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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FN1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
181.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
7888.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
297.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
203.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
140.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
139.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
133.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
131.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
127.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
116.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
111.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
106.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
99.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
97.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
93.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
80.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
79.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
77.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
71.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
70.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
70.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
69.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
67.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
66.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
65.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
63.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
62.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
61.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
61.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
60.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
58.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
56.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
53.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
51.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
50.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
46.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
43.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
39.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
39.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
39.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
36.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
31.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
29.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
29.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
28.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
27.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
25.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
23.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
22.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
21.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
20.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
19.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
19.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
18.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
16.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
15.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
14.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
12.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
10.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
8.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
7.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
6.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
6.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
2.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FN1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
381.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
2937.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
2804.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
2714.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
2122.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
2005.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
1912.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
1833.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
1793.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
1768.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
1765.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
1726.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
1679.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
1620.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
1605.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
1591.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
1572.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
1569.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
1546.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
1534.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
1466.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
1464.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
1348.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
1299.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
1229.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
1216.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
1199.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
1133.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
1102.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
1100.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
1082.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
1075.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
1025.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
1024.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
930.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
923.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
919.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
886.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
875.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
868.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
866.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
862.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
856.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
851.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
847.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
846.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
832.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
807.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
803.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
798.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
795.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
789.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
788.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
786.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
783.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
769.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
756.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
747.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
746.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
725.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
716.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
716.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
708.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
705.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
704.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
693.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
692.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
690.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
688.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
674.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
665.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
658.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
656.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
654.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
649.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
647.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
641.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
639.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
633.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
629.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
628.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
626.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
622.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
618.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
617.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
615.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
611.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
611.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
610.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
595.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
586.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
585.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
581.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
580.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
579.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
577.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
572.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
570.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
565.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
564.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
561.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
560.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
559.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
555.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
554.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
552.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
548.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
547.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
546.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
544.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
537.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
535.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
534.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
528.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
527.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
518.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
509.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
502.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
497.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
496.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
492.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
492.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
491.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
487.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
485.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
481.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
480.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
476.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
468.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
468.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
466.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
466.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
461.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
461.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
459.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
458.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
457.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
454.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
454.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
453.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
450.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
449.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
446.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
443.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
441.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
436.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
436.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
435.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
428.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
425.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
423.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
421.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
416.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
413.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
413.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
413.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
411.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
409.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
407.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
404.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
403.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
400.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
400.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
399.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
397.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
387.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
385.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
385.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
384.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
382.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
381.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
380.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
373.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
371.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
370.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
370.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
367.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
366.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
365.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
363.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
360.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
358.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
358.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
358.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
357.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
355.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
354.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
353.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
353.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
351.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
351.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
349.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
348.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
347.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
346.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
342.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
342.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
341.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
336.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
335.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
334.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
333.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
332.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
332.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
330.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
329.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
328.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
328.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
327.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
327.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
325.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
325.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
323.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
322.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
320.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
319.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
319.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
319.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
319.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
316.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
315.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
314.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
314.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
314.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
313.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
313.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
312.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
312.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
311.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
310.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
307.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
305.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
305.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
304.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
304.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
302.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
300.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
300.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
299.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
299.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
296.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
294.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
294.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
294.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
293.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
293.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
290.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
287.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
287.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
284.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
283.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
280.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
280.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
280.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
279.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
279.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
278.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
277.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
276.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
275.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
273.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
271.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
271.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
269.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
268.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
268.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
267.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
267.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
266.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
265.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
264.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
264.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
262.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
262.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
261.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
261.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
260.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
260.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
260.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
255.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
252.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
251.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
248.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
246.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
243.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
240.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
239.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
237.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
237.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
237.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
237.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
233.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
233.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
233.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
230.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
230.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
229.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
229.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
229.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
226.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
225.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
224.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
221.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
220.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
219.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
218.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
217.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
217.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
215.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
215.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
214.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
214.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
213.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
212.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
210.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
210.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
209.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
209.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
207.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
206.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
206.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
205.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
204.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
203.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
201.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
201.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
200.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
199.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
198.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
198.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
197.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
195.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
195.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
191.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
190.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
190.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
190.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
190.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
189.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
188.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
188.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
187.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
184.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
184.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
183.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
182.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
182.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
181.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
181.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
180.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
179.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
177.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
177.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
176.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
174.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
173.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
173.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
171.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
171.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
171.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
171.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
171.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
170.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
170.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
170.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
167.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
165.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
163.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
163.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
163.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
162.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
162.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
160.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
160.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
160.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
159.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
158.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
155.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
153.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
152.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
152.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
152.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
150.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
150.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
147.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
146.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
145.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
145.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
144.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
143.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
143.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
143.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
143.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
142.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
139.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
139.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
139.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
136.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
135.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
135.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
131.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
129.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
128.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
128.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
128.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
128.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
126.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
126.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
125.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
125.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
122.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
121.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
120.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
118.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
116.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
116.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
116.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
114.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
114.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
113.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
112.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
112.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
111.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
111.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
110.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
110.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
109.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
107.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
107.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
106.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
105.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
103.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
103.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
101.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
101.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
101.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
101.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
100.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
99.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
99.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
99.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
97.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
95.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
94.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
94.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
93.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
93.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
92.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
91.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
90.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
88.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
88.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
88.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
87.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
87.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
86.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
83.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
82.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
82.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
81.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
81.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
80.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
76.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
76.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
76.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
76.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
76.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
75.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
75.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
72.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
72.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
69.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
68.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
68.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
68.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
68.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
67.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
65.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
63.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
63.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
62.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
59.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
55.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
55.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
53.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
53.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
49.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
49.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
47.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
47.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
43.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
43.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
42.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
41.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
40.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
38.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
37.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
36.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
36.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
34.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
31.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
31.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
30.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
29.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
28.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
27.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
26.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
23.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
23.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
23.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
21.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
21.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
19.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
19.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
15.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
14.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
6.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
3.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FN1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
379.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
6845.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
2745.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
2068.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
1306.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
1242.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
1036.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
965.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
927.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
909.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
896.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
845.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
833.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
795.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
739.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
592.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
565.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
448.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
429.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
394.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
365.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
364.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
362.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
357.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
351.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
349.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
331.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
329.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
304.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
288.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
286.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
279.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
263.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
259.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
248.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
241.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
241.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
235.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
235.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
228.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
228.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
227.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
212.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
204.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
204.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
203.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
199.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
185.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
179.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
179.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
178.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
175.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
174.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
171.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
162.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
155.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
153.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
149.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
147.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
146.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
139.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
138.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
136.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
133.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
133.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
128.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
125.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
123.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
122.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
122.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
115.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
114.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
107.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
107.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
105.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
100.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
98.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
97.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
95.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
95.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
93.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
92.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
87.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
87.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
85.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
85.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
85.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
83.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
80.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
77.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
77.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
70.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
63.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
61.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
60.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
56.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
55.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
40.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
36.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
35.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FN1 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
172.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
7061.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
4792.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
4283.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
3069.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
1928.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
1490.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
910.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
834.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
818.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
791.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
749.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
620.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
563.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
532.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
500.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
487.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
429.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
426.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
414.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
409.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
386.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
361.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
356.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
355.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
353.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
349.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
348.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
346.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
309.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
304.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
296.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
295.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
290.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
280.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
276.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
269.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
248.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
239.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
234.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
231.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
229.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
220.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
219.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
213.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
199.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
193.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
192.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
191.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
187.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
179.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
177.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
170.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
164.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
150.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
149.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
144.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
139.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
138.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
133.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
130.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
125.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
119.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
119.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
111.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
107.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
106.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
103.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
102.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
101.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
99.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
96.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
95.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
95.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
92.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
92.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
90.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
87.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
86.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
86.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
86.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
84.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
84.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
80.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
80.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
78.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
74.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
74.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
74.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
74.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
73.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
72.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
72.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
71.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
71.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
68.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
68.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
67.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
66.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
63.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
61.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
61.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
59.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
58.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
57.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
57.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
56.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
55.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
54.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
54.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
54.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
53.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
52.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
51.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
51.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
50.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
50.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
48.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
48.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
47.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
45.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
45.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
44.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
43.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
43.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
43.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
42.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
42.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
41.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
41.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
40.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
40.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
40.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
40.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
40.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
39.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
39.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
39.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
39.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
39.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
38.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
38.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
38.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
37.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
37.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
36.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
36.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
36.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
36.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
35.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
35.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
35.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
34.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
33.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
32.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
32.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
32.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
31.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
31.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
31.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
31.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
30.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
30.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
30.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
30.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
30.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
29.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
29.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
28.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
27.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
27.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
27.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
26.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
26.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
26.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
26.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
25.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
25.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
25.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
24.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
24.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
24.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
24.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
22.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
22.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
22.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
22.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
22.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
22.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
22.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
21.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
21.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
20.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
20.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
20.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
20.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
19.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
18.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
18.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
17.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
17.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
17.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
17.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
17.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
17.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
16.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
16.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
16.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
16.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
16.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
16.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
15.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
15.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
15.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
15.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
14.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
14.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
14.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
14.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
14.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
14.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
14.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
14.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
13.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
13.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
13.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
13.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
13.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
13.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
13.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
13.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
12.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
12.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
12.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
12.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
12.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
12.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
11.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
11.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
11.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
11.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
10.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
10.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
9.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
9.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
8.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
8.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
8.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
8.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
7.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
7.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
7.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
7.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
6.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
6.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
5.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
5.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
5.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
5.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
4.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
4.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
4.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
3.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
3.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
3.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
3.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
2.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
2.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
1.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
1.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
1.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012180003
Tumor
2.7
CPT0084560003
Tumor
2.5
CPT0017850003
Tumor
1.9
CPT0023350003
Tumor
1.5
CPT0076330003
Tumor
1.5
CPT0085670003
Tumor
1.4
CPT0015910003
Tumor
1.4
CPT0011240003
Tumor
1.4
CPT0075130003
Tumor
1.2
CPT0063630003
Tumor
1.0
CPT0092730003
Tumor
0.9
CPT0069160003
Tumor
0.9
CPT0066480003
Tumor
0.9
CPT0001260009
Tumor
0.9
CPT0007860003
Tumor
0.9
CPT0075560003
Tumor
0.8
CPT0088690003
Tumor
0.8
CPT0014160003
Tumor
0.7
CPT0088760003
Tumor
0.7
CPT0088630003
Tumor
0.7
CPT0081600003
Tumor
0.7
CPT0014370004
Tumor
0.6
CPT0092790003
Tumor
0.6
CPT0025880003
Tumor
0.6
CPT0006900003
Tumor
0.6
CPT0077310003
Tumor
0.6
CPT0012670003
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0025290003
Tumor
0.5
CPT0063320003
Tumor
0.5
CPT0081990003
Tumor
0.5
CPT0078510003
Tumor
0.5
CPT0065690003
Tumor
0.4
CPT0025230003
Tumor
0.4
CPT0079230003
Tumor
0.4
CPT0069000003
Tumor
0.4
CPT0002350011
Tumor
0.4
CPT0092290003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0065750003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0019130003
Tumor
0.3
CPT0075720003
Tumor
0.3
CPT0000640003
Tumor
0.3
CPT0088900003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0079380003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0088550004
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0012080003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0025110003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0000780007
Tumor
-0.1
CPT0012900004
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0007320003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0012370003
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0012550003
Tumor
-0.2
CPT0001180009
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0089460004
Tumor
-0.2
CPT0006630003
Tumor
-0.2
CPT0077320001
Normal
-0.2
CPT0084590001
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0089480003
Normal
-0.3
CPT0020020001
Normal
-0.3
CPT0018250001
Normal
-0.3
CPT0001550001
Normal
-0.3
CPT0012090003
Normal
-0.3
CPT0009060003
Tumor
-0.3
CPT0092160003
Tumor
-0.3
CPT0012570003
Normal
-0.4
CPT0069010001
Normal
-0.4
CPT0087050003
Normal
-0.4
CPT0011410003
Tumor
-0.4
CPT0025920001
Normal
-0.4
CPT0019160001
Normal
-0.4
CPT0015730003
Tumor
-0.4
CPT0077110003
Tumor
-0.4
CPT0071150004
Tumor
-0.5
CPT0007470001
Normal
-0.5
CPT0002370001
Normal
-0.5
CPT0014350001
Normal
-0.5
CPT0086890003
Normal
-0.5
CPT0086830003
Normal
-0.5
CPT0066520001
Normal
-0.5
CPT0086970003
Normal
-0.5
CPT0086360003
Tumor
-0.5
CPT0014470001
Normal
-0.5
CPT0078840001
Normal
-0.5
CPT0020130001
Normal
-0.5
CPT0078830003
Tumor
-0.5
CPT0079480003
Tumor
-0.5
CPT0006950001
Normal
-0.5
CPT0001510001
Normal
-0.5
CPT0064400001
Normal
-0.6
CPT0013790003
Normal
-0.6
CPT0077140001
Normal
-0.6
CPT0012920003
Normal
-0.6
CPT0081620001
Normal
-0.6
CPT0012640003
Normal
-0.6
CPT0000890001
Normal
-0.6
CPT0025060001
Normal
-0.6
CPT0007870001
Normal
-0.6
CPT0088780001
Normal
-0.6
CPT0001340003
Tumor
-0.6
CPT0063640001
Normal
-0.6
CPT0075570001
Normal
-0.6
CPT0001190001
Normal
-0.6
CPT0006730001
Normal
-0.6
CPT0001500009
Tumor
-0.7
CPT0024680001
Normal
-0.7
CPT0092740003
Normal
-0.7
CPT0082010001
Normal
-0.7
CPT0078660003
Tumor
-0.7
CPT0063330001
Normal
-0.7
CPT0006440003
Tumor
-0.7
CPT0026410003
Tumor
-0.7
CPT0010170001
Normal
-0.7
CPT0078940001
Normal
-0.7
CPT0078530001
Normal
-0.7
CPT0009020003
Normal
-0.7
CPT0089040001
Normal
-0.7
CPT0086370003
Normal
-0.7
CPT0088640003
Normal
-0.8
CPT0078990003
Tumor
-0.8
CPT0065820001
Normal
-0.8
CPT0009000003
Tumor
-0.8
CPT0014130001
Normal
-0.8
CPT0009080003
Normal
-0.8
CPT0001350001
Normal
-0.8
CPT0078670001
Normal
-0.8
CPT0012770003
Normal
-0.8
CPT0023360001
Normal
-0.8
CPT0000660001
Normal
-0.8
CPT0025610001
Normal
-0.8
CPT0088920001
Normal
-0.8
CPT0017450001
Normal
-0.8
CPT0079270003
Tumor
-0.8
CPT0079430001
Normal
-0.9
CPT0092310003
Normal
-0.9
CPT0077500001
Normal
-0.9
CPT0023710001
Normal
-0.9
CPT0079000001
Normal
-0.9
CPT0002270011
Tumor
-0.9
CPT0001540009
Tumor
-0.9
CPT0069190001
Normal
-0.9
CPT0006530001
Normal
-0.9
CPT0088570001
Normal
-0.9
CPT0088710001
Normal
-0.9
CPT0001230001
Normal
-0.9
CPT0025050003
Tumor
-1.0
CPT0026420001
Normal
-1.0
CPT0000790001
Normal
-1.0
CPT0065810003
Tumor
-1.0
CPT0088500001
Normal
-1.0
CPT0066430001
Normal
-1.0
CPT0092800003
Normal
-1.0
CPT0065450001
Normal
-1.1
CPT0024670003
Tumor
-1.1
CPT0079180003
Tumor
-1.2
CPT0086950003
Tumor
-1.3
CPT0078800003
Tumor
-1.5
CPT0088970003
Tumor
-1.5
CPT0014450004
Tumor
-1.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
