, NA, stage:T2N1M0, dead, 818 days
36.7
U3050
0 years, female, NA, stage:T3N0M0, alive, 407 days
36.6
U0203
0 years, male, NA, stage:T3N0M0, dead, 827 days
36.3
U1183
0 years, male, NA, stage:T4N2M0, alive, 959 days
36.2
U0075
0 years, male, NA, stage:T3N0M0, dead, 3 days
36.0
U1013
0 years, female, NA, stage:T2N1M0, alive, 1439 days
35.7
U0193
0 years, male, NA, stage:T3N1M0, dead, 876 days
34.8
U0170
0 years, male, NA, stage:T4N1M0, dead, 832 days
34.8
U0262
0 years, female, NA, stage:T2N0M0, alive, 2534 days
33.9
U0104
0 years, female, NA, stage:T4N0M0, dead, 1639 days
33.8
U0908
0 years, female, NA, stage:T3N0M1, dead, 40 days
33.4
U3037
0 years, male, NA, stage:T3N1M0, alive, 405 days
33.4
U0115
0 years, female, NA, stage:T3N0M0, dead, 1738 days
32.6
U0349
0 years, male, NA, stage:T3N1M0, alive, 2682 days
31.4
U1007
0 years, male, NA, stage:T3N0M0, alive, 1333 days
30.3
U0317
0 years, female, NA, stage:T3N2M0, alive, 3209 days
26.0
U1384
0 years, male, NA, stage:T4N1M0, alive, 1319 days
3.1
U0074
0 years, female, NA, stage:T3N0M0, dead, 1438 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMARCC2 is not prognostic in Rectum Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.0
Number of samples
88
Samples
Sample
Description
TPM
TCGA-EI-6507-01A
0 years, male, white, stage:Stage IIA, alive, 607 days
53.2
TCGA-EI-7002-01A
0 years, male, white, stage:Stage IV, alive, 364 days
43.3
TCGA-EI-6513-01A
0 years, male, white, stage:Stage IIIB, alive, 497 days
40.0
TCGA-DC-6156-01A
0 years, male, white, stage:Stage IVA, alive, 943 days
39.5
TCGA-CL-5917-01A
0 years, female, white, stage:Stage IIIC, alive, 2376 days
39.2
TCGA-EI-6508-01A
0 years, female, white, stage:Stage IIIB, alive, 636 days
39.2
TCGA-AH-6549-01A
0 years, male, white, stage:'--, alive, 532 days
39.0
TCGA-AG-3732-01A
0 years, female, stage:Stage I, alive, 1003 days
38.9
TCGA-DC-6683-01A
0 years, male, white, stage:Stage IIIB, alive, 762 days
38.0
TCGA-EI-6510-01A
0 years, female, white, stage:'--, alive, 556 days
37.7
TCGA-EI-6512-01A
0 years, female, white, stage:Stage IIIB, alive, 538 days
37.6
TCGA-EI-6885-01A
0 years, female, white, stage:Stage IV, alive, 415 days
37.5
TCGA-CI-6620-01A
0 years, female, white, stage:Stage IVA, alive, 1009 days
37.4
TCGA-EI-6882-01A
0 years, male, white, stage:Stage IIA, alive, 262 days
36.2
TCGA-DC-6158-01A
0 years, male, white, stage:Stage I, dead, 334 days
36.1
TCGA-F5-6864-01A
0 years, female, white, stage:Stage IIIB, alive, 379 days
34.7
TCGA-G5-6233-01A
0 years, male, white, stage:'--, dead, 556 days
31.9
TCGA-F5-6811-01A
0 years, female, white, stage:Stage IIA, alive, 979 days
31.3
TCGA-F5-6464-01A
0 years, female, white, stage:Stage IIIC, dead, 303 days
31.3
TCGA-EI-6884-01A
0 years, male, white, stage:Stage IIIA, alive, 328 days
31.3
TCGA-DC-6157-01A
0 years, male, black or african american, stage:Stage I, alive, 1581 days
31.1
TCGA-AG-3731-01A
0 years, male, stage:Stage IV, alive, 1126 days
31.0
TCGA-DY-A1DG-01A
0 years, male, white, stage:Stage IVA, dead, 1566 days
31.0
TCGA-EI-6511-01A
0 years, male, white, stage:Stage IIIB, alive, 482 days
30.8
TCGA-F5-6465-01A
0 years, female, white, stage:Stage IIA, alive, 1506 days
30.6
TCGA-F5-6861-01A
0 years, female, white, stage:Stage IIA, alive, 1160 days
30.1
TCGA-F5-6571-01A
0 years, female, white, stage:Stage IIA, alive, 1288 days
30.0
TCGA-AF-6672-01A
0 years, male, white, stage:Stage IV, alive, 748 days
29.9
TCGA-F5-6863-01A
0 years, female, white, stage:Stage IIIB, dead, 361 days
29.9
TCGA-DY-A1DE-01A
0 years, female, white, stage:Stage IIA, alive, 3932 days
29.6
TCGA-F5-6702-01A
0 years, male, white, stage:Stage IVA, dead, 869 days
29.6
TCGA-AH-6897-01A
0 years, male, white, stage:Stage I, alive, 804 days
29.2
TCGA-DC-6160-01A
0 years, male, white, stage:Stage I, alive, 1339 days
29.2
TCGA-AF-A56N-01A
0 years, female, black or african american, stage:Stage IIA, alive, 360 days
28.8
TCGA-G5-6572-01A
0 years, male, white, stage:'--, dead, 1432 days
28.6
TCGA-DY-A0XA-01A
0 years, female, white, stage:Stage IIA, alive, 3846 days
28.5
TCGA-AH-6643-01A
0 years, male, white, stage:Stage IIIC, dead, 1314 days
28.2
TCGA-AG-4021-01A
0 years, female, stage:Stage IV, dead, 121 days
28.0
TCGA-EI-6506-01A
0 years, female, white, stage:Stage IIA, alive, 625 days
27.8
TCGA-AF-2687-01A
0 years, male, white, stage:Stage IIIC, alive, 1427 days
27.8
TCGA-AH-6644-01A
0 years, male, white, stage:'--, alive, 838 days
27.0
TCGA-EI-7004-01A
0 years, female, white, stage:'--, alive, 257 days
26.9
TCGA-EI-6917-01A
0 years, male, white, stage:Stage IIIA, alive, 531 days
26.7
TCGA-DC-6681-01A
0 years, female, white, stage:Stage IVA, alive, 790 days
26.6
TCGA-EI-6514-01A
0 years, female, white, stage:Stage IIA, alive, 496 days
26.1
TCGA-EF-5831-01A
0 years, male, white, stage:Stage IIA, alive, 127 days
26.1
TCGA-G5-6641-01A
0 years, male, white, stage:Stage IIIA, alive, 804 days
25.8
TCGA-AF-A56L-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2007 days
25.7
TCGA-AF-6655-01A
0 years, male, white, stage:Stage IIIA, alive, 609 days
25.7
TCGA-F5-6814-01A
0 years, male, white, stage:Stage IIA, alive, 1131 days
25.5
TCGA-AF-3911-01A
0 years, male, white, stage:Stage IIIC, alive, 1148 days
25.3
TCGA-AF-2693-01A
0 years, male, white, stage:Stage I, alive, 1155 days
24.8
TCGA-DC-6154-01A
0 years, female, white, stage:Stage IVA, alive, 365 days
24.6
TCGA-DC-6682-01A
0 years, male, white, stage:Stage IIA, alive, 762 days
24.4
TCGA-AG-4022-01A
0 years, female, stage:Stage II, alive, 1400 days
24.1
TCGA-CL-4957-01A
0 years, female, stage:'--, dead, 425 days
24.0
TCGA-CI-6621-01A
0 years, male, white, stage:Stage IIIB, alive, 419 days
23.9
TCGA-EI-6881-01A
0 years, male, white, stage:Stage IIIA, alive, 499 days
23.7
TCGA-F5-6813-01A
0 years, male, white, stage:Stage IIIC, dead, 598 days
23.5
TCGA-AF-6136-01A
0 years, female, white, stage:Stage IIIB, alive, 741 days
23.3
TCGA-EI-6883-01A
0 years, male, white, stage:Stage IIC, alive, 350 days
23.3
TCGA-AF-A56K-01A
0 years, male, black or african american, stage:Stage IIA, alive, 2635 days
23.1
TCGA-AG-3742-01A
0 years, female, stage:Stage I, alive, 30 days
23.0
TCGA-F5-6812-01A
0 years, male, white, stage:Stage IIA, alive, 1110 days
23.0
TCGA-AG-3592-01A
0 years, male, stage:Stage IIA, alive, 1035 days
23.0
TCGA-DT-5265-01A
0 years, male, asian, stage:Stage II, alive, 384 days
22.5
TCGA-DY-A1DC-01A
0 years, female, white, stage:Stage IIA, dead, 1258 days
22.1
TCGA-AH-6547-01A
0 years, female, white, stage:'--, dead, 76 days
21.9
TCGA-AF-5654-01A
0 years, female, white, stage:Stage I, dead, 512 days
21.8
TCGA-EF-5830-01A
0 years, male, white, stage:Stage IIB, alive, 106 days
21.5
TCGA-AG-3902-01A
0 years, male, stage:Stage IIA, alive, 974 days
21.1
TCGA-DC-4749-01A
0 years, male, white, stage:Stage I, alive, 762 days
21.0
TCGA-CI-6622-01A
0 years, male, white, stage:Stage IIB, alive, 1362 days
20.8
TCGA-EI-6509-01A
0 years, male, white, stage:Stage IIIC, alive, 517 days
20.8
TCGA-DY-A1DD-01A
0 years, female, white, stage:Stage IIIB, dead, 1741 days
19.9
TCGA-G5-6235-01A
0 years, male, white, stage:Stage IIIB, alive, 1696 days
19.7
TCGA-DC-5869-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 943 days
19.6
TCGA-AH-6903-01A
0 years, male, white, stage:Stage IIIB, alive, 592 days
19.4
TCGA-DY-A1H8-01A
0 years, female, white, stage:Stage IIIA, dead, 992 days
19.1
TCGA-AF-4110-01A
0 years, male, white, stage:Stage IVA, alive, 912 days
17.9
TCGA-BM-6198-01A
0 years, male, white, stage:Stage IIIB, alive, 646 days
17.8
TCGA-AH-6544-01A
0 years, male, white, stage:'--, alive, 1173 days
17.6
TCGA-AF-2690-01A
0 years, female, white, stage:Stage IIIC, dead, 524 days
15.5
TCGA-AG-3591-01A
0 years, female, stage:Stage IIA, alive, 1035 days
15.1
TCGA-DC-4745-01A
0 years, female, white, stage:Stage IIIB, alive, 639 days
11.6
TCGA-DY-A1DF-01A
0 years, female, white, stage:Stage IIIC, dead, 734 days
11.5
TCGA-DC-5337-01A
0 years, male, white, stage:Stage I, alive, 792 days
9.4
TCGA-DC-6155-01A
0 years, female, white, stage:Stage IIIA, alive, 425 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMARCC2 is not prognostic in Rectum Adenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
54.3
Number of samples
207
Samples
Sample
Description
TPM
U0216
0 years, male, NA, stage:T2N0M0, alive, 2684 days
87.7
U0114
0 years, male, NA, stage:T3N0M0, alive, 1910 days
86.0
U0468
0 years, female, NA, stage:T3N0M0, alive, 1921 days
80.6
U0512
0 years, male, NA, stage:T3N0M0, alive, 2550 days
80.1
U0351
0 years, female, NA, stage:T3N2M0, alive, 2886 days
76.8
U0282
0 years, male, NA, stage:T3N2M0, dead, 1869 days
76.5
U0418
0 years, male, NA, stage:T4N1M0, alive, 1246 days
75.3
U0241
0 years, female, NA, stage:T2N1M0, alive, 552 days
74.6
U0430
0 years, male, NA, stage:T3N2M0, dead, 2472 days
74.4
U0645
0 years, male, NA, stage:T3N0M0, alive, 1567 days
73.9
U0431
0 years, female, NA, stage:T3N1M0, alive, 695 days
73.4
U0800
0 years, male, NA, stage:T3N2M1, dead, 411 days
73.1
U2836
0 years, male, NA, stage:T3N0M0, alive, 322 days
72.4
U0137
0 years, male, NA, stage:T3N1M0, dead, 1799 days
70.4
U0422
0 years, female, NA, stage:T3N2M1, dead, 1710 days
69.7
U2955
0 years, male, NA, stage:T3N1M0, alive, 181 days
69.6
U0638
0 years, male, NA, stage:T2N0M0, alive, 1801 days
69.2
U0001
0 years, female, NA, stage:T3N0M0, alive, 3188 days
69.1
U0658
0 years, male, NA, stage:T3N2M0, alive, 1108 days
68.4
U0388
0 years, male, NA, stage:T2N1M0, alive, 2186 days
67.7
U0641
0 years, female, NA, stage:T3N0M0, dead, 1626 days
66.7
U0466
0 years, male, NA, stage:T3N0M0, alive, 1381 days
66.4
U0343
0 years, female, NA, stage:T2N0M0, alive, 701 days
66.3
U0802
0 years, male, NA, stage:T3N2M1, dead, 338 days
66.2
U2761
0 years, female, NA, stage:T3N1M0, alive, 447 days
65.7
U0077
0 years, female, NA, stage:T2N0M0, dead, 588 days
65.3
U0578
0 years, male, NA, stage:T2N2M0, alive, 1724 days
65.3
U0294
0 years, male, NA, stage:T4N0M1, alive, 561 days
65.0
U0173
0 years, male, NA, stage:T2N0M0, dead, 2375 days
64.7
U0174
0 years, male, NA, stage:T3N0M0, alive, 450 days
64.2
U0380
0 years, male, NA, stage:T2N0M0, alive, 2155 days
64.0
U0194
0 years, male, NA, stage:T3N1M0, alive, 680 days
63.9
U0258
0 years, male, NA, stage:T4N1M2, dead, 195 days
63.9
U0650
0 years, female, NA, stage:T2N2M0, alive, 1331 days
63.5
U0415
0 years, male, NA, stage:T3N1M0, alive, 2526 days
63.4
U0484
0 years, male, NA, stage:T4N2M0, alive, 1275 days
63.2
U0086
0 years, female, NA, stage:T3N1M0, dead, 594 days
63.2
U0255
0 years, female, NA, stage:T3N2M0, dead, 1079 days
62.8
U0228
0 years, male, NA, stage:T2N0M0, alive, 963 days
62.7
U0293
0 years, male, NA, stage:T3N1M0, alive, 2717 days
62.5
U0654
0 years, male, NA, stage:T3N2M0, alive, 1220 days
62.4
U0325
0 years, male, NA, stage:T3N0M0, dead, 1947 days
62.1
U0434
0 years, male, NA, stage:T2N0M0, alive, 2558 days
62.0
U0579
0 years, female, NA, stage:T4aN0M0, alive, 2845 days
62.0
U0334
0 years, male, NA, stage:T3N1M0, alive, 3171 days
61.6
U0502
0 years, male, NA, stage:T4N1M0, alive, 1065 days
61.4
U0279
0 years, male, NA, stage:T2N1M0, dead, 176 days
61.3
U0155
0 years, male, NA, stage:T2N0M0, dead, 1672 days
61.2
U0695
0 years, male, NA, stage:T3N0M0, alive, 566 days
61.1
U0359
0 years, male, NA, stage:T3N2M0, dead, 2443 days
61.0
U0591
0 years, male, NA, stage:T2N0M0, alive, 1023 days
60.7
U0637
0 years, male, NA, stage:T3N1M0, alive, 1997 days
60.7
U0311
0 years, female, NA, stage:T3N1M0, alive, 1176 days
60.7
U0213
0 years, male, NA, stage:T3N1M0, alive, 3018 days
60.6
U0030
0 years, female, NA, stage:T2N0M0, dead, 987 days
60.6
U0238
0 years, male, NA, stage:T3N0M0, dead, 868 days
60.4
U2960
0 years, male, NA, stage:T3N1M0, alive, 176 days
60.0
U3049
0 years, male, NA, stage:T2N0M0, alive, 533 days
59.9
U0852
0 years, male, NA, stage:T3N2M1, alive, 1651 days
59.9
U0643
0 years, female, NA, stage:T2N1M0, dead, 1583 days
59.7
U0423
0 years, female, NA, stage:T4N2M0, alive, 2735 days
59.5
U0304
0 years, male, NA, stage:T3N2M0, alive, 2065 days
58.7
U0553
0 years, female, NA, stage:T3N2M0, alive, 1704 days
58.7
U0230
0 years, female, NA, stage:T1N1M0, alive, 3152 days
58.5
U0604
0 years, male, NA, stage:T3N1M0, alive, 1522 days
58.4
U0296
0 years, male, NA, stage:T3N0M0, alive, 2610 days
58.4
U0243
0 years, female, NA, stage:T3N2M0, alive, 2975 days
58.3
U0406
0 years, female, NA, stage:T4N2M1, dead, 778 days
58.2
U0603
0 years, male, NA, stage:T2N1M0, alive, 1904 days
58.2
U0713
0 years, male, NA, stage:T2N0M0, alive, 359 days
58.1
U0080
0 years, female, NA, stage:T3N0M0, dead, 489 days
58.1
U0138
0 years, male, NA, stage:T3N1M0, dead, 2472 days
58.0
U0605
0 years, male, NA, stage:T2N0M0, alive, 952 days
58.0
U0562
0 years, female, NA, stage:T3N1M0, alive, 3092 days
57.8
U0545
0 years, male, NA, stage:T3N0M0, alive, 2340 days
57.7
U0264
0 years, male, NA, stage:T4N2M0, alive, 2020 days
57.6
U0305
0 years, male, NA, stage:T3N1M0, alive, 2676 days
57.6
U2972
0 years, male, NA, stage:T3N0M0, alive, 161 days
57.6
U0640
0 years, male, NA, stage:T2N0M0, alive, 1696 days
57.4
U0565
0 years, male, NA, stage:T4N1M0, alive, 1452 days
57.1
U0652
0 years, male, NA, stage:T3N0M0, alive, 1319 days
57.0
U0212
0 years, male, NA, stage:T3N0M1, alive, 1330 days
56.8
U0192
0 years, male, NA, stage:T3N0M0, alive, 2081 days
56.4
U0535
0 years, female, NA, stage:T4N1M0, alive, 2473 days
56.3
U2991
0 years, female, NA, stage:T1N0M0, alive, 135 days
56.2
U0353
0 years, female, NA, stage:T1N0M0, alive, 2912 days
56.2
U0251
0 years, male, NA, stage:T2N0M0, alive, 1906 days
56.1
U0595
0 years, male, NA, stage:T2N0M0, alive, 2535 days
56.0
U0116
0 years, male, NA, stage:T3N1M0, dead, 930 days
55.9
U0485
0 years, male, NA, stage:T3N0M0, dead, 2737 days
55.9
U0750
0 years, female, NA, stage:T3N2M0, dead, 1393 days
55.9
U0324
0 years, female, NA, stage:T4N1M0, alive, 938 days
55.9
U0232
0 years, female, NA, stage:T2N0M0, dead, 994 days
55.9
U0805
0 years, male, NA, stage:T3N1M1, dead, 731 days
55.7
U0572
0 years, female, NA, stage:T3N1M0, alive, 2621 days
55.2
U0849
0 years, female, NA, stage:T4N0M1, dead, 267 days
55.2
U2834
0 years, male, NA, stage:T3N1M0, alive, 323 days
55.2
U0568
0 years, male, NA, stage:T4N1M0, alive, 1287 days
54.8
U2764
0 years, male, NA, stage:T3N2M0, alive, 440 days
54.7
U0407
0 years, male, NA, stage:T3N1M0, dead, 2027 days
54.5
U0284
0 years, male, NA, stage:T3N2M0, alive, 581 days
54.2
U0220
0 years, male, NA, stage:T2N0M0, alive, 1066 days
53.9
U2994
0 years, female, NA, stage:T4N1M0, alive, 132 days
53.8
U0793
0 years, male, NA, stage:T3N1M1, dead, 195 days
53.7
U0538
0 years, female, NA, stage:T3N1M0, alive, 1308 days
53.7
U0848
0 years, male, NA, stage:T3N1M1, dead, 1185 days
53.7
U0079
0 years, male, NA, stage:T4N2M0, dead, 1891 days
53.6
U0088
0 years, male, NA, stage:T3N1M1, dead, 260 days
53.6
U0865
0 years, female, NA, stage:T3N1M1, dead, 856 days
53.5
U0299
0 years, female, NA, stage:T4N2M0, alive, 43426 days
53.3
U0508
0 years, male, NA, stage:T3N1M0, alive, 1120 days
53.1
U0803
0 years, female, NA, stage:T3N1M1, dead, 495 days
53.0
U0861
0 years, female, NA, stage:T4N2M1, dead, 184 days
52.8
U0128
0 years, female, NA, stage:T3N1M0, alive, 449 days
52.7
U0577
0 years, female, NA, stage:T3N2M0, alive, 2474 days
52.6
U0346
0 years, male, NA, stage:T4N2M0, alive, 1148 days
52.6
U0405
0 years, male, NA, stage:T3N1M0, alive, 829 days
52.4
U0437
0 years, male, NA, stage:T1N1M0, alive, 849 days
52.3
U0132
0 years, male, NA, stage:T3N1M0, alive, 1798 days
52.2
U0857
0 years, male, NA, stage:T4N2M1, dead, 954 days
52.1
U0402
0 years, female, NA, stage:T3N1M0, dead, 2487 days
52.1
U0561
0 years, female, NA, stage:T3N2M0, alive, 1577 days
52.0
U0651
0 years, male, NA, stage:T3N0M0, alive, 1354 days
52.0
U0862
0 years, male, NA, stage:T4N2M1, dead, 1064 days
51.9
U0519
0 years, male, NA, stage:T4N2M0, dead, 519 days
51.9
U0649
0 years, male, NA, stage:T2N0M0, alive, 1424 days
51.9
U0242
0 years, male, NA, stage:T3N0M0, alive, 2950 days
51.9
U0147
0 years, female, NA, stage:T3N0M0, dead, 2085 days
51.7
U0374
0 years, female, NA, stage:T2N0M0, alive, 1067 days
51.7
U0558
0 years, female, NA, stage:T3N2M0, alive, 2011 days
51.6
U0409
0 years, female, NA, stage:T3N1M0, alive, 934 days
51.6
U0600
0 years, male, NA, stage:T3N1M0, alive, 1659 days
51.6
U0552
0 years, male, NA, stage:T3N2M0, alive, 1701 days
51.5
U0417
0 years, female, NA, stage:T3N2M1, dead, 893 days
51.2
U0533
0 years, male, NA, stage:T3N2M0, alive, 2248 days
51.2
U0814
0 years, female, NA, stage:T3N1M1, dead, 482 days
51.0
U0642
0 years, male, NA, stage:T3N0M0, alive, 1603 days
50.6
U0557
0 years, female, NA, stage:T3N2M0, alive, 2009 days
50.6
U0555
0 years, male, NA, stage:T3N2M0, alive, 2043 days
50.5
U0331
0 years, male, NA, stage:T3N1M1, dead, 906 days
50.5
U0707
0 years, male, NA, stage:T3N1M0, alive, 518 days
50.3
U0532
0 years, male, NA, stage:T3N0M0, dead, 730 days
49.9
U2943
0 years, male, NA, stage:T3N0M0, alive, 189 days
49.4
U0809
0 years, female, NA, stage:T3N1M1, dead, 275 days
49.3
U0542
0 years, male, NA, stage:T3N2M0, dead, 1482 days
49.0
U0498
0 years, female, NA, stage:T4N1M0, alive, 1906 days
48.9
U0339
0 years, male, NA, stage:T3N2M0, alive, 2155 days
48.9
U0657
0 years, female, NA, stage:T2N0M0, dead, 1109 days
48.2
U0584
0 years, male, NA, stage:T3N2M0, alive, 2705 days
48.1
U0271
0 years, female, NA, stage:T3N1M0, alive, 2414 days
48.0
U0592
0 years, female, NA, stage:T2N0M0, dead, 670 days
47.9
U0364
0 years, female, NA, stage:T4N2M1, dead, 151 days
47.5
U0601
0 years, female, NA, stage:T4N1M0, alive, 1368 days
47.4
U0593
0 years, male, NA, stage:T4bN0M0, alive, 876 days
47.3
U0594
0 years, male, NA, stage:T3N0M0, alive, 2852 days
47.2
U0276
0 years, male, NA, stage:T3N1M1, alive, 934 days
47.2
U0454
0 years, male, NA, stage:T3N1M0, alive, 2997 days
47.0
U0602
0 years, male, NA, stage:T2N0M0, alive, 1385 days
46.8
U0550
0 years, male, NA, stage:T3N2M0, alive, 2191 days
46.7
U0820
0 years, male, NA, stage:T3NXM1, dead, 622 days
46.6
U0494
0 years, male, NA, stage:T4N2M0, alive, 1290 days
46.6
U0666
0 years, male, NA, stage:T3N1M0, alive, 709 days
46.4
U0391
0 years, female, NA, stage:T3N0M0, alive, 1179 days
46.3
U0457
0 years, male, NA, stage:T3N0M0, alive, 833 days
46.3
U0776
0 years, male, NA, stage:T4N2M0, alive, 1702 days
45.6
U0120
0 years, female, NA, stage:T3N0M0, alive, 3233 days
45.5
U0648
0 years, female, NA, stage:T3N0M0, alive, 1415 days
45.4
U0322
0 years, male, NA, stage:T4N2M0, alive, 1694 days
45.3
U0587
0 years, male, NA, stage:T3N1M0, alive, 2107 days
45.1
U0804
0 years, female, NA, stage:T3N2M1, dead, 380 days
44.9
U0647
0 years, female, NA, stage:T3N0M0, alive, 1476 days
44.9
U0694
0 years, male, NA, stage:T4N0M0, dead, 489 days
44.8
U0366
0 years, male, NA, stage:T3NXM1, alive, 895 days
44.6
U0096
0 years, female, NA, stage:T4N2M1, dead, 257 days
44.4
U0686
0 years, female, NA, stage:T4bN0M0, dead, 123 days
43.8
U0371
0 years, female, NA, stage:T3N0M0, alive, 2688 days
43.6
U0159
0 years, female, NA, stage:T3N1M0, alive, 1517 days
43.6
U2779
0 years, male, NA, stage:T3N0M0, alive, 419 days
43.0
U0205
0 years, female, NA, stage:T3N2M0, alive, 2984 days
43.0
U0329
0 years, male, NA, stage:T3N1M0, dead, 805 days
42.6
U0581
0 years, female, NA, stage:T3N2M0, alive, 1660 days
42.6
U0478
0 years, male, NA, stage:T4N2M0, alive, 2051 days
42.3
U3023
0 years, female, NA, stage:T2N0M0, alive, 404 days
42.2
U0097
0 years, male, NA, stage:T3N0M1, dead, 2903 days
42.0
U3047
0 years, male, NA, stage:T3N2M0, alive, 205 days
41.9
U0470
0 years, female, NA, stage:T2N2M0, alive, 961 days
41.5
U0458
0 years, male, NA, stage:T3N2M0, alive, 1073 days
41.4
U0492
0 years, male, NA, stage:T3N2M0, alive, 1114 days
41.4
U0140
0 years, male, NA, stage:T3N2M0, alive, 2655 days
41.0
U0663
0 years, female, NA, stage:T3N1M0, alive, 762 days
40.5
U0511
0 years, female, NA, stage:T3N0M0, dead, 2387 days
40.3
U0656
0 years, male, NA, stage:T3N2M0, alive, 1150 days
40.1
U0497
0 years, female, NA, stage:T3N1M0, alive, 1414 days
40.1
U0675
0 years, female, NA, stage:T4N1M0, dead, 89 days
40.0
U0237
0 years, male, NA, stage:T3N1M0, alive, 2492 days
40.0
U0671
0 years, male, NA, stage:T3N1M0, dead, 785 days
39.3
U0596
0 years, male, NA, stage:T3N0M0, alive, 2233 days
39.3
U0514
0 years, female, NA, stage:T2N2M0, alive, 2799 days
39.2
U0190
0 years, male, NA, stage:T3N0M0, alive, 2367 days
39.1
U0118
0 years, female, NA, stage:T3N2M0, dead, 350 days
38.9
U0539
0 years, male, NA, stage:T4N2M0, alive, 2017 days
38.7
U0556
0 years, male, NA, stage:T3N2M0, alive, 2037 days
37.5
U0298
0 years, male, NA, stage:T3N1M0, alive, 513 days
37.1
U0188
0 years, female, NA, stage:T3N1M0, alive, 2134 days
34.8
U0534
0 years, female, NA, stage:T3N2M0, alive, 1361 days
34.6
U0576
0 years, male, NA, stage:T3N2M0, alive, 2540 days
30.8
U0093
0 years, male, NA, stage:T3N2M0, dead, 1118 days
7.4
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COLON ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
197
Samples
Sample ID
Sample type
nRPX
cd89ffbb-574a-4052-bd9a-00c890_D2
Tumor
0.6
41ee934e-f7a3-4ef5-8a83-e2ac56_D2
Tumor
0.4
87408d9e-4029-4e8f-b14c-8efc04_D3
Tumor
0.4
ec9afcc4-ccf7-4226-b0e8-d6897d_D3
Tumor
0.4
6e20c8e9-ab75-4996-9296-445b00_D2
Tumor
0.4
37219a7c-6fe2-4684-a494-d0be08_D2
Tumor
0.4
aa0f5b40-3290-4255-8f4d-f45d4e_D3
Tumor
0.4
4bb08fad-fa5e-471e-978b-6b09ab_D2
Tumor
0.3
8b9e4266-7754-4f2c-ac9e-329905_D2
Tumor
0.3
820a3f08-5bb1-44b3-a133-ee167e_D2
Tumor
0.3
f6afe41c-111d-4818-8485-fe95e0_D2
Tumor
0.3
e196a0b4-2a05-43de-bb30-ceb761_D2
Tumor
0.3
f69deaeb-6b6f-4c61-8900-fd0f26_D3
Tumor
0.3
c65afd57-530c-4366-b2c8-463a46_D2
Tumor
0.2
79097be1-cd36-4a23-99d1-3d744f_D2
Tumor
0.2
092c5a37-325b-4181-b230-2d8fff_D2
Tumor
0.2
321fb3b2-ebb6-4ea5-b737-081264_D2
Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Normal
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Normal
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Normal
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
0d5554d1-1653-4589-a44f-43113e_D2
Normal
0.0
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Tumor
-0.1
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Normal
-0.1
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Normal
-0.1
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Normal
-0.1
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Normal
-0.1
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Normal
-0.1
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Normal
-0.1
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Normal
-0.1
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Normal
-0.1
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Normal
-0.1
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Normal
-0.1
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Normal
-0.1
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Normal
-0.1
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Tumor
-0.1
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Normal
-0.1
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Normal
-0.1
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Normal
-0.1
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Tumor
-0.1
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Normal
-0.1
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Normal
-0.1
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Normal
-0.1
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Tumor
-0.1
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Tumor
-0.1
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Normal
-0.1
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Normal
-0.1
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Normal
-0.1
db3f5ad9-d14d-4126-a3e7-d80faa_D3
Tumor
-0.1
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Normal
-0.1
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Normal
-0.1
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Tumor
-0.1
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Normal
-0.1
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Normal
-0.1
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Normal
-0.1
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Tumor
-0.1
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Normal
-0.1
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Tumor
-0.1
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Normal
-0.1
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Normal
-0.1
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Normal
-0.1
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Normal
-0.1
411d9597-c785-4de5-b449-29a80d_D2
Normal
-0.1
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Normal
-0.1
cc271b3d-ed33-481f-9d23-15f2f6_D2
Normal
-0.1
cd3a9d59-bf13-48f3-ae97-bdbca4_D2
Normal
-0.1
dffcac99-9eac-4717-aeb6-f4a2e7_D8
Tumor
-0.2
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Normal
-0.2
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Normal
-0.2
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Normal
-0.2
067db520-1b1f-4569-9414-e37a6e_D2
Normal
-0.2
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Normal
-0.2
63c1f7ac-b1ae-4c28-95aa-ce21e5_D2
Normal
-0.2
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Tumor
-0.2
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Normal
-0.2
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Normal
-0.2
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Normal
-0.2
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Normal
-0.2
da95f6f8-be46-4ed8-a493-2c99f0_D2
Normal
-0.2
853ecf90-71e6-4156-a56f-a34b65_D2
Normal
-0.2
694e8df1-d9ee-473b-bec1-4f9237_D2
Normal
-0.2
fc9b09af-23b8-4ffe-b6c6-41236d_D2
Normal
-0.2
6797a69d-2f74-44b9-8147-cd4fac_D2
Normal
-0.2
d8805fa4-30f9-4417-907e-fdc50c_D2
Normal
-0.2
a243b765-61ab-4aa6-88e1-226896_D2
Normal
-0.2
233ec093-9a30-4ef4-a12c-91757e_D2
Normal
-0.2
7784e2e5-c0e1-4b85-8cc1-7faac8_D2
Normal
-0.2
526c3664-5b9b-4a2b-a00e-a14623_D2
Tumor
-0.2
c307b7b0-534a-45fa-a420-35f773_D2
Normal
-0.2
8af80ae9-2088-4124-91fb-8d6c17_D3
Tumor
-0.2
0aef1fe8-ca61-4113-81d0-d82ee7_D2
Tumor
-0.2
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Normal
-0.2
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Tumor
-0.3
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Normal
-0.3
51590333-cfe5-4ce5-b8ff-58fa3c_D2
Normal
-0.3
efee6bb9-69dd-46c2-85b3-b55962_D2
Normal
-0.3
5a3aa99d-ca10-45f6-939f-12392a_D2
Normal
-0.4
b2400046-1d25-429d-a821-6040a6
Tumor
-0.4
1136008b-97ce-49b0-bf24-abbea6_D2
Normal
-0.4
Show allShow less
COLORECTAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
