HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:114.3 nTPM
HPA Brain:83.4 nTPM
GTEx:114.3 nTPM
FANTOM5:43.8 Scaled Tags Per Million
Pig:36.0 nTPM
Mouse:47.0 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB011626
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 83.4
Sample id Sample description nTPM
Hippocampus
nTPM: 81.6
2529 Female, age 94, left hemisphere 94.9
1898 Male, age 80, left hemisphere 82.5
2621 Female, age 67, right hemisphere 81.5
1911 Female, age 85, right hemisphere 79.2
2148 Female, age 91, left hemisphere 78.3
1855 Male, age 76, left hemisphere 73.5
Dentate gyrus
nTPM: 82.4
2530 Female, age 94, left hemisphere 137.6
2010 Male, age 76, both hemispheres 87.0
2531 Female, age 67, both hemispheres 82.9
2528 Male, age 74, both hemispheres 68.0
2246 Female, age 85, both hemispheres 62.5
1927 Female, age 91, both hemispheres 56.3
Entorhinal gyrus
nTPM: 83.4
2117 Female, age 91, right hemisphere 118.9
2686 Male, age 75, right hemisphere 103.0
2764 Male, age 80, right hemisphere 81.7
1787 Male, age 76, left hemisphere 67.1
2613 Female, age 94, left hemisphere 66.4
1938 Female, age 85, left hemisphere 63.1
Hippocampus, CA1
nTPM: 61.4
1873 Female, age 85, both hemispheres 66.2
2527 Male, age 74, both hemispheres 66.1
2082 Female, age 91, right hemisphere 64.6
2749 Male, age 80, left hemisphere 62.2
2045 Male, age 76, both hemispheres 48.0
Hippocampus, CA2
nTPM: 76.6
1963 Male, age 80, left hemisphere 113.8
2437 Female, age 94, left hemisphere 80.0
2113 Female, age 91, right hemisphere 72.1
2249 Male, age 74, both hemispheres 68.8
1940 Female, age 85, left hemisphere 67.2
1892 Male, age 76, both hemispheres 58.0
Hippocampus, CA3
nTPM: 62.2
2861 Female, age 67, both hemispheres 84.0
1891 Female, age 85, both hemispheres 74.4
1867 Male, age 76, both hemispheres 67.4
2137 Male, age 80, left hemisphere 52.5
2620 Female, age 94, left hemisphere 48.5
2436 Male, age 74, both hemispheres 46.2
Parahippocampal cortex
nTPM: 63.3
2622 Female, age 67, right hemisphere 75.8
2532 Female, age 72, left hemisphere 73.2
2245 Female, age 91, both hemispheres 71.7
1990 Female, age 91, right hemisphere 70.2
2692 Male, age 74, both hemispheres 69.5
2018 Male, age 76, both hemispheres 64.5
1933 Female, age 85, both hemispheres 59.2
2250 Female, age 67, right hemisphere 56.7
1850 Male, age 80, both hemispheres 51.3
2693 Female, age 94, both hemispheres 40.7
Perirhinal gyrus
nTPM: 48.4
1794 Male, age 80, right hemisphere 57.0
1847 Female, age 91, left hemisphere 50.4
1841 Female, age 85, right hemisphere 45.4
2848 Male, age 76, right hemisphere 45.0
2521 Female, age 94, right hemisphere 44.1
Subiculum
nTPM: 80.6
2042 Male, age 76, both hemispheres 94.3
1901 Male, age 80, both hemispheres 84.0
2729 Female, age 91, right hemisphere 84.0
1977 Female, age 85, both hemispheres 81.2
2438 Female, age 94, left hemisphere 73.2
2619 Male, age 74, both hemispheres 66.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 114.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 114.3
Samples: 197

Max nTPM: 436.8
Min nTPM: 27.5
Std nTPM: 56.7
Median nTPM: 101.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 436.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 299.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 290.6
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 280.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 274.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 260.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 260.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 256.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 248.5
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 225.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 220.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 43.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.8
FF:10153-102I9 76 years, female 58.5
FF:10169-103B7 60 years, female 29.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 36.0
Pig sample Sample description nTPM
Subiculum
nTPM: 25.4
Samples: 4

Max nTPM: 30.8
Min nTPM: 21.8
Sample A Female 30.8
Sample B Female 25.5
Sample C Male 21.8
Sample D Male 23.3
Dorsal hippocampus
nTPM: 36.0
Samples: 4

Max nTPM: 48.2
Min nTPM: 18.7
Sample A Female 48.2
Sample B Female 34.1
Sample C Male 42.9
Sample D Male 18.7
Entorhinal cortex
nTPM: 23.6
Samples: 4

Max nTPM: 27.2
Min nTPM: 18.3
Sample A Female 21.8
Sample B Female 27.2
Sample C Male 27.2
Sample D Male 18.3
Ventral hippocampus
nTPM: 29.9
Samples: 4

Max nTPM: 36.9
Min nTPM: 22.4
Sample A Female 30.7
Sample B Female 22.4
Sample C Male 36.9
Sample D Male 29.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 47.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.0
Samples: 4

Max nTPM: 53.0
Min nTPM: 42.7
Sample A Male 53.0
Sample B Male 48.5
Sample C Female 43.8
Sample D Female 42.7
Hippocampal formation
nTPM: 46.9
Samples: 4

Max nTPM: 49.5
Min nTPM: 44.5
Sample A Male 46.3
Sample B Male 44.5
Sample C Female 49.5
Sample D Female 47.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
76081088 Antisense, RP_060608_04_A09, Mouse strain C57BL/6J (56 days, male) 1.3

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