We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
MPDU1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

 
Field
All
Term
Gene name
Class
Blood group antigen proteins
Subclass
 
Category
 
Keyword
Chromosome
External id
Tissue
 
Cell type
 
Expression
Antibody panel
 
Tissue
 
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
 
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Yes
Data type
Column
Gene


                              • SPECIFICITY
                              • DISTRIBUTION
                              • EXPRESSION
                              • SPECIFICITY
                              • DISTRIBUTION
                              • EXPRESSION
                              • SPECIFICITY
                              • DISTRIBUTION
                              • EXPRESSION
                              • SPECIFICITY
                              • DISTRIBUTION
                              • EXPRESSION
                                  • SPECIFICITY
                                  • DISTRIBUTION
                                  • EXPRESSION
                                  • SPECIFICITY
                                  • DISTRIBUTION
                                  • EXPRESSION
                                  • SPECIFICITY
                                  • DISTRIBUTION
                                  • EXPRESSION
                                  • SPECIFICITY
                                  • DISTRIBUTION
                                  • EXPRESSION
                                  • SPECIFICITY
                                  • DISTRIBUTION
                                  • EXPRESSION
                                  • RELIABILITY
                                  • SUBCELLULAR VARIATION
                                  • MULTILOCALIZATION
                                  • OTHER
                                  • SPECIFICITY
                                  • DISTRIBUTION
                                  • EXPRESSION
                                  • SPECIFICITY
                                  • DISTRIBUTION
                                  • EXPRESSION
                                  • Check all
                                  • Uncheck all
                                          • SUMMARY

                                          • TISSUE

                                          • BRAIN

                                          • SINGLE CELL

                                          • SUBCELL

                                          • CANCER

                                          • BLOOD

                                          • CELL LINE

                                          • STRUCTURE

                                          • INTERACTION

                                          • MPDU1
                                          TISSUE PRIMARY DATA VAGINA Show tissue menu
                                          ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
                                          DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
                                          NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
                                          SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
                                          ANTIBODIES
                                          AND
                                          VALIDATION
                                          Dictionary
                                          Vagina
                                          Tissue proteome
                                          Vagina
                                          Tissue methods
                                          VAGINA - Expression summary
                                          Protein expression
                                          Vaginai

                                          On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

                                          h
                                          m
                                          l
                                          n
                                          Squamous epithelial cells: Not detected
                                          RNA expressioni

                                          A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

                                          Scroll down to view mRNA expression data in more detail.

                                          Consensus:25.5 nTPM
                                          GTEx:25.5 nTPM
                                          FANTOM5:22.1 Scaled Tags Per Million

                                          VAGINA - Antibody stainingi

                                          Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

                                          Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

                                          Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

                                          Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

                                          Antibody HPA014845
                                          Squamous epithelial cells Not detected



                                          VAGINA - GTEx RNA-seqi

                                          RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

                                          Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

                                          Max subtype nTPMi

                                          Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

                                          25.5
                                          GTEx sample id Sample description nTPM
                                          15.425.032.76.257.6010203040506070
                                          15.425.032.76.257.6010203040506070
                                          Vagina
                                          Average nTPM: 25.5
                                          Samples: 170

                                          Max nTPM: 72.7
                                          Min nTPM: 6.2
                                          Std nTPM: 12.3
                                          Median nTPM: 25.0
                                          GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 72.7
                                          GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 64.9
                                          GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 57.6
                                          GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 56.0
                                          GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 52.2
                                          GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 51.5
                                          GTEX-1MA7W-1226-SM-HL9SB 20-29 years, female 49.9
                                          GTEX-S341-1226-SM-4AD5S 40-49 years, female 49.9
                                          GTEX-11DXX-1726-SM-5H11T 60-69 years, female 49.3
                                          GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 47.1
                                          GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 47.0
                                          GTEX-14PKU-1326-SM-6871B 40-49 years, female 45.8
                                          GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 43.4
                                          GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 43.0
                                          GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 42.7
                                          GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 41.4
                                          GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 40.3
                                          GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 39.9
                                          GTEX-11I78-2026-SM-5987C 50-59 years, female 39.2
                                          GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 39.0
                                          GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 38.7
                                          GTEX-PWCY-1726-SM-48TD3 20-29 years, female 38.7
                                          GTEX-1LKK1-1826-SM-GNIPA 50-59 years, female 38.6
                                          GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 38.4
                                          GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 38.3
                                          GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 38.1
                                          GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 37.5
                                          GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 37.5
                                          GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 37.5
                                          GTEX-1CAMS-2326-SM-793CR 40-49 years, female 37.4
                                          GTEX-ZXES-0626-SM-5E45P 30-39 years, female 37.2
                                          GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 36.9
                                          GTEX-S4UY-1026-SM-4AD53 40-49 years, female 36.7
                                          GTEX-145ME-1426-SM-5RQJS 40-49 years, female 35.8
                                          GTEX-14PJ6-1626-SM-6872D 60-69 years, female 35.3
                                          GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 35.1
                                          GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 34.5
                                          GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 33.7
                                          GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 33.4
                                          GTEX-1C475-0526-SM-793AC 40-49 years, female 33.0
                                          GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 32.8
                                          GTEX-16NGA-1626-SM-72D6M 40-49 years, female 32.7
                                          GTEX-S4P3-1126-SM-4AD52 50-59 years, female 32.7
                                          GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 32.6
                                          GTEX-1399S-2326-SM-5K7YV 30-39 years, female 32.5
                                          GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 32.0
                                          GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 31.5
                                          GTEX-Q734-1426-SM-DTXFX 40-49 years, female 31.5
                                          GTEX-139D8-2626-SM-GJ3QN 30-39 years, female 31.1
                                          GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 30.9
                                          GTEX-131XG-2126-SM-5DUXG 50-59 years, female 30.6
                                          GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 30.6
                                          GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 30.4
                                          GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 30.3
                                          GTEX-PWN1-2526-SM-48TDS 40-49 years, female 30.0
                                          GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 29.8
                                          GTEX-QCQG-1226-SM-48U23 50-59 years, female 29.4
                                          GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 29.3
                                          GTEX-1399U-1526-SM-5J2N7 50-59 years, female 29.2
                                          GTEX-13D11-1326-SM-5IJFY 50-59 years, female 29.2
                                          GTEX-132AR-1626-SM-5EGHP 50-59 years, female 29.1
                                          GTEX-14JG6-0726-SM-69LQH 30-39 years, female 29.1
                                          GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 28.5
                                          GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 28.4
                                          GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 28.2
                                          GTEX-11P81-2126-SM-5HL6N 30-39 years, female 27.9
                                          GTEX-PX3G-2526-SM-48TZV 20-29 years, female 27.8
                                          GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 27.7
                                          GTEX-ZAJG-2926-SM-5HL8P 50-59 years, female 27.6
                                          GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 27.3
                                          GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 27.2
                                          GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 27.1
                                          GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 27.1
                                          GTEX-TML8-1126-SM-4DXSS 40-49 years, female 27.0
                                          GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 26.9
                                          GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 26.8
                                          GTEX-1117F-2526-SM-5GZY6 60-69 years, female 26.5
                                          GTEX-16MT8-2426-SM-GQ1DK 60-69 years, female 26.4
                                          GTEX-W5X1-2226-SM-GRR1G 40-49 years, female 26.1
                                          GTEX-14A5I-2726-SM-5MR84 50-59 years, female 26.0
                                          GTEX-T2IS-1926-SM-4DM74 20-29 years, female 26.0
                                          GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 25.9
                                          GTEX-14H4A-2426-SM-664OQ 40-49 years, female 25.5
                                          GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 25.5
                                          GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 25.4
                                          GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 24.6
                                          GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 24.3
                                          GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 23.9
                                          GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 23.9
                                          GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 23.6
                                          GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 23.0
                                          GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 23.0
                                          GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 22.9
                                          GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 22.8
                                          GTEX-11TTK-2726-SM-5GU58 60-69 years, female 22.4
                                          GTEX-R45C-2226-SM-GQ1EF 60-69 years, female 22.2
                                          GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 22.0
                                          GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 21.7
                                          GTEX-OXRK-2026-SM-GOQY5 50-59 years, female 21.7
                                          GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 21.3
                                          GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 21.0
                                          GTEX-1LGRB-2126-SM-COH48 50-59 years, female 20.2
                                          GTEX-13FTY-2026-SM-GIN9K 40-49 years, female 20.0
                                          GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 19.9
                                          GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 19.9
                                          GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 19.6
                                          GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 19.4
                                          GTEX-113JC-1926-SM-5N9GE 50-59 years, female 19.2
                                          GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 19.2
                                          GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 19.0
                                          GTEX-WI4N-2626-SM-GPI8F 40-49 years, female 18.8
                                          GTEX-ZVZQ-2726-SM-GPRY1 60-69 years, female 18.6
                                          GTEX-RNOR-2526-SM-F21KT 50-59 years, female 18.3
                                          GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 18.2
                                          GTEX-146FR-2426-SM-5NQAU 60-69 years, female 17.7
                                          GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 17.4
                                          GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 17.3
                                          GTEX-P4PP-2526-SM-3P61P 30-39 years, female 17.3
                                          GTEX-RU1J-1426-SM-46MUV 20-29 years, female 17.1
                                          GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 16.8
                                          GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 16.6
                                          GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 16.5
                                          GTEX-O5YV-2226-SM-HM8V7 60-69 years, female 16.4
                                          GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 16.2
                                          GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 16.1
                                          GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 15.5
                                          GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 15.5
                                          GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 15.4
                                          GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 14.9
                                          GTEX-XYKS-2826-SM-H7OG8 60-69 years, female 14.8
                                          GTEX-RWS6-1726-SM-47JXP 60-69 years, female 14.7
                                          GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 14.2
                                          GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 14.0
                                          GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 13.7
                                          GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 13.7
                                          GTEX-145LS-2526-SM-5TDC9 60-69 years, female 13.6
                                          GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 13.3
                                          GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 13.3
                                          GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 13.0
                                          GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 13.0
                                          GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 12.6
                                          GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 12.5
                                          GTEX-QDT8-2526-SM-48TYX 30-39 years, female 12.5
                                          GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 12.5
                                          GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 12.5
                                          GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 12.3
                                          GTEX-14PJM-2926-SM-69LOE 50-59 years, female 12.2
                                          GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 12.1
                                          GTEX-131YS-2426-SM-5J2OD 60-69 years, female 12.0
                                          GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 12.0
                                          GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 11.4
                                          GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 11.3
                                          GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 11.2
                                          GTEX-15DYW-2926-SM-6PANA 60-69 years, female 11.2
                                          GTEX-16NPV-2526-SM-6M483 50-59 years, female 11.2
                                          GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 11.1
                                          GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 10.6
                                          GTEX-183WM-2126-SM-7LG4I 70-79 years, female 10.2
                                          GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 9.9
                                          GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 9.4
                                          GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 9.2
                                          GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 9.1
                                          GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 9.1
                                          GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 9.0
                                          GTEX-RTLS-2126-SM-GPRWH 60-69 years, female 8.8
                                          GTEX-13N11-1526-SM-5L3FL 50-59 years, female 8.6
                                          GTEX-WYBS-2826-SM-GOQYI 60-69 years, female 8.2
                                          GTEX-147F3-1526-SM-5MR7L 50-59 years, female 7.7
                                          GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 6.5
                                          GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 6.2
                                          Show allShow less

                                          VAGINA - FANTOM5 CAGEi

                                          RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

                                          Max subtype Scaled Tags Per Millioni

                                          Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

                                          22.1
                                          FANTOM5 sample id Sample description Scaled Tags Per Million
                                          Vagina
                                          Scaled Tags Per Million: 22.1
                                          FF:10204-103F6 68 years, female 22.1

                                          Contact

                                          • NEWS ARTICLES
                                          • PRESS ROOM

                                          The Project

                                          • INTRODUCTION
                                          • ORGANIZATION
                                          • PUBLICATIONS

                                          The Human Protein Atlas

                                          • DOWNLOADABLE DATA
                                          • LICENCE & CITATION
                                          • HELP & FAQ
                                          KAW logo The Human Protein Atlas project is funded
                                          by the Knut & Alice Wallenberg Foundation.

                                          Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
                                          GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo