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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
357.2
nTPM
HPA Brain:
201.8
nTPM
GTEx:
357.2
nTPM
FANTOM5:
134.2
Scaled Tags Per Million
Pig:
193.3
nTPM
Mouse:
200.5
nTPM
Allen mouse:
18.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
201.8
Sample id
Sample description
nTPM
Amygdala nTPM: 190.4
2695
Female, age 67, right hemisphere
224.9
2814
Male, age 76, right hemisphere
200.6
2514
Male, age 75, right hemisphere
179.1
2517
Female, age 94, left hemisphere
178.9
1987
Female, age 91, left hemisphere
168.6
Basal amygdala nTPM: 195.9
2685
Female, age 94, left hemisphere
232.0
2243
Female, age 91, right hemisphere
225.3
2110
Male, age 80, left hemisphere
194.0
2609
Male, age 75, right hemisphere
192.2
1955
Male, age 76, both hemispheres
173.1
2827
Female, age 67, right hemisphere
158.8
Central amygdala nTPM: 201.8
2826
Female, age 94, left hemisphere
234.2
2701
Female, age 91, right hemisphere
215.6
2239
Male, age 80, left hemisphere
207.7
2515
Male, age 75, right hemisphere
189.2
1905
Male, age 76, both hemispheres
162.3
Corticomedial amygdala nTPM: 191.5
2242
Female, age 91, right hemisphere
218.2
2829
Male, age 80, left hemisphere
202.5
2240
Male, age 76, both hemispheres
198.2
2429
Female, age 94, left hemisphere
190.3
2535
Female, age 67, right hemisphere
174.8
2428
Male, age 75, right hemisphere
165.1
Lateral amygdala nTPM: 187.6
2534
Female, age 94, left hemisphere
254.3
1883
Male, age 76, both hemispheres
194.4
2256
Male, age 80, left hemisphere
182.4
2255
Female, age 91, right hemisphere
168.2
2516
Male, age 75, right hemisphere
166.3
2830
Female, age 67, right hemisphere
160.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
357.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 357.2
Samples: 152
Max nTPM: 762.5
Min nTPM: 190.1
Std nTPM: 86.2
Median nTPM: 340.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
762.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
646.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
580.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
572.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
560.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
559.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
549.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
531.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
516.3
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
512.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
511.6
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
510.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
500.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
492.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
482.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
481.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
472.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
469.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
469.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
456.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
443.3
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
437.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
433.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
428.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
424.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
419.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
409.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
409.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
408.9
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
404.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
399.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
396.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
395.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
394.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
391.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
387.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
387.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
386.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
385.7
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
385.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
384.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
383.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
382.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
381.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
377.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
376.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
376.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
375.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
375.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
371.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
371.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
369.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
368.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
367.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
367.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
364.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
363.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
363.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
363.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
361.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
359.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
357.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
357.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
356.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
354.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
354.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
353.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
352.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
351.6
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
351.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
347.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
347.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
346.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
344.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
341.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
340.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
340.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
339.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
336.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
336.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
335.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
334.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
333.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
331.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
329.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
328.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
326.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
325.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
325.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
325.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
325.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
324.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
323.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
322.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
322.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
320.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
319.6
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
316.9
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
316.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
315.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
314.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
312.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
311.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
310.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
310.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
309.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
308.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
307.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
307.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
306.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
306.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
303.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
302.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
300.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
299.7
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
299.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
295.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
294.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
294.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
293.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
293.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
291.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
289.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
288.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
288.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
286.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
285.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
284.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
284.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
284.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
281.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
280.3
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
278.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
273.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
271.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
268.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
268.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
267.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
265.6
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
265.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
264.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
263.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
260.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
260.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
254.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
253.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
253.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
251.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
225.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
225.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
225.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
190.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
200.5
Mouse sample
Sample description
nTPM
Amygdala nTPM: 200.5
Samples: 4
Max nTPM: 227.6
Min nTPM: 173.0
Sample A
Male
227.6
Sample B
Male
173.0
Sample C
Female
207.3
Sample D
Female
194.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.