HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:351.2 nTPM
HPA Brain:232.6 nTPM
GTEx:351.2 nTPM
FANTOM5:129.2 Scaled Tags Per Million
Pig:268.9 nTPM
Mouse:240.3 nTPM
Allen mouse:15.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006872
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 232.6
Sample id Sample description nTPM
Hippocampus
nTPM: 209.4
2621 Female, age 67, right hemisphere 242.4
1898 Male, age 80, left hemisphere 239.9
1855 Male, age 76, left hemisphere 235.0
2148 Female, age 91, left hemisphere 199.1
2529 Female, age 94, left hemisphere 195.0
1911 Female, age 85, right hemisphere 145.1
Dentate gyrus
nTPM: 204.0
2530 Female, age 94, left hemisphere 289.8
2246 Female, age 85, both hemispheres 208.3
2010 Male, age 76, both hemispheres 198.9
2531 Female, age 67, both hemispheres 181.8
1927 Female, age 91, both hemispheres 180.4
2528 Male, age 74, both hemispheres 164.8
Entorhinal gyrus
nTPM: 199.3
2613 Female, age 94, left hemisphere 228.8
2764 Male, age 80, right hemisphere 219.4
1787 Male, age 76, left hemisphere 197.0
1938 Female, age 85, left hemisphere 193.1
2686 Male, age 75, right hemisphere 189.4
2117 Female, age 91, right hemisphere 168.3
Hippocampus, CA1
nTPM: 194.5
2749 Male, age 80, left hemisphere 241.0
1873 Female, age 85, both hemispheres 219.5
2527 Male, age 74, both hemispheres 182.6
2045 Male, age 76, both hemispheres 173.5
2082 Female, age 91, right hemisphere 155.9
Hippocampus, CA2
nTPM: 194.3
1892 Male, age 76, both hemispheres 250.0
2437 Female, age 94, left hemisphere 234.1
1963 Male, age 80, left hemisphere 202.3
1940 Female, age 85, left hemisphere 179.9
2249 Male, age 74, both hemispheres 151.8
2113 Female, age 91, right hemisphere 147.6
Hippocampus, CA3
nTPM: 200.6
2861 Female, age 67, both hemispheres 237.8
2620 Female, age 94, left hemisphere 219.3
1867 Male, age 76, both hemispheres 211.1
2137 Male, age 80, left hemisphere 195.2
2436 Male, age 74, both hemispheres 178.4
1891 Female, age 85, both hemispheres 161.7
Parahippocampal cortex
nTPM: 213.5
2532 Female, age 72, left hemisphere 253.1
1850 Male, age 80, both hemispheres 243.5
2245 Female, age 91, both hemispheres 243.1
2693 Female, age 94, both hemispheres 223.1
2692 Male, age 74, both hemispheres 218.8
2622 Female, age 67, right hemisphere 215.5
1990 Female, age 91, right hemisphere 197.3
1933 Female, age 85, both hemispheres 185.7
2250 Female, age 67, right hemisphere 182.3
2018 Male, age 76, both hemispheres 172.3
Perirhinal gyrus
nTPM: 232.6
1794 Male, age 80, right hemisphere 250.2
1841 Female, age 85, right hemisphere 241.5
1847 Female, age 91, left hemisphere 231.0
2848 Male, age 76, right hemisphere 227.3
2521 Female, age 94, right hemisphere 213.2
Subiculum
nTPM: 195.8
2438 Female, age 94, left hemisphere 268.8
2042 Male, age 76, both hemispheres 194.5
1901 Male, age 80, both hemispheres 190.3
1977 Female, age 85, both hemispheres 189.4
2619 Male, age 74, both hemispheres 189.0
2729 Female, age 91, right hemisphere 143.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 351.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 351.2
Samples: 197

Max nTPM: 705.6
Min nTPM: 187.5
Std nTPM: 98.6
Median nTPM: 337.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 705.6
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 704.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 661.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 615.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 600.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 587.9
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 571.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 567.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 541.2
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 536.7
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 534.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 129.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 129.2
FF:10169-103B7 60 years, female 132.9
FF:10153-102I9 76 years, female 125.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 268.9
Pig sample Sample description nTPM
Subiculum
nTPM: 243.1
Samples: 4

Max nTPM: 287.3
Min nTPM: 215.1
Sample A Female 287.3
Sample B Female 215.1
Sample C Male 225.3
Sample D Male 244.7
Dorsal hippocampus
nTPM: 269.0
Samples: 4

Max nTPM: 359.1
Min nTPM: 210.6
Sample A Female 359.1
Sample B Female 258.3
Sample C Male 247.8
Sample D Male 210.6
Entorhinal cortex
nTPM: 188.4
Samples: 4

Max nTPM: 229.4
Min nTPM: 157.5
Sample A Female 229.4
Sample B Female 157.5
Sample C Male 201.7
Sample D Male 164.9
Ventral hippocampus
nTPM: 243.8
Samples: 4

Max nTPM: 316.9
Min nTPM: 149.2
Sample A Female 246.7
Sample B Female 149.2
Sample C Male 316.9
Sample D Male 262.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 240.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 194.5
Samples: 4

Max nTPM: 219.6
Min nTPM: 163.7
Sample A Male 188.6
Sample B Male 163.7
Sample C Female 206.0
Sample D Female 219.6
Hippocampal formation
nTPM: 240.3
Samples: 4

Max nTPM: 281.2
Min nTPM: 208.2
Sample A Male 229.9
Sample B Male 208.2
Sample C Female 281.2
Sample D Female 241.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 15.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.9
75934915 Antisense, RP_060530_01_E07, Mouse strain C57BL/6J (56 days, male) 18.8
68633113 Antisense, RP_050125_02_D09, Mouse strain C57BL/6J (56 days, male) 13.0

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