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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
98.4
nTPM
HPA Brain:
72.4
nTPM
GTEx:
98.4
nTPM
FANTOM5:
246.5
Scaled Tags Per Million
Pig:
66.2
nTPM
Mouse:
183.6
nTPM
Allen mouse:
6.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
72.4
Sample id
Sample description
nTPM
Amygdala nTPM: 72.4
2814
Male, age 76, right hemisphere
85.6
2514
Male, age 75, right hemisphere
78.4
1987
Female, age 91, left hemisphere
73.3
2695
Female, age 67, right hemisphere
66.5
2517
Female, age 94, left hemisphere
58.1
Basal amygdala nTPM: 59.3
1955
Male, age 76, both hemispheres
70.9
2609
Male, age 75, right hemisphere
67.7
2110
Male, age 80, left hemisphere
66.3
2243
Female, age 91, right hemisphere
60.0
2685
Female, age 94, left hemisphere
49.4
2827
Female, age 67, right hemisphere
41.1
Central amygdala nTPM: 64.9
1905
Male, age 76, both hemispheres
78.9
2515
Male, age 75, right hemisphere
72.5
2239
Male, age 80, left hemisphere
63.0
2701
Female, age 91, right hemisphere
62.3
2826
Female, age 94, left hemisphere
47.7
Corticomedial amygdala nTPM: 63.9
2428
Male, age 75, right hemisphere
79.3
2829
Male, age 80, left hemisphere
70.8
2429
Female, age 94, left hemisphere
69.0
2240
Male, age 76, both hemispheres
65.6
2242
Female, age 91, right hemisphere
60.3
2535
Female, age 67, right hemisphere
38.1
Lateral amygdala nTPM: 59.4
1883
Male, age 76, both hemispheres
81.4
2516
Male, age 75, right hemisphere
67.5
2256
Male, age 80, left hemisphere
54.9
2534
Female, age 94, left hemisphere
53.5
2255
Female, age 91, right hemisphere
51.2
2830
Female, age 67, right hemisphere
48.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
98.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 98.4
Samples: 152
Max nTPM: 154.4
Min nTPM: 61.7
Std nTPM: 19.4
Median nTPM: 96.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
154.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
149.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
147.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
146.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
142.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
141.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
140.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
136.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
134.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
132.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
130.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
128.9
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
128.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
127.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
126.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
125.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
121.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
121.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
120.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
120.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
117.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
117.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
116.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
116.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
114.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
114.1
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
114.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
113.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
113.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
113.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
112.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
112.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
112.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
112.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
111.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
111.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
110.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
110.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
110.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
110.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
110.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
109.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
109.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
109.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
109.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
108.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
108.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
106.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
106.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
106.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
105.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
105.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
104.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
104.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
104.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
103.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
103.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
102.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
102.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
102.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
101.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
101.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
100.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
100.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
100.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
100.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
99.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
99.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
99.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
99.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
99.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
99.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
98.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
98.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
98.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
96.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
96.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
95.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
95.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
95.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
95.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
95.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
94.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
94.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
93.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
93.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
93.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
93.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
93.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
92.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
91.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
91.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
91.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
91.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
91.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
90.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
90.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
89.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
89.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
88.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
88.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
88.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
88.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
86.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
86.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
86.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
85.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
85.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
85.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
84.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
84.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
84.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
84.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
84.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
84.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
83.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
83.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
82.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
82.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
82.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
80.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
80.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
79.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
79.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
79.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
79.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
77.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
77.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
77.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
77.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
77.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
77.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
77.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
77.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
75.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
75.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
75.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
74.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
74.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
74.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
73.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
73.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
70.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
70.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
70.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
70.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
70.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
69.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
69.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
64.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
62.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
61.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
183.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 183.6
Samples: 4
Max nTPM: 188.8
Min nTPM: 179.1
Sample A
Male
186.8
Sample B
Male
179.6
Sample C
Female
188.8
Sample D
Female
179.1
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.