HIPPOCAMPAL FORMATION - Expression summary
Mouse brain, Intensity
Hippocampal formationi 		80.891
Protein expressioni No data
RNA expressioni
Consensus:33.0 nTPM
HPA Brain:109.0 nTPM
GTEx:33.0 nTPM
FANTOM5:101.7 Scaled Tags Per Million
Pig:44.7 nTPM
Mouse:74.4 nTPM
Allen mouse:9.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA070407
Hippocampal formation mean intensity 80.891
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 80.891
Molecular layer of the dentate gyrus 18.816
Granular dentate gyrus 9.238
CA1 - oriens layer 12.473
CA1 - pyramidal layer 14.373
CA1 - radiatum layer 12.479
CA2 - oriens layer 21.952
CA2 - pyramidal layer 11.717
CA2 - radiatum layer 39.412
CA3 - oriens layer 31.954
CA3 - pyramidal layer 29.103
CA3 - radiatum layer 50.445
Stratum lucidum 67.565
Lacunosum moleculare 12.133
Subiculum 26.869

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 109.0
Sample id Sample description nTPM
Hippocampus
nTPM: 96.4
2529 Female, age 94, left hemisphere 111.2
1898 Male, age 80, left hemisphere 103.5
1911 Female, age 85, right hemisphere 98.2
2148 Female, age 91, left hemisphere 95.5
1855 Male, age 76, left hemisphere 90.9
2621 Female, age 67, right hemisphere 79.3
Dentate gyrus
nTPM: 109.0
2528 Male, age 74, both hemispheres 149.7
2010 Male, age 76, both hemispheres 134.2
2530 Female, age 94, left hemisphere 132.4
2246 Female, age 85, both hemispheres 107.7
2531 Female, age 67, both hemispheres 82.4
1927 Female, age 91, both hemispheres 47.8
Entorhinal gyrus
nTPM: 50.1
2117 Female, age 91, right hemisphere 74.3
1938 Female, age 85, left hemisphere 51.8
2764 Male, age 80, right hemisphere 50.9
2686 Male, age 75, right hemisphere 46.4
1787 Male, age 76, left hemisphere 41.2
2613 Female, age 94, left hemisphere 35.9
Hippocampus, CA1
nTPM: 90.6
2527 Male, age 74, both hemispheres 112.1
2082 Female, age 91, right hemisphere 110.6
1873 Female, age 85, both hemispheres 99.5
2045 Male, age 76, both hemispheres 84.2
2749 Male, age 80, left hemisphere 46.6
Hippocampus, CA2
nTPM: 79.6
2249 Male, age 74, both hemispheres 132.0
1963 Male, age 80, left hemisphere 104.7
2437 Female, age 94, left hemisphere 72.0
2113 Female, age 91, right hemisphere 67.2
1940 Female, age 85, left hemisphere 63.5
1892 Male, age 76, both hemispheres 38.2
Hippocampus, CA3
nTPM: 77.4
2436 Male, age 74, both hemispheres 107.5
2620 Female, age 94, left hemisphere 91.8
1891 Female, age 85, both hemispheres 83.8
2861 Female, age 67, both hemispheres 73.4
1867 Male, age 76, both hemispheres 57.8
2137 Male, age 80, left hemisphere 50.2
Parahippocampal cortex
nTPM: 46.9
2018 Male, age 76, both hemispheres 66.7
1933 Female, age 85, both hemispheres 58.4
2532 Female, age 72, left hemisphere 57.3
2245 Female, age 91, both hemispheres 52.3
2250 Female, age 67, right hemisphere 44.2
2692 Male, age 74, both hemispheres 44.2
1990 Female, age 91, right hemisphere 41.9
1850 Male, age 80, both hemispheres 41.0
2622 Female, age 67, right hemisphere 32.6
2693 Female, age 94, both hemispheres 31.0
Perirhinal gyrus
nTPM: 41.7
2521 Female, age 94, right hemisphere 55.1
1841 Female, age 85, right hemisphere 43.5
2848 Male, age 76, right hemisphere 37.7
1794 Male, age 80, right hemisphere 36.5
1847 Female, age 91, left hemisphere 35.6
Subiculum
nTPM: 69.0
2729 Female, age 91, right hemisphere 99.9
2042 Male, age 76, both hemispheres 92.1
1977 Female, age 85, both hemispheres 69.0
1901 Male, age 80, both hemispheres 58.5
2619 Male, age 74, both hemispheres 51.1
2438 Female, age 94, left hemisphere 43.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 33.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.0
Samples: 197

Max nTPM: 123.5
Min nTPM: 5.1
Std nTPM: 17.6
Median nTPM: 28.7
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 123.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 84.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 84.3
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 82.5
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 80.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 80.3
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 79.1
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 71.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 70.4
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 69.1
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 68.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 101.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 101.7
FF:10153-102I9 76 years, female 122.4
FF:10169-103B7 60 years, female 81.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 44.7
Pig sample Sample description nTPM
Subiculum
nTPM: 18.2
Samples: 4

Max nTPM: 25.4
Min nTPM: 12.1
Sample A Female 19.0
Sample B Female 12.1
Sample C Male 16.4
Sample D Male 25.4
Dorsal hippocampus
nTPM: 44.7
Samples: 4

Max nTPM: 67.3
Min nTPM: 26.7
Sample A Female 67.3
Sample B Female 47.4
Sample C Male 26.7
Sample D Male 37.3
Entorhinal cortex
nTPM: 20.3
Samples: 4

Max nTPM: 30.1
Min nTPM: 10.8
Sample A Female 30.1
Sample B Female 18.8
Sample C Male 21.5
Sample D Male 10.8
Ventral hippocampus
nTPM: 34.7
Samples: 4

Max nTPM: 44.2
Min nTPM: 21.1
Sample A Female 37.1
Sample B Female 21.1
Sample C Male 44.2
Sample D Male 36.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 74.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 74.4
Samples: 4

Max nTPM: 82.2
Min nTPM: 66.1
Sample A Male 76.3
Sample B Male 66.1
Sample C Female 73.0
Sample D Female 82.2
Hippocampal formation
nTPM: 57.9
Samples: 4

Max nTPM: 60.4
Min nTPM: 53.6
Sample A Male 53.6
Sample B Male 58.5
Sample C Female 60.4
Sample D Female 59.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 9.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.2
73592530 Antisense, RP_051017_01_E06, Mouse strain C57BL/6J (56 days, male) 10.5
69549643 Antisense, RP_050310_01_D05, Mouse strain C57BL/6J (56 days, male) 7.8

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