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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1991.3
nTPM
HPA Brain:
2822.2
nTPM
GTEx:
1991.3
nTPM
FANTOM5:
1716.2
Scaled Tags Per Million
Pig:
1072.0
nTPM
Mouse:
812.5
nTPM
Allen mouse:
16.3
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
2822.2
Sample id
Sample description
nTPM
Amygdala nTPM: 2822.2
2814
Male, age 76, right hemisphere
3973.4
2695
Female, age 67, right hemisphere
3173.4
2514
Male, age 75, right hemisphere
3082.9
2517
Female, age 94, left hemisphere
2164.7
1987
Female, age 91, left hemisphere
1716.4
Basal amygdala nTPM: 1832.4
2110
Male, age 80, left hemisphere
2314.0
2827
Female, age 67, right hemisphere
2251.8
2685
Female, age 94, left hemisphere
1970.1
1955
Male, age 76, both hemispheres
1951.5
2609
Male, age 75, right hemisphere
1765.9
2243
Female, age 91, right hemisphere
741.1
Central amygdala nTPM: 2264.8
2826
Female, age 94, left hemisphere
2965.2
1905
Male, age 76, both hemispheres
2901.9
2239
Male, age 80, left hemisphere
2115.6
2515
Male, age 75, right hemisphere
1752.7
2701
Female, age 91, right hemisphere
1588.3
Corticomedial amygdala nTPM: 1252.7
2428
Male, age 75, right hemisphere
1817.1
2535
Female, age 67, right hemisphere
1429.9
2429
Female, age 94, left hemisphere
1406.7
2240
Male, age 76, both hemispheres
1403.0
2829
Male, age 80, left hemisphere
1001.6
2242
Female, age 91, right hemisphere
457.9
Lateral amygdala nTPM: 2624.9
1883
Male, age 76, both hemispheres
3194.0
2830
Female, age 67, right hemisphere
3150.8
2516
Male, age 75, right hemisphere
2996.2
2256
Male, age 80, left hemisphere
2558.7
2534
Female, age 94, left hemisphere
2459.3
2255
Female, age 91, right hemisphere
1390.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1991.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 1991.3
Samples: 152
Max nTPM: 8773.8
Min nTPM: 12.6
Std nTPM: 1266.2
Median nTPM: 1698.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
8773.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
6487.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
6475.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
5525.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
5356.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
4604.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
4378.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
4112.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
3924.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
3802.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
3615.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
3600.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
3548.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
3534.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
3432.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
3391.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
3388.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
3359.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
3350.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
3321.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
3313.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
3280.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
3231.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
3128.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
3041.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
2954.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
2896.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
2859.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
2779.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
2773.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
2742.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
2705.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
2683.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
2656.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
2633.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
2632.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
2627.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
2601.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
2573.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
2557.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
2535.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
2453.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
2442.0
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
2428.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
2391.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
2377.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
2340.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
2323.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
2303.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
2282.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
2280.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
2268.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
2218.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
2190.3
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
2188.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
2174.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
2152.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
2142.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
2108.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
2070.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
2026.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
1990.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
1946.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
1879.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
1878.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
1846.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
1825.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
1822.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
1790.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
1777.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
1759.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
1741.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
1723.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
1719.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
1715.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
1708.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
1687.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
1683.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
1678.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
1667.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
1609.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
1562.4
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
1546.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
1543.7
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
1540.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
1494.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
1474.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
1424.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
1416.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
1378.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
1377.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
1368.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
1354.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
1346.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
1326.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
1325.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
1323.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
1317.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
1316.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
1312.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
1305.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
1299.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
1293.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
1277.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
1271.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
1229.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
1223.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
1214.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
1191.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
1190.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
1166.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
1166.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
1153.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
1146.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
1145.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
1130.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
1125.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
1095.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
1029.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
1021.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
1016.1
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
994.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
987.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
965.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
944.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
939.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
938.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
918.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
914.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
910.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
890.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
859.2
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
853.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
839.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
831.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
824.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
818.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
807.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
806.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
804.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
776.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
773.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
768.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
715.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
654.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
602.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
561.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
481.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
464.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
391.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
380.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
12.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
812.5
Mouse sample
Sample description
nTPM
Amygdala nTPM: 812.6
Samples: 4
Max nTPM: 1347.2
Min nTPM: 596.9
Sample A
Male
635.4
Sample B
Male
596.9
Sample C
Female
1347.2
Sample D
Female
670.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.