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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
102.2
nTPM
GTEx:
102.2
nTPM
FANTOM5:
2479.6
Scaled Tags Per Million
Pig:
39.2
nTPM
Mouse:
30.0
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
102.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 102.2
Samples: 105
Max nTPM: 824.4
Min nTPM: 6.8
Std nTPM: 133.2
Median nTPM:
308_1
70 years, female
824.4
218_1
71 years, female
623.1
173_1
67 years, male
527.2
495_1
57 years, female
420.1
41_1
94 years, female
401.7
307_1
66 years, female
350.7
317_1
60 years, male
324.2
384_1
83 years, male
306.4
295_1
61 years, female
278.0
386_1
76 years, male
250.4
139_1
64 years, female
249.3
145_1
84 years, male
246.1
379_1
60 years, male
239.0
314_1
67 years, male
224.1
42_1
85 years, male
200.1
35_1
74 years, female
197.5
452_1
88 years, female
186.0
316_1
62 years, male
182.6
322_1
76 years, male
168.7
137_1
83 years, male
164.3
347_1
72 years, male
160.3
375_1
74 years, female
155.9
237_1
82 years, male
155.2
351_1
91 years, male
153.7
43_1
64 years, female
140.8
4_1
88 years, female
135.4
17_1
71 years, male
133.8
447_1
81 years, male
130.5
315_1
62 years, female
121.0
6_1
73 years, female
118.3
348_1
84 years, male
110.9
321_1
62 years, female
109.1
350_1
84 years, female
104.7
353_1
82 years, female
94.9
491_1
89 years, female
92.2
120_1
70 years, female
91.2
2_1
77 years, female
90.6
354_1
81 years, female
89.5
490_1
67 years, female
87.5
291_1
76 years, male
87.1
119_1
70 years, female
86.6
89_1
63 years, male
82.9
311_1
78 years, male
78.3
518_1
75 years, female
77.9
117_1
61 years, male
75.6
501_1
88 years, male
75.3
349_1
83 years, male
72.7
318_1
68 years, male
65.8
506_1
65 years, male
64.8
396_1
62 years, male
53.8
389_1
86 years, female
51.7
288_1
66 years, female
50.6
313_1
79 years, female
42.2
319_1
81 years, male
41.8
293_1
68 years, female
39.3
264_1
73 years, female
38.9
109_1
81 years, female
38.4
377_1
82 years, female
35.5
526_1
61 years, male
34.9
265_1
87 years, male
34.8
18_1
88 years, male
32.2
163_1
78 years, male
31.3
320_1
89 years, female
30.8
243_1
75 years, male
30.3
356_1
87 years, female
29.5
503_1
68 years, male
29.3
162_1
79 years, female
28.6
335_1
73 years, female
28.2
189_1
76 years, male
27.7
405_1
91 years, male
26.3
177_1
74 years, male
25.0
324_1
76 years, male
23.1
413_1
59 years, female
23.1
355_1
70 years, female
22.8
266_1
85 years, male
22.2
172_1
72 years, female
21.2
246_1
77 years, male
21.0
142_1
61 years, female
20.9
286_1
68 years, female
20.9
81_1
67 years, male
20.3
99_1
64 years, male
18.5
376_1
75 years, female
18.5
517_1
88 years, male
18.0
414_1
84 years, female
17.9
499_1
55 years, female
17.7
126_1
63 years, male
17.0
254_1
77 years, female
16.8
352_1
62 years, male
16.2
468_1
89 years, male
15.4
149_1
88 years, male
14.6
217_1
76 years, male
14.6
415_1
77 years, female
14.5
425_1
59 years, female
14.5
292_1
71 years, male
14.3
404_1
82 years, female
14.2
480_1
63 years, male
14.1
115_1
83 years, male
13.6
394_1
75 years, female
12.3
32_1
67 years, male
12.1
153_1
70 years, female
11.1
251_1
78 years, male
10.2
466_1
57 years, female
9.8
406_1
79 years, male
9.1
229_1
69 years, female
8.2
9_1
66 years, female
6.8
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.