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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
113.5
nTPM
HPA Brain:
139.3
nTPM
GTEx:
113.5
nTPM
FANTOM5:
58.0
Scaled Tags Per Million
Pig:
26.7
nTPM
Mouse:
52.1
nTPM
Allen mouse:
1.5
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
139.3
Sample id
Sample description
nTPM
Amygdala nTPM: 97.6
2695
Female, age 67, right hemisphere
128.5
2517
Female, age 94, left hemisphere
92.9
1987
Female, age 91, left hemisphere
91.7
2814
Male, age 76, right hemisphere
91.4
2514
Male, age 75, right hemisphere
83.7
Basal amygdala nTPM: 99.4
2827
Female, age 67, right hemisphere
188.7
2609
Male, age 75, right hemisphere
105.0
2110
Male, age 80, left hemisphere
84.8
2685
Female, age 94, left hemisphere
81.3
1955
Male, age 76, both hemispheres
69.6
2243
Female, age 91, right hemisphere
66.6
Central amygdala nTPM: 121.6
2826
Female, age 94, left hemisphere
241.8
2515
Male, age 75, right hemisphere
130.0
1905
Male, age 76, both hemispheres
89.1
2239
Male, age 80, left hemisphere
81.0
2701
Female, age 91, right hemisphere
66.0
Corticomedial amygdala nTPM: 75.7
2535
Female, age 67, right hemisphere
118.2
2428
Male, age 75, right hemisphere
95.7
2829
Male, age 80, left hemisphere
72.0
2242
Female, age 91, right hemisphere
61.9
2429
Female, age 94, left hemisphere
54.2
2240
Male, age 76, both hemispheres
51.9
Lateral amygdala nTPM: 139.3
2830
Female, age 67, right hemisphere
265.5
2534
Female, age 94, left hemisphere
142.1
2516
Male, age 75, right hemisphere
141.4
2256
Male, age 80, left hemisphere
118.9
2255
Female, age 91, right hemisphere
85.2
1883
Male, age 76, both hemispheres
83.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
113.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 113.5
Samples: 152
Max nTPM: 283.2
Min nTPM: 20.9
Std nTPM: 56.6
Median nTPM: 98.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
283.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
270.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
270.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
265.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
255.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
253.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
251.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
244.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
238.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
231.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
228.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
223.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
208.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
208.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
208.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
204.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
193.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
190.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
189.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
185.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
182.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
177.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
175.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
173.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
170.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
169.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
167.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
158.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
157.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
152.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
151.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
150.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
148.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
148.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
147.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
145.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
144.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
141.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
138.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
132.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
131.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
131.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
131.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
130.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
129.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
128.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
127.4
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
127.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
123.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
121.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
120.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
120.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
118.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
118.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
116.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
115.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
112.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
109.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
109.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
107.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
107.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
107.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
107.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
106.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
105.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
105.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
104.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
104.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
104.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
102.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
102.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
101.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
101.1
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
99.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
98.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
98.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
97.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
96.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
96.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
95.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
95.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
93.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
93.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
92.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
92.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
92.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
91.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
90.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
90.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
90.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
89.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
87.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
87.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
85.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
85.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
84.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
83.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
82.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
82.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
82.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
79.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
77.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
76.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
75.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
74.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
74.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
74.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
73.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
72.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
71.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
71.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
71.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
69.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
69.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
69.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
68.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
68.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
68.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
68.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
67.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
67.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
66.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
64.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
64.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
64.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
64.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
63.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
63.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
63.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
63.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
62.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
62.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
62.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
62.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
61.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
61.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
60.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
59.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
58.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
57.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
56.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
54.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
53.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
53.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
52.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
49.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
49.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
48.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
47.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
47.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
44.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
20.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
52.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 52.1
Samples: 4
Max nTPM: 66.8
Min nTPM: 46.2
Sample A
Male
46.2
Sample B
Male
49.0
Sample C
Female
66.8
Sample D
Female
46.3
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.