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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
132.0
nTPM
GTEx:
132.0
nTPM
FANTOM5:
290.8
Scaled Tags Per Million
Pig:
90.5
nTPM
Mouse:
223.2
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
132.0
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 132.0
Samples: 105
Max nTPM: 202.5
Min nTPM: 39.5
Std nTPM: 30.5
Median nTPM:
404_1
82 years, female
202.5
293_1
68 years, female
197.6
375_1
74 years, female
191.6
41_1
94 years, female
190.8
377_1
82 years, female
190.6
189_1
76 years, male
189.0
237_1
82 years, male
187.4
318_1
68 years, male
176.5
405_1
91 years, male
173.0
425_1
59 years, female
168.4
288_1
66 years, female
167.3
251_1
78 years, male
166.6
266_1
85 years, male
165.2
316_1
62 years, male
164.8
452_1
88 years, female
164.6
246_1
77 years, male
163.6
322_1
76 years, male
162.0
177_1
74 years, male
161.4
229_1
69 years, female
157.4
324_1
76 years, male
156.8
319_1
81 years, male
156.1
406_1
79 years, male
156.0
109_1
81 years, female
154.9
311_1
78 years, male
154.8
172_1
72 years, female
153.4
137_1
83 years, male
153.3
2_1
77 years, female
151.9
17_1
71 years, male
149.8
313_1
79 years, female
147.5
376_1
75 years, female
145.8
350_1
84 years, female
145.7
447_1
81 years, male
144.6
265_1
87 years, male
144.3
254_1
77 years, female
144.0
264_1
73 years, female
143.7
379_1
60 years, male
143.1
153_1
70 years, female
141.2
163_1
78 years, male
141.1
145_1
84 years, male
140.5
139_1
64 years, female
140.4
35_1
74 years, female
140.2
120_1
70 years, female
139.6
506_1
65 years, male
139.4
4_1
88 years, female
139.1
321_1
62 years, female
137.4
384_1
83 years, male
136.7
468_1
89 years, male
136.4
317_1
60 years, male
135.9
320_1
89 years, female
134.8
18_1
88 years, male
134.2
308_1
70 years, female
133.6
335_1
73 years, female
133.4
389_1
86 years, female
133.1
286_1
68 years, female
132.5
307_1
66 years, female
132.0
81_1
67 years, male
131.2
292_1
71 years, male
131.1
126_1
63 years, male
130.2
314_1
67 years, male
130.2
348_1
84 years, male
130.1
518_1
75 years, female
129.4
243_1
75 years, male
128.9
347_1
72 years, male
128.9
353_1
82 years, female
128.9
349_1
83 years, male
126.9
355_1
70 years, female
125.0
356_1
87 years, female
123.6
42_1
85 years, male
122.8
115_1
83 years, male
122.0
218_1
71 years, female
121.9
352_1
62 years, male
121.5
480_1
63 years, male
121.0
354_1
81 years, female
120.6
394_1
75 years, female
120.3
499_1
55 years, female
118.9
351_1
91 years, male
116.7
495_1
57 years, female
114.3
396_1
62 years, male
112.6
295_1
61 years, female
112.4
99_1
64 years, male
111.3
217_1
76 years, male
111.2
386_1
76 years, male
111.0
9_1
66 years, female
106.9
142_1
61 years, female
105.8
162_1
79 years, female
105.7
415_1
77 years, female
105.1
6_1
73 years, female
101.9
526_1
61 years, male
101.5
517_1
88 years, male
101.2
503_1
68 years, male
101.0
43_1
64 years, female
99.9
291_1
76 years, male
98.3
119_1
70 years, female
97.8
32_1
67 years, male
96.8
89_1
63 years, male
92.0
315_1
62 years, female
90.0
117_1
61 years, male
88.6
501_1
88 years, male
86.6
414_1
84 years, female
86.4
173_1
67 years, male
83.1
413_1
59 years, female
79.3
149_1
88 years, male
72.5
466_1
57 years, female
71.5
491_1
89 years, female
53.5
490_1
67 years, female
39.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
