Expression of FN1 in head and neck cancer

HEAD AND NECK SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

FN1 is not prognostic in Head and Neck Squamous Cell Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 431.24

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

464.6

Number of samples

492

Samples

Sample	Description	TPM
TCGA-UF-A7JV-01A	0 years, female, white, stage:Stage IVA, dead, 90 days	11402.8
TCGA-UF-A7JD-01A	0 years, male, stage:Stage IVA, dead, 739 days	8900.4
TCGA-HD-7831-01A	0 years, male, white, stage:Stage IVA, alive, 667 days	8517.0
TCGA-P3-A5QA-01A	0 years, male, stage:Stage I, alive, 2182 days	7009.9
TCGA-CQ-6221-01A	0 years, male, white, stage:'--, alive, 1000 days	4945.8
TCGA-CV-6950-01A	0 years, male, white, stage:Stage IVA, dead, 459 days	4945.3
TCGA-CR-7382-01A	0 years, male, white, stage:Stage IVA, alive, 796 days	4650.9
TCGA-IQ-A61O-01A	0 years, male, white, stage:Stage IVA, dead, 421 days	4432.2
TCGA-CQ-5330-01A	0 years, female, white, stage:Stage IVA, alive, 1897 days	3776.1
TCGA-CQ-A4C7-01A	0 years, male, white, stage:Stage III, dead, 353 days	3162.4
TCGA-CV-6934-01A	0 years, female, white, stage:Stage IVA, dead, 65 days	3117.4
TCGA-DQ-5631-01A	0 years, male, white, stage:'--, dead, 548 days	3059.6
TCGA-CQ-6224-01A	0 years, male, white, stage:Stage IVA, alive, 1721 days	2778.6
TCGA-BA-A6DG-01A	0 years, male, white, stage:'--, dead, 69 days	2406.1
TCGA-CR-7376-01A	0 years, male, white, stage:Stage III, alive, 972 days	2231.3
TCGA-CV-A6JD-01A	0 years, female, white, stage:'--, dead, 182 days	2133.3
TCGA-CQ-7072-01A	0 years, male, white, stage:Stage II, alive, 2359 days	2065.8
TCGA-CR-7397-01A	0 years, male, white, stage:Stage IVA, alive, 754 days	2045.1
TCGA-CV-7429-01A	0 years, male, white, stage:Stage IVA, dead, 107 days	2045.0
TCGA-CN-4728-01A	0 years, male, white, stage:Stage IVA, alive, 1724 days	2020.6
TCGA-BA-6873-01A	0 years, male, white, stage:Stage IVA, alive, 122 days	1956.6
TCGA-CN-6989-01A	0 years, male, white, stage:Stage IVA, dead, 980 days	1844.1
TCGA-CN-6016-01A	0 years, male, white, stage:Stage IVA, alive, 1443 days	1822.4
TCGA-CV-5444-01A	0 years, male, black or african american, stage:Stage IVA, alive, 2437 days	1727.6
TCGA-CR-7386-01A	0 years, male, white, stage:Stage IVA, alive, 1430 days	1697.2
TCGA-CN-4740-01A	0 years, female, white, stage:Stage IVA, dead, 839 days	1645.3
TCGA-CR-6474-01A	0 years, male, white, stage:Stage IVA, dead, 564 days	1620.4
TCGA-UF-A7J9-01A	0 years, male, white, stage:Stage IVA, alive, 1358 days	1607.3
TCGA-CV-7435-01A	0 years, female, white, stage:Stage IVA, dead, 4680 days	1606.6
TCGA-CV-7103-01A	0 years, male, white, stage:Stage IVA, dead, 1591 days	1583.1
TCGA-CQ-5329-01A	0 years, female, white, stage:Stage II, alive, 2143 days	1582.6
TCGA-CN-6019-01A	0 years, male, white, stage:Stage IVA, alive, 1038 days	1539.5
TCGA-CR-5247-01A	0 years, male, black or african american, stage:'--, alive, 358 days	1529.7
TCGA-QK-AA3K-01A	0 years, male, black or african american, stage:Stage IVA, alive, 253 days	1461.0
TCGA-CV-5978-01A	0 years, female, black or african american, stage:Stage IVB, dead, 215 days	1427.2
TCGA-CV-7433-01A	0 years, male, white, stage:Stage IVA, dead, 601 days	1416.8
TCGA-CN-5370-01A	0 years, male, white, stage:Stage III, dead, 259 days	1408.8
TCGA-CV-5434-01A	0 years, male, black or african american, stage:Stage IVA, dead, 3314 days	1340.1
TCGA-CR-7367-01A	0 years, male, white, stage:Stage IVA, alive, 1440 days	1307.8
TCGA-QK-A6IG-01A	0 years, male, white, stage:Stage III, dead, 222 days	1266.6
TCGA-CN-6022-01A	0 years, male, white, stage:Stage IVA, dead, 281 days	1239.3
TCGA-BA-A8YP-01A	0 years, male, black or african american, stage:Stage IVB, alive, 499 days	1226.3
TCGA-BB-A5HU-01A	0 years, male, white, stage:Stage IVA, alive, 782 days	1216.3
TCGA-BB-8596-01A	0 years, female, white, stage:Stage IVA, alive, 2161 days	1208.4
TCGA-CR-7365-01A	0 years, male, white, stage:Stage IVA, alive, 1191 days	1197.6
TCGA-CV-7102-01A	0 years, female, white, stage:Stage IVA, dead, 56 days	1175.2
TCGA-D6-6517-01A	0 years, male, white, stage:Stage III, alive, 292 days	1171.8
TCGA-CQ-5326-01A	0 years, male, white, stage:Stage IVA, dead, 89 days	1160.7
TCGA-HD-7754-01A	0 years, male, white, stage:Stage IVA, alive, 783 days	1141.4
TCGA-CV-5976-01A	0 years, male, white, stage:Stage IVA, alive, 1478 days	1140.0
TCGA-CV-7177-01A	0 years, female, white, stage:Stage II, dead, 663 days	1096.4
TCGA-CV-7097-01A	0 years, male, white, stage:Stage II, dead, 385 days	1093.0
TCGA-CV-7568-01A	0 years, female, white, stage:Stage IVA, dead, 927 days	1075.7
TCGA-CV-7416-01A	0 years, female, white, stage:Stage IVA, dead, 763 days	1037.7
TCGA-CN-4742-01A	0 years, female, white, stage:Stage IVA, dead, 397 days	1006.5
TCGA-BA-5557-01A	0 years, female, stage:Stage III, alive, 623 days	1003.0
TCGA-CV-5979-01A	0 years, male, white, stage:Stage IVA, alive, 1315 days	1002.1
TCGA-CN-5361-01A	0 years, male, white, stage:Stage IVA, dead, 2120 days	994.3
TCGA-CN-6018-01A	0 years, female, white, stage:Stage IVA, dead, 580 days	970.1
TCGA-CX-7219-01A	0 years, male, black or african american, stage:Stage IVA, alive, 1045 days	925.3
TCGA-CN-4737-01A	0 years, male, white, stage:Stage IVA, alive, 625 days	924.9
TCGA-CV-6943-01A	0 years, male, white, stage:Stage III, dead, 602 days	914.8
TCGA-CV-7406-01A	0 years, male, white, stage:Stage II, dead, 1748 days	913.0
TCGA-CV-6935-01A	0 years, male, white, stage:Stage IVA, dead, 295 days	896.7
TCGA-CQ-5333-01A	0 years, male, white, stage:Stage II, dead, 341 days	894.7
TCGA-CN-5355-01A	0 years, male, black or african american, stage:Stage IVA, alive, 1278 days	823.4
TCGA-CN-5359-01A	0 years, male, white, stage:Stage IVA, dead, 377 days	812.5
TCGA-IQ-7630-01A	0 years, male, white, stage:Stage II, alive, 485 days	808.7
TCGA-CV-7424-01A	0 years, male, asian, stage:Stage IVA, dead, 453 days	787.5
TCGA-CN-4731-01A	0 years, female, white, stage:Stage IVA, dead, 998 days	757.4
TCGA-CQ-5334-01A	0 years, male, white, stage:Stage IVA, dead, 129 days	753.1
TCGA-UF-A7JJ-01A	0 years, male, stage:Stage IVA, alive, 549 days	741.8
TCGA-P3-A6T8-01A	0 years, male, white, stage:Stage IVA, alive, 400 days	738.8
TCGA-CV-5435-01A	0 years, male, white, stage:Stage IVA, dead, 2319 days	735.7
TCGA-CV-6961-01A	0 years, male, white, stage:Stage II, dead, 76 days	728.1
TCGA-CV-6933-01A	0 years, male, white, stage:Stage III, dead, 2741 days	723.9
TCGA-CV-7104-01A	0 years, female, white, stage:Stage IVA, dead, 393 days	721.8
TCGA-D6-6515-01A	0 years, female, white, stage:Stage II, dead, 403 days	710.0
TCGA-CN-5358-01A	0 years, male, white, stage:Stage II, dead, 261 days	706.8
TCGA-CV-7178-01A	0 years, female, white, stage:Stage IVA, dead, 2166 days	701.2
TCGA-BA-4078-01A	0 years, male, white, stage:'--, dead, 276 days	698.5
TCGA-CR-7379-01A	0 years, female, white, stage:Stage IVA, alive, 1036 days	690.0
TCGA-CV-6941-01A	0 years, male, white, stage:Stage III, dead, 342 days	687.3
TCGA-CV-7235-01A	0 years, male, white, stage:Stage II, alive, 2347 days	686.5
TCGA-T3-A92M-01A	0 years, male, black or african american, stage:Stage IVA, alive, 417 days	683.3
TCGA-CN-6994-01A	0 years, male, white, stage:Stage IVA, alive, 1183 days	676.4
TCGA-HD-7753-01A	0 years, male, black or african american, stage:Stage I, alive, 866 days	674.4
TCGA-4P-AA8J-01A	0 years, male, black or african american, stage:Stage IVA, alive, 102 days	673.4
TCGA-UF-A71A-01A	0 years, male, white, stage:Stage IVA, dead, 86 days	662.3
TCGA-CR-7398-01A	0 years, female, white, stage:Stage II, alive, 156 days	653.1
TCGA-CR-7383-01A	0 years, female, white, stage:Stage I, dead, 521 days	651.1
TCGA-CR-7390-01A	0 years, male, white, stage:Stage IVA, alive, 1508 days	647.8
TCGA-CV-7421-01A	0 years, male, white, stage:Stage IVA, dead, 2 days	637.3
TCGA-RS-A6TO-01A	0 years, female, white, stage:Stage IVA, dead, 387 days	631.5
TCGA-CR-7377-01A	0 years, male, white, stage:Stage IVA, dead, 279 days	625.0
TCGA-CN-5363-01A	0 years, male, black or african american, stage:Stage IVB, dead, 253 days	623.9
TCGA-CQ-A4CG-01A	0 years, female, white, stage:Stage III, dead, 430 days	619.9
TCGA-CN-5373-01A	0 years, female, white, stage:Stage I, alive, 1584 days	614.9
TCGA-CV-7438-01A	0 years, female, white, stage:Stage I, dead, 194 days	610.7
TCGA-IQ-7631-01A	0 years, female, white, stage:Stage II, alive, 1172 days	600.9
TCGA-CV-7263-01A	0 years, male, black or african american, stage:Stage II, dead, 560 days	570.1
TCGA-CR-6488-01A	0 years, female, white, stage:Stage II, alive, 379 days	569.6
TCGA-F7-8298-01A	0 years, male, white, stage:Stage I, alive, 995 days	567.5
TCGA-CV-7090-01A	0 years, male, white, stage:Stage II, alive, 5252 days	556.8
TCGA-CN-A63V-01A	0 years, male, white, stage:Stage IVA, alive, 679 days	542.9
TCGA-CQ-A4CB-01A	0 years, male, stage:Stage III, alive, 893 days	537.7
TCGA-CR-7392-01A	0 years, female, white, stage:Stage IVA, alive, 1425 days	533.2
TCGA-BA-6871-01A	0 years, male, white, stage:'--, dead, 108 days	527.2
TCGA-CR-7401-01A	0 years, male, white, stage:Stage I, alive, 1077 days	519.8
TCGA-UF-A7JH-01A	0 years, male, black or african american, stage:Stage IVA, alive, 896 days	517.1
TCGA-H7-8501-01A	0 years, male, white, stage:Stage IVA, alive, 461 days	500.5
TCGA-CV-A6JZ-01A	0 years, male, white, stage:Stage II, alive, 714 days	493.6
TCGA-CN-6024-01A	0 years, male, white, stage:Stage IVA, dead, 337 days	492.8
TCGA-WA-A7H4-01A	0 years, male, white, stage:Stage II, alive, 443 days	492.4
TCGA-CV-5431-01A	0 years, male, white, stage:Stage IVA, dead, 522 days	487.8
TCGA-CN-5366-01A	0 years, male, white, stage:Stage IVA, dead, 360 days	477.9
TCGA-CV-7413-01A	0 years, female, white, stage:Stage II, dead, 294 days	473.0
TCGA-CQ-A4CH-01A	0 years, male, asian, stage:Stage II, dead, 379 days	467.7
TCGA-CX-7085-01A	0 years, female, white, stage:Stage I, alive, 321 days	460.9
TCGA-CN-4736-01A	0 years, female, white, stage:'--, dead, 395 days	455.0
TCGA-BA-5559-01A	0 years, male, white, stage:'--, dead, 2083 days	452.7
TCGA-CR-6493-01A	0 years, male, black or african american, stage:Stage IVA, dead, 282 days	448.6
TCGA-CV-7236-01A	0 years, female, white, stage:Stage IVA, dead, 144 days	433.9
TCGA-CV-7261-01A	0 years, male, white, stage:Stage IVA, alive, 1512 days	428.6
TCGA-CV-A45T-01A	0 years, female, white, stage:'--, dead, 4856 days	427.7
TCGA-CN-4723-01A	0 years, male, white, stage:Stage IVA, alive, 1699 days	425.0
TCGA-HD-8224-01A	0 years, male, white, stage:Stage IVA, dead, 446 days	424.1
TCGA-CR-6477-01A	0 years, female, white, stage:'--, alive, 514 days	420.5
TCGA-BA-4074-01A	0 years, male, white, stage:Stage IVA, dead, 462 days	419.7
TCGA-CV-7254-01A	0 years, male, white, stage:Stage II, dead, 1459 days	416.6
TCGA-CV-5971-01A	0 years, male, white, stage:Stage IVA, alive, 701 days	412.9
TCGA-CN-A49A-01A	0 years, male, white, stage:Stage IVB, dead, 526 days	408.2
TCGA-CR-6484-01A	0 years, female, asian, stage:Stage IVA, alive, 354 days	405.0
TCGA-CV-6962-01A	0 years, male, white, stage:Stage IVA, dead, 126 days	392.9
TCGA-HD-8314-01A	0 years, male, white, stage:Stage III, alive, 670 days	392.1
TCGA-H7-A76A-01A	0 years, male, white, stage:'--, alive, 637 days	391.0
TCGA-CV-7091-01A	0 years, male, white, stage:Stage I, alive, 3381 days	390.7
TCGA-D6-6824-01A	0 years, male, white, stage:Stage IVA, alive, 77 days	386.9
TCGA-CR-7380-01A	0 years, male, white, stage:Stage IVB, dead, 606 days	385.8
TCGA-H7-8502-01A	0 years, male, white, stage:Stage IVA, alive, 458 days	383.5
TCGA-D6-6826-01A	0 years, female, white, stage:Stage IVA, dead, 348 days	379.5
TCGA-IQ-A61J-01A	0 years, male, white, stage:Stage IVA, alive, 1021 days	375.2
TCGA-BA-6872-01A	0 years, male, white, stage:'--, dead, 384 days	374.9
TCGA-CN-6997-01A	0 years, male, white, stage:Stage IVA, dead, 988 days	366.9
TCGA-CR-5243-01A	0 years, male, white, stage:'--, alive, 2562 days	365.0
TCGA-CN-6020-01A	0 years, male, black or african american, stage:Stage III, dead, 205 days	362.1
TCGA-UF-A7JA-01A	0 years, female, white, stage:Stage IVA, alive, 2265 days	358.1
TCGA-DQ-5630-01A	0 years, male, white, stage:'--, alive, 1030 days	356.5
TCGA-CV-7252-01A	0 years, female, black or african american, stage:Stage IVA, dead, 151 days	355.5
TCGA-BA-5556-01A	0 years, female, white, stage:Stage II, alive, 725 days	351.6
TCGA-CV-6954-01A	0 years, male, black or african american, stage:Stage IVA, dead, 2002 days	334.7
TCGA-T2-A6X2-01A	0 years, male, white, stage:Stage III, alive, 987 days	332.0
TCGA-CQ-6227-01A	0 years, male, white, stage:Stage IVA, dead, 129 days	331.1
TCGA-CV-7414-01A	0 years, male, white, stage:Stage IVA, dead, 14 days	330.4
TCGA-CN-4735-01A	0 years, male, white, stage:Stage IVA, alive, 1737 days	328.3
TCGA-CV-7446-01A	0 years, male, white, stage:Stage IVA, dead, 1093 days	327.7
TCGA-DQ-7592-01A	0 years, male, american indian or alaska native, stage:'--, alive, 1143 days	317.1
TCGA-CQ-7063-01A	0 years, female, white, stage:Stage I, alive, 2133 days	314.3
TCGA-CV-7410-01A	0 years, male, white, stage:Stage III, dead, 6417 days	313.0
TCGA-BB-A6UO-01A	0 years, female, white, stage:Stage IVA, dead, 268 days	307.7
TCGA-D6-8569-01A	0 years, male, white, stage:Stage II, alive, 770 days	304.7
TCGA-D6-8568-01A	0 years, male, white, stage:Stage II, alive, 759 days	300.3
TCGA-CN-4726-01A	0 years, male, white, stage:Stage IVA, dead, 142 days	298.2
TCGA-CV-A464-01A	0 years, male, white, stage:Stage III, alive, 1722 days	294.2
TCGA-CV-7415-01A	0 years, male, white, stage:Stage IVA, dead, 695 days	293.4
TCGA-P3-A6T3-01A	0 years, male, white, stage:Stage IVA, dead, 577 days	291.6
TCGA-QK-A6VB-01A	0 years, male, white, stage:Stage IVA, alive, 641 days	290.4
TCGA-BB-4223-01A	0 years, male, white, stage:Stage IVA, alive, 3221 days	289.9
TCGA-P3-A5Q6-01A	0 years, male, white, stage:Stage IVA, dead, 480 days	289.8
TCGA-DQ-5624-01A	0 years, female, white, stage:'--, alive, 1778 days	287.9
TCGA-P3-A6T2-01A	0 years, male, white, stage:Stage IVA, alive, 2298 days	287.3
TCGA-F7-A61W-01A	0 years, male, asian, stage:Stage IVA, alive, 14 days	278.4
TCGA-CQ-6219-01A	0 years, female, white, stage:Stage IVA, dead, 479 days	276.5
TCGA-D6-A4Z9-01A	0 years, male, white, stage:Stage IVA, alive, 539 days	273.8
TCGA-CV-6939-01A	0 years, male, white, stage:Stage IVA, dead, 666 days	272.7
TCGA-UF-A7JT-01A	0 years, female, white, stage:Stage IVA, dead, 993 days	271.8
TCGA-CV-5970-01A	0 years, male, white, stage:Stage IVA, dead, 406 days	271.0
TCGA-CQ-A4CI-01A	0 years, male, white, stage:Stage III, alive, 950 days	269.8
TCGA-CR-6470-01A	0 years, male, white, stage:Stage II, alive, 1521 days	268.1
TCGA-BA-4075-01A	0 years, male, black or african american, stage:Stage III, dead, 283 days	266.5
TCGA-CQ-5324-01A	0 years, male, white, stage:Stage III, alive, 1593 days	258.6
TCGA-CV-7100-01A	0 years, male, white, stage:Stage III, dead, 274 days	258.4
TCGA-CN-4727-01A	0 years, male, white, stage:Stage IVA, alive, 1560 days	254.9
TCGA-CV-7247-01A	0 years, male, white, stage:Stage III, dead, 577 days	254.0
TCGA-CR-7370-01A	0 years, female, white, stage:'--, alive, 105 days	252.8
TCGA-D6-6825-01A	0 years, male, white, stage:Stage I, alive, 491 days	251.1
TCGA-BB-A5HY-01A	0 years, male, white, stage:Stage IVA, dead, 321 days	250.3
TCGA-CN-6010-01A	0 years, male, white, stage:Stage IVA, alive, 1523 days	248.5
TCGA-IQ-A61H-01A	0 years, male, white, stage:Stage II, alive, 1138 days	248.3
TCGA-HD-A633-01A	0 years, male, white, stage:Stage IVA, alive, 421 days	247.2
TCGA-CN-5356-01A	0 years, male, white, stage:Stage III, alive, 1409 days	244.7
TCGA-CQ-6228-01A	0 years, female, white, stage:Stage IVA, dead, 456 days	244.4
TCGA-CV-7422-01A	0 years, female, white, stage:Stage IVA, dead, 1037 days	239.1
TCGA-CR-6472-01A	0 years, male, white, stage:'--, alive, 1050 days	239.0
TCGA-CV-A45Y-01A	0 years, male, american indian or alaska native, stage:Stage IVA, dead, 2703 days	237.5
TCGA-CR-7393-01A	0 years, male, white, stage:Stage III, alive, 993 days	236.1
TCGA-P3-A6T0-01A	0 years, female, white, stage:Stage IVA, alive, 578 days	236.0
TCGA-CN-6992-01A	0 years, male, white, stage:Stage IVA, alive, 1066 days	234.8
TCGA-HD-A4C1-01A	0 years, female, black or african american, stage:Stage IVA, alive, 11 days	234.6
TCGA-CR-6482-01A	0 years, male, black or african american, stage:'--, alive, 345 days	230.3
TCGA-CQ-A4C9-01A	0 years, male, stage:Stage III, alive, 707 days	229.0
TCGA-CV-A460-01A	0 years, male, white, stage:'--, dead, 1838 days	228.4
TCGA-MZ-A5BI-01A	0 years, male, white, stage:'--, dead, 217 days	226.4
TCGA-CV-6940-01A	0 years, female, white, stage:Stage III, dead, 804 days	225.1
TCGA-CR-7395-01A	0 years, female, white, stage:Stage II, alive, 930 days	225.0
TCGA-CV-7248-01A	0 years, female, black or african american, stage:Stage IVA, dead, 521 days	223.3
TCGA-CQ-7071-01A	0 years, female, white, stage:Stage III, alive, 1311 days	216.3
TCGA-CQ-5332-01A	0 years, male, white, stage:Stage III, dead, 317 days	214.0
TCGA-CX-7082-01A	0 years, male, white, stage:Stage IVA, dead, 11 days	213.3
TCGA-IQ-A61E-01A	0 years, female, white, stage:Stage III, alive, 1147 days	210.4
TCGA-CN-5360-01A	0 years, male, white, stage:Stage IVA, alive, 2169 days	210.1
TCGA-DQ-5629-01A	0 years, male, white, stage:'--, dead, 941 days	208.4
TCGA-CQ-5325-01A	0 years, male, white, stage:Stage I, dead, 654 days	208.2
TCGA-CN-5369-01A	0 years, female, white, stage:Stage IVA, dead, 1 days	208.1
TCGA-CR-6478-01A	0 years, female, white, stage:'--, dead, 183 days	207.9
TCGA-DQ-5625-01A	0 years, female, white, stage:'--, dead, 1133 days	206.7
TCGA-CV-6959-01A	0 years, male, white, stage:Stage III, dead, 256 days	203.2
TCGA-CV-6952-01A	0 years, female, white, stage:Stage IVA, dead, 185 days	203.0
TCGA-CV-7255-01A	0 years, female, white, stage:Stage IVA, dead, 64 days	202.9
TCGA-CN-4722-01A	0 years, female, white, stage:Stage II, alive, 1483 days	202.6
TCGA-CR-7394-01A	0 years, male, white, stage:Stage IVA, alive, 1346 days	201.3
TCGA-CV-7245-01A	0 years, male, white, stage:Stage IVA, alive, 797 days	197.3
TCGA-BB-4228-01A	0 years, male, white, stage:Stage III, alive, 559 days	196.5
TCGA-CR-7372-01A	0 years, male, white, stage:Stage I, alive, 759 days	193.8
TCGA-CQ-7069-01A	0 years, female, white, stage:Stage II, alive, 1274 days	193.2
TCGA-CV-7423-01A	0 years, male, white, stage:Stage II, dead, 3059 days	193.1
TCGA-WA-A7GZ-01A	0 years, male, white, stage:'--, dead, 625 days	187.9
TCGA-P3-A6SX-01A	0 years, male, white, stage:Stage III, dead, 1430 days	186.2
TCGA-CR-6471-01A	0 years, male, white, stage:Stage IVA, dead, 1202 days	185.4
TCGA-CN-4734-01A	0 years, male, white, stage:Stage II, alive, 1690 days	185.3
TCGA-CR-7391-01A	0 years, female, white, stage:Stage I, alive, 913 days	182.8
TCGA-UF-A718-01A	0 years, male, white, stage:Stage IVA, alive, 1971 days	182.6
TCGA-UF-A7JO-01A	0 years, female, white, stage:Stage IVA, dead, 631 days	181.9
TCGA-CQ-6222-01A	0 years, male, white, stage:Stage IVA, alive, 2016 days	180.5
TCGA-HD-8635-01A	0 years, female, white, stage:Stage III, alive, 695 days	179.1
TCGA-CN-5364-01A	0 years, male, white, stage:Stage IVA, dead, 493 days	177.9
TCGA-CV-A45R-01A	0 years, male, white, stage:Stage III, alive, 5480 days	176.3
TCGA-MT-A67D-01A	0 years, male, white, stage:Stage II, alive, 56 days	175.4
TCGA-CQ-6218-01A	0 years, female, white, stage:Stage IVA, alive, 1253 days	174.6
TCGA-CN-6013-01A	0 years, male, white, stage:Stage IVA, dead, 727 days	174.1
TCGA-QK-A652-01A	0 years, male, white, stage:Stage III, alive, 645 days	174.0
TCGA-CR-5250-01A	0 years, male, white, stage:'--, alive, 799 days	173.1
TCGA-CV-7440-01A	0 years, male, white, stage:Stage II, dead, 675 days	170.5
TCGA-HD-7832-01A	0 years, male, white, stage:Stage IVA, alive, 836 days	170.1
TCGA-CQ-6229-01A	0 years, male, white, stage:Stage II, alive, 1179 days	169.1
TCGA-CN-5367-01A	0 years, female, white, stage:Stage IVA, dead, 352 days	167.9
TCGA-QK-A8ZB-01A	0 years, male, black or african american, stage:Stage IVA, alive, 542 days	166.0
TCGA-CN-6017-01A	0 years, male, white, stage:Stage IVA, dead, 853 days	165.7
TCGA-CR-7388-01A	0 years, female, white, stage:'--, dead, 823 days	165.2
TCGA-BA-A4IF-01A	0 years, male, white, stage:'--, alive, 895 days	164.1
TCGA-CV-6942-01A	0 years, female, white, stage:Stage II, alive, 4282 days	162.7
TCGA-CV-7101-01A	0 years, male, white, stage:Stage II, dead, 160 days	160.7
TCGA-T3-A92N-01A	0 years, male, black or african american, stage:Stage IVA, dead, 95 days	160.6
TCGA-CV-A468-01A	0 years, male, stage:Stage IVA, dead, 464 days	159.9
TCGA-CV-7411-01A	0 years, female, white, stage:Stage IVA, dead, 2717 days	159.4
TCGA-UP-A6WW-01A	0 years, male, white, stage:'--, alive, 518 days	157.5
TCGA-CV-5441-01A	0 years, male, white, stage:Stage IVA, alive, 2886 days	157.5
TCGA-CV-5430-01A	0 years, male, white, stage:Stage IVA, alive, 4241 days	157.3
TCGA-CV-6960-01A	0 years, male, black or african american, stage:Stage III, dead, 862 days	156.5
TCGA-H7-A6C4-01A	0 years, female, white, stage:Stage IVA, dead, 414 days	156.0
TCGA-CV-5436-01A	0 years, male, stage:Stage IVA, dead, 584 days	152.5
TCGA-KU-A66T-01A	0 years, female, white, stage:Stage IVA, alive, 552 days	151.8
TCGA-CR-6473-01A	0 years, male, white, stage:'--, alive, 1125 days	149.2
TCGA-CR-7371-01A	0 years, female, white, stage:Stage III, dead, 94 days	149.1
TCGA-UF-A71B-01A	0 years, male, white, stage:Stage IVA, alive, 1506 days	146.3
TCGA-CV-6003-01A	0 years, female, white, stage:Stage III, alive, 1665 days	145.7
TCGA-MT-A51X-01A	0 years, male, white, stage:Stage IVA, alive, 242 days	145.7
TCGA-CR-7369-01A	0 years, male, white, stage:Stage IVA, dead, 1090 days	145.2
TCGA-CN-4733-01A	0 years, male, white, stage:Stage III, alive, 1586 days	144.2
TCGA-CN-A497-01A	0 years, male, stage:Stage III, alive, 1065 days	141.6
TCGA-F7-A50I-01A	0 years, male, white, stage:Stage IVA, alive, 92 days	140.2
TCGA-D6-6827-01A	0 years, female, white, stage:Stage I, alive, 568 days	136.6
TCGA-CV-7238-01A	0 years, female, white, stage:Stage II, alive, 2727 days	132.5
TCGA-F7-A50J-01A	0 years, female, white, stage:Stage III, alive, 947 days	132.2
TCGA-CV-6951-01A	0 years, male, white, stage:Stage IVA, dead, 915 days	131.7
TCGA-CV-7099-01A	0 years, female, white, stage:Stage II, dead, 243 days	131.4
TCGA-BB-4225-01A	0 years, male, white, stage:'--, alive, 146 days	130.5
TCGA-CV-A45V-01A	0 years, female, white, stage:Stage IVA, dead, 32 days	127.9
TCGA-CN-6011-01A	0 years, male, white, stage:Stage IVA, alive, 933 days	125.7
TCGA-CR-6487-01A	0 years, male, white, stage:Stage I, alive, 234 days	125.5
TCGA-CQ-A4C6-01A	0 years, male, asian, stage:Stage II, alive, 1353 days	121.3
TCGA-CV-6936-01A	0 years, male, white, stage:Stage IVA, dead, 166 days	118.2
TCGA-CN-A642-01A	0 years, male, white, stage:Stage IVB, dead, 82 days	117.1
TCGA-CN-4729-01A	0 years, male, white, stage:Stage III, alive, 392 days	116.5
TCGA-CN-6996-01A	0 years, female, white, stage:Stage IVA, dead, 530 days	116.4
TCGA-CN-4739-01A	0 years, male, white, stage:Stage IVA, dead, 1394 days	115.6
TCGA-CN-6012-01A	0 years, male, white, stage:Stage IVA, alive, 1460 days	114.5
TCGA-CR-7399-01A	0 years, female, white, stage:Stage IVA, alive, 181 days	113.3
TCGA-CQ-5327-01A	0 years, female, asian, stage:Stage IVA, alive, 1660 days	112.2
TCGA-CV-6937-01A	0 years, male, white, stage:Stage II, dead, 624 days	111.8
TCGA-CV-5977-01A	0 years, male, white, stage:Stage IVA, alive, 1840 days	110.3
TCGA-T2-A6X0-01A	0 years, male, white, stage:'--, alive, 216 days	110.3
TCGA-QK-A8Z7-01A	0 years, male, black or african american, stage:Stage IVA, alive, 392 days	110.2
TCGA-CV-5443-01A	0 years, male, black or african american, stage:Stage III, alive, 2784 days	110.0
TCGA-CX-A4AQ-01A	0 years, male, white, stage:Stage IVA, alive, 1555 days	108.9
TCGA-CR-6467-01A	0 years, male, white, stage:Stage III, alive, 1777 days	108.4
TCGA-CV-7183-01A	0 years, male, white, stage:Stage II, alive, 3981 days	108.2
TCGA-CR-6481-01A	0 years, male, white, stage:'--, alive, 311 days	107.6
TCGA-BA-A4IH-01A	0 years, male, white, stage:'--, alive, 622 days	107.4
TCGA-CV-6948-01A	0 years, female, white, stage:Stage IVB, dead, 1289 days	106.9
TCGA-HD-A6HZ-01A	0 years, female, white, stage:Stage III, alive, 111 days	106.6
TCGA-CV-5440-01A	0 years, male, white, stage:Stage IVA, alive, 3270 days	106.3
TCGA-BA-4076-01A	0 years, male, white, stage:'--, dead, 415 days	105.9
TCGA-CV-7428-01A	0 years, male, white, stage:Stage IVA, dead, 1671 days	105.3
TCGA-CQ-5331-01A	0 years, female, white, stage:'--, alive, 1399 days	103.0
TCGA-CN-6995-01A	0 years, male, white, stage:Stage IVA, dead, 112 days	102.4
TCGA-CV-A45W-01A	0 years, male, white, stage:Stage II, dead, 1398 days	102.3
TCGA-CQ-7068-01A	0 years, female, white, stage:Stage II, alive, 1309 days	102.2
TCGA-IQ-A6SG-01A	0 years, female, white, stage:Stage III, alive, 579 days	101.8
TCGA-CV-5432-01A	0 years, male, white, stage:Stage III, alive, 3930 days	101.1
TCGA-BA-A6DD-01A	0 years, male, black or african american, stage:Stage IVA, dead, 173 days	100.3
TCGA-BA-A4II-01A	0 years, male, white, stage:Stage II, alive, 918 days	100.2
TCGA-KU-A66S-01A	0 years, female, white, stage:Stage III, dead, 406 days	99.2
TCGA-UF-A7JK-01A	0 years, male, stage:Stage IVA, dead, 424 days	98.4
TCGA-CV-A45Z-01A	0 years, male, white, stage:'--, dead, 1466 days	97.0
TCGA-BA-A6DB-01A	0 years, female, white, stage:Stage I, alive, 216 days	96.8
TCGA-CV-5966-01A	0 years, female, white, stage:Stage IVA, dead, 545 days	96.3
TCGA-CV-6938-01A	0 years, male, white, stage:Stage II, dead, 144 days	95.2
TCGA-F7-7848-01A	0 years, male, white, stage:Stage IVA, alive, 1131 days	94.8
TCGA-D6-6823-01A	0 years, male, white, stage:Stage II, alive, 701 days	94.7
TCGA-CR-7389-01A	0 years, male, black or african american, stage:'--, alive, 392 days	94.4
TCGA-CR-6491-01A	0 years, male, black or african american, stage:Stage IVA, alive, 693 days	94.1
TCGA-CR-7373-01A	0 years, male, white, stage:Stage IVA, alive, 889 days	92.9
TCGA-CV-7095-01A	0 years, female, stage:Stage II, dead, 572 days	90.2
TCGA-C9-A47Z-01A	0 years, female, asian, stage:Stage III, dead, 191 days	89.8
TCGA-BA-5151-01A	0 years, male, white, stage:Stage IVA, alive, 722 days	88.6
TCGA-P3-A5Q5-01A	0 years, male, white, stage:Stage IVA, alive, 910 days	88.3
TCGA-CV-7418-01A	0 years, male, black or african american, stage:Stage IVA, dead, 789 days	87.8
TCGA-CV-7437-01A	0 years, male, stage:Stage II, dead, 506 days	87.5
TCGA-F7-8489-01A	0 years, male, white, stage:Stage II, alive, 658 days	87.4
TCGA-UF-A71E-01A	0 years, male, white, stage:Stage IVA, dead, 1504 days	86.2
TCGA-CV-6945-01A	0 years, male, white, stage:Stage IVA, dead, 366 days	84.6
TCGA-D6-A4ZB-01A	0 years, male, white, stage:Stage III, alive, 376 days	83.4
TCGA-CR-5248-01A	0 years, male, white, stage:'--, alive, 1663 days	83.1
TCGA-UF-A7JC-01A	0 years, male, white, stage:Stage IVA, dead, 546 days	82.4
TCGA-BA-A6DJ-01A	0 years, male, asian, stage:Stage IVA, dead, 407 days	80.4
TCGA-F7-A624-01A	0 years, male, white, stage:Stage II, alive, 378 days	80.0
TCGA-CN-4725-01A	0 years, male, white, stage:Stage II, alive, 1157 days	79.9
TCGA-CN-A49B-01A	0 years, male, white, stage:Stage III, alive, 904 days	79.0
TCGA-CN-6988-01A	0 years, male, white, stage:Stage IVA, alive, 318 days	75.3
TCGA-QK-A6VC-01A	0 years, female, black or african american, stage:Stage IVA, alive, 600 days	74.9
TCGA-P3-A6T7-01A	0 years, male, white, stage:Stage IVA, dead, 487 days	73.1
TCGA-P3-A6T5-01A	0 years, female, white, stage:Stage IVA, dead, 882 days	72.2
TCGA-CV-7430-01A	0 years, male, white, stage:Stage IVA, dead, 495 days	71.2
TCGA-CV-7432-01A	0 years, male, white, stage:Stage II, dead, 2570 days	70.8
TCGA-HL-7533-01A	0 years, male, white, stage:'--, alive, 1057 days	69.6
TCGA-CR-7404-01A	0 years, male, white, stage:'--, alive, 1472 days	69.3
TCGA-CV-7427-01A	0 years, female, white, stage:Stage II, dead, 4760 days	69.2
TCGA-CQ-A4CD-01A	0 years, male, white, stage:Stage IVA, alive, 1022 days	68.9
TCGA-CN-6023-01A	0 years, male, white, stage:Stage IVA, alive, 1584 days	68.9
TCGA-BB-4217-01A	0 years, male, black or african american, stage:Stage IVA, alive, 187 days	66.7
TCGA-BB-A5HZ-01A	0 years, male, white, stage:Stage IVA, alive, 827 days	66.1
TCGA-CR-5249-01A	0 years, female, white, stage:Stage II, alive, 1152 days	65.8
TCGA-CN-4738-01A	0 years, male, white, stage:Stage IVA, dead, 436 days	62.9
TCGA-CN-A499-01A	0 years, female, white, stage:Stage II, alive, 717 days	61.7
TCGA-CV-A6JT-01A	0 years, male, white, stage:Stage II, alive, 852 days	61.6
TCGA-HD-7229-01A	0 years, male, white, stage:Stage IVA, alive, 1027 days	61.3
TCGA-CV-7253-01A	0 years, male, black or african american, stage:Stage IVA, dead, 361 days	61.2
TCGA-CN-4741-01A	0 years, male, white, stage:Stage IVA, alive, 2239 days	61.0
TCGA-QK-A64Z-01A	0 years, female, white, stage:Stage IVA, dead, 641 days	60.7
TCGA-BA-5153-01A	0 years, male, white, stage:'--, dead, 1762 days	59.5
TCGA-T2-A6WX-01A	0 years, female, white, stage:'--, dead, 209 days	59.4
TCGA-BA-5558-01A	0 years, male, white, stage:'--, alive, 1995 days	58.9
TCGA-CQ-5323-01A	0 years, male, white, stage:Stage I, alive, 1466 days	58.1
TCGA-BA-5152-01A	0 years, male, white, stage:Stage IVA, alive, 1288 days	57.0
TCGA-BA-5555-01A	0 years, male, black or african american, stage:Stage IVA, alive, 520 days	56.5
TCGA-CV-A6K2-01A	0 years, male, white, stage:Stage IVA, dead, 317 days	54.7
TCGA-QK-A6IF-01A	0 years, male, white, stage:'--, alive, 704 days	54.1
TCGA-MT-A67F-01A	0 years, female, white, stage:Stage IVA, alive, 384 days	53.2
TCGA-CV-7425-01A	0 years, female, white, stage:Stage III, dead, 1718 days	52.7
TCGA-P3-A6T4-01A	0 years, male, white, stage:Stage IVA, dead, 62 days	52.0
TCGA-CR-7364-01A	0 years, male, white, stage:Stage III, alive, 1435 days	52.0
TCGA-CV-7407-01A	0 years, female, white, stage:Stage II, dead, 1081 days	51.7
TCGA-CR-7368-01A	0 years, male, white, stage:Stage IVA, alive, 1245 days	51.1
TCGA-D6-A74Q-01A	0 years, male, white, stage:Stage IVA, alive, 710 days	50.2
TCGA-CV-7250-01A	0 years, male, white, stage:Stage IVA, dead, 2900 days	48.2
TCGA-CV-7434-01A	0 years, male, white, stage:Stage IVA, dead, 218 days	48.0
TCGA-CR-7374-01A	0 years, female, white, stage:'--, alive, 30 days	47.1
TCGA-DQ-7591-01A	0 years, male, white, stage:'--, alive, 622 days	47.1
TCGA-HD-A634-01A	0 years, male, white, stage:Stage IVA, dead, 130 days	46.1
TCGA-CR-7402-01A	0 years, male, white, stage:'--, alive, 911 days	45.6
TCGA-CV-A6JE-01A	0 years, male, white, stage:'--, alive, 1075 days	45.0
TCGA-D6-A6EO-01A	0 years, male, white, stage:Stage IVA, alive, 759 days	44.9
TCGA-CN-A63W-01A	0 years, female, white, stage:Stage IVA, dead, 377 days	44.0
TCGA-CV-A461-01A	0 years, male, white, stage:'--, dead, 2064 days	43.5
TCGA-F7-A623-01A	0 years, male, white, stage:Stage IVA, alive, 616 days	43.1
TCGA-CN-A63T-01A	0 years, male, white, stage:Stage IVA, alive, 225 days	41.6
TCGA-CR-6492-01A	0 years, male, white, stage:Stage III, alive, 479 days	40.2
TCGA-BA-6870-01A	0 years, female, black or african american, stage:'--, dead, 451 days	39.9
TCGA-D6-6516-01A	0 years, male, white, stage:Stage I, alive, 773 days	37.3
TCGA-F7-A50G-01A	0 years, male, white, stage:Stage III, alive, 616 days	36.5
TCGA-IQ-A6SH-01A	0 years, male, black or african american, stage:Stage III, alive, 471 days	36.3
TCGA-QK-A8ZA-01A	0 years, male, black or african american, stage:'--, dead, 371 days	35.9
TCGA-CN-6021-01A	0 years, female, white, stage:'--, dead, 276 days	35.2
TCGA-CN-A6V3-01A	0 years, male, white, stage:Stage IVA, alive, 742 days	35.1
TCGA-CN-6998-01A	0 years, male, white, stage:Stage IVA, dead, 357 days	34.6
TCGA-CN-A6V6-01A	0 years, male, white, stage:Stage IVA, alive, 635 days	34.5
TCGA-CV-A45U-01A	0 years, male, white, stage:Stage IVA, dead, 1079 days	33.9
TCGA-QK-A6IH-01A	0 years, female, white, stage:Stage IVB, alive, 653 days	33.9
TCGA-CQ-6220-01A	0 years, male, white, stage:Stage III, dead, 985 days	33.8
TCGA-CR-7385-01A	0 years, male, white, stage:'--, alive, 997 days	33.4
TCGA-BA-A6DI-01A	0 years, male, black or african american, stage:'--, dead, 336 days	33.3
TCGA-D6-A6EQ-01A	0 years, male, white, stage:Stage IVA, alive, 368 days	33.3
TCGA-KU-A6H8-01A	0 years, male, white, stage:Stage IVA, dead, 327 days	33.2
TCGA-CV-A6JU-01A	0 years, female, white, stage:Stage IVB, alive, 110 days	32.8
TCGA-CN-4730-01A	0 years, male, white, stage:Stage IVA, alive, 817 days	32.2
TCGA-CV-A45O-01A	0 years, male, white, stage:'--, alive, 851 days	31.3
TCGA-CN-5365-01A	0 years, male, white, stage:Stage IVB, dead, 351 days	31.1
TCGA-CV-7089-01A	0 years, male, white, stage:Stage IVA, dead, 1972 days	30.3
TCGA-DQ-7588-01A	0 years, male, white, stage:'--, dead, 427 days	30.2
TCGA-MT-A51W-01A	0 years, female, white, stage:Stage I, alive, 437 days	29.1
TCGA-P3-A5QF-01A	0 years, male, white, stage:Stage IVA, dead, 330 days	29.0
TCGA-CN-A6UY-01A	0 years, male, white, stage:Stage IVA, alive, 713 days	28.5
TCGA-F7-A620-01A	0 years, male, white, stage:Stage III, alive, 543 days	28.3
TCGA-CQ-6223-01A	0 years, male, white, stage:Stage II, alive, 1428 days	28.0
TCGA-CQ-7065-01A	0 years, male, asian, stage:Stage II, alive, 1628 days	27.4
TCGA-P3-A6T6-01A	0 years, male, white, stage:Stage IVA, dead, 395 days	27.0
TCGA-MT-A7BN-01A	0 years, male, white, stage:Stage IVA, alive, 469 days	26.8
TCGA-P3-A5QE-01A	0 years, male, white, stage:Stage III, alive, 1559 days	26.8
TCGA-HD-8634-01A	0 years, female, white, stage:Stage I, dead, 385 days	26.4
TCGA-CQ-A4CE-01A	0 years, female, stage:Stage II, alive, 897 days	25.3
TCGA-CV-6433-01A	0 years, male, white, stage:Stage II, alive, 641 days	24.3
TCGA-CN-5374-01A	0 years, female, white, stage:Stage IVA, dead, 1732 days	23.6
TCGA-CN-A498-01A	0 years, female, white, stage:Stage III, dead, 773 days	23.6
TCGA-P3-A6SW-01A	0 years, male, white, stage:Stage IVB, alive, 1120 days	23.1
TCGA-C9-A480-01A	0 years, female, asian, stage:Stage III, alive, 386 days	22.5
TCGA-CR-6480-01A	0 years, male, white, stage:'--, alive, 362 days	22.0
TCGA-TN-A7HJ-01A	0 years, male, white, stage:Stage IVA, alive, 403 days	22.0
TCGA-BB-4227-01A	0 years, male, white, stage:Stage IVA, alive, 134 days	21.8
TCGA-F7-A61V-01A	0 years, male, white, stage:Stage II, alive, 759 days	21.7
TCGA-UF-A719-01A	0 years, male, stage:Stage II, alive, 1663 days	21.5
TCGA-CV-A45X-01A	0 years, male, white, stage:Stage IVA, dead, 198 days	21.3
TCGA-CV-A463-01A	0 years, female, white, stage:Stage IVA, dead, 23 days	21.0
TCGA-D6-A6EN-01A	0 years, male, white, stage:Stage III, alive, 687 days	20.9
TCGA-UF-A71D-01A	0 years, female, white, stage:Stage IVA, alive, 1461 days	20.9
TCGA-BA-A6DE-01A	0 years, female, white, stage:Stage II, alive, 440 days	20.8
TCGA-CV-5439-01A	0 years, male, white, stage:Stage IVA, dead, 546 days	20.5
TCGA-F7-A61S-01A	0 years, male, white, stage:Stage III, alive, 576 days	19.8
TCGA-BA-6869-01A	0 years, male, white, stage:Stage III, alive, 644 days	19.7
TCGA-BB-A6UM-01A	0 years, male, white, stage:Stage III, alive, 393 days	19.6
TCGA-CV-6953-01A	0 years, female, white, stage:Stage III, dead, 1641 days	19.4
TCGA-CV-7242-01A	0 years, female, white, stage:Stage II, alive, 1095 days	18.5
TCGA-QK-A6V9-01A	0 years, male, white, stage:Stage II, alive, 833 days	18.0
TCGA-CN-A641-01A	0 years, male, white, stage:Stage IVA, alive, 367 days	17.7
TCGA-QK-A8Z8-01A	0 years, female, black or african american, stage:Stage IVC, dead, 171 days	17.6
TCGA-CV-A45P-01A	0 years, female, white, stage:Stage I, alive, 639 days	16.9
TCGA-CX-7086-01A	0 years, male, black or african american, stage:Stage III, alive, 573 days	16.4
TCGA-CV-A465-01A	0 years, male, white, stage:Stage III, dead, 215 days	16.1
TCGA-IQ-7632-01A	0 years, female, white, stage:Stage IVA, alive, 441 days	14.9
TCGA-CV-A6JY-01A	0 years, male, white, stage:Stage IVA, alive, 646 days	14.1
TCGA-CQ-6225-01A	0 years, male, white, stage:Stage III, dead, 403 days	13.9
TCGA-CN-A49C-01A	0 years, male, white, stage:'--, alive, 645 days	13.1
TCGA-BA-A4IG-01A	0 years, male, white, stage:'--, alive, 855 days	13.0
TCGA-CV-6441-01A	0 years, male, white, stage:Stage III, dead, 292 days	12.9
TCGA-KU-A6H7-01A	0 years, female, white, stage:Stage IVA, alive, 586 days	12.9
TCGA-UF-A7JF-01A	0 years, male, white, stage:Stage IVA, alive, 1686 days	12.5
TCGA-CN-A63U-01A	0 years, male, white, stage:Stage IVA, alive, 964 days	12.4
TCGA-MZ-A7D7-01A	0 years, male, white, stage:Stage IVA, alive, 547 days	11.7
TCGA-D6-A6EP-01A	0 years, male, white, stage:Stage III, alive, 424 days	11.5
TCGA-RS-A6TP-01A	0 years, male, white, stage:Stage II, alive, 516 days	11.0
TCGA-TN-A7HL-01A	0 years, male, white, stage:Stage IVA, alive, 619 days	10.7
TCGA-QK-AA3J-01A	0 years, male, black or african american, stage:Stage I, alive, 466 days	10.4
TCGA-CV-A6K1-01A	0 years, male, white, stage:Stage IVA, alive, 685 days	10.2
TCGA-BB-4224-01A	0 years, male, white, stage:Stage IVA, alive, 278 days	10.1
TCGA-BB-8601-01A	0 years, male, black or african american, stage:Stage III, alive, 624 days	9.9
TCGA-IQ-A61I-01A	0 years, male, black or african american, stage:Stage IVA, dead, 2 days	9.7
TCGA-BA-7269-01A	0 years, male, white, stage:Stage III, alive, 1273 days	9.2
TCGA-BA-A6D8-01A	0 years, male, black or african american, stage:Stage IVA, alive, 850 days	9.0
TCGA-T2-A6WZ-01A	0 years, male, white, stage:'--, dead, 484 days	8.4
TCGA-CV-7180-01A	0 years, male, white, stage:Stage II, dead, 327 days	7.8
TCGA-F7-A622-01A	0 years, male, white, stage:Stage III, dead, 359 days	7.6
TCGA-MZ-A6I9-01A	0 years, male, white, stage:'--, dead, 489 days	7.3
TCGA-TN-A7HI-01A	0 years, male, white, stage:Stage IVA, alive, 412 days	7.3
TCGA-CN-A6V7-01A	0 years, male, white, stage:Stage IVA, alive, 594 days	6.7
TCGA-D6-A6EM-01A	0 years, female, white, stage:Stage III, alive, 232 days	6.2
TCGA-H7-7774-01A	0 years, female, white, stage:Stage IVA, alive, 407 days	5.7
TCGA-IQ-A61G-01A	0 years, male, white, stage:Stage IVA, alive, 360 days	4.8
TCGA-CV-A6JM-01A	0 years, male, white, stage:'--, dead, 194 days	4.8
TCGA-BA-A6DA-01A	0 years, female, white, stage:Stage IVA, alive, 351 days	4.4
TCGA-QK-A6IJ-01A	0 years, male, white, stage:Stage III, alive, 387 days	4.0
TCGA-BA-A6DL-01A	0 years, male, white, stage:'--, alive, 623 days	4.0
TCGA-CV-A6JN-01A	0 years, male, white, stage:'--, alive, 906 days	4.0
TCGA-CV-5442-01A	0 years, female, white, stage:Stage IVA, alive, 2327 days	3.9
TCGA-CV-6436-01A	0 years, male, white, stage:Stage IVA, alive, 1899 days	3.8
TCGA-MT-A67A-01A	0 years, female, white, stage:Stage I, alive, 914 days	3.6
TCGA-QK-A6II-01A	0 years, male, white, stage:Stage IVA, dead, 284 days	3.5
TCGA-D6-A6EK-01A	0 years, male, white, stage:Stage III, alive, 875 days	3.3
TCGA-CV-6955-01A	0 years, female, white, stage:Stage II, dead, 334 days	2.4
TCGA-HD-A6I0-01A	0 years, male, white, stage:Stage IVA, alive, 210 days	2.4
TCGA-UF-A7JS-01A	0 years, male, white, stage:Stage IVA, dead, 680 days	1.4
TCGA-D6-A6ES-01A	0 years, male, white, stage:Stage IVA, alive, 389 days	1.3
TCGA-CV-A45Q-01A	0 years, female, white, stage:'--, dead, 5152 days	0.4
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HEAD AND NECK SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)

Number of samples

183

Samples

Sample ID	Sample type	nRPX
CPT0245550003	Tumor	1.8
CPT0169730003	Tumor	1.6
CPT0245010003	Tumor	1.5
CPT0237620004	Tumor	1.3
CPT0095040003	Tumor	1.3
CPT0013210004	Tumor	1.3
CPT0245130003	Tumor	1.2
CPT0169890003	Tumor	1.2
CPT0163480003	Tumor	1.0
CPT0094560004	Tumor	1.0
CPT0246620003	Tumor	1.0
CPT0235460003	Tumor	1.0
CPT0235910003	Tumor	0.9
CPT0226340003	Tumor	0.9
CPT0094420004	Tumor	0.8
CPT0199820003	Tumor	0.8
CPT0194250003	Tumor	0.7
CPT0123260003	Tumor	0.7
CPT0261520003	Tumor	0.7
CPT0088060004	Tumor	0.6
CPT0008930003	Tumor	0.6
CPT0199710003	Normal	0.6
CPT0222360003	Tumor	0.5
CPT0162940003	Tumor	0.5
CPT0196210003	Tumor	0.5
CPT0245730003	Tumor	0.5
CPT0194800003	Normal	0.5
CPT0237130004	Tumor	0.4
CPT0094350004	Tumor	0.4
CPT0245350003	Tumor	0.4
CPT0194960003	Tumor	0.4
CPT0094280004	Tumor	0.4
CPT0087820003	Tumor	0.3
CPT0177710003	Tumor	0.3
CPT0199700003	Tumor	0.3
CPT0163340003	Tumor	0.3
CPT0245680003	Tumor	0.3
CPT0245500003	Tumor	0.2
CPT0163090003	Tumor	0.2
CPT0163160003	Tumor	0.2
CPT0123180003	Tumor	0.2
CPT0237480004	Tumor	0.2
CPT0248520003	Tumor	0.2
CPT0011130005	Tumor	0.1
CPT0245140003	Normal	0.1
CPT0169640003	Tumor	0.1
CPT0241980004	Tumor	0.1
CPT0194420003	Tumor	0.1
CPT0088410003	Tumor	0.0
CPT0190850003	Tumor	0.0
CPT0024810003	Tumor	0.0
CPT0163240003	Tumor	0.0
CPT0246590003	Tumor	0.0
CPT0244890004	Tumor	0.0
CPT0162990004	Tumor	-0.1
CPT0177200003	Tumor	-0.1
CPT0243090003	Tumor	-0.1
CPT0163790003	Tumor	-0.1
CPT0163530003	Tumor	-0.1
CPT0163840003	Tumor	-0.1
CPT0013030003	Normal	-0.2
CPT0226250004	Tumor	-0.2
CPT0199880003	Tumor	-0.2
CPT0220620003	Normal	-0.2
CPT0162890003	Tumor	-0.2
CPT0245060004	Tumor	-0.2
CPT0195860003	Tumor	-0.2
CPT0245300003	Tumor	-0.2
CPT0245400003	Tumor	-0.2
CPT0169920003	Normal	-0.2
CPT0184530003	Tumor	-0.2
CPT0163740003	Tumor	-0.3
C3N-02693-06	Normal	-0.3
CPT0237150003	Normal	-0.3
CPT0201830004	Tumor	-0.3
CPT0195880003	Normal	-0.3
CPT0226440003	Tumor	-0.3
CPT0245190003	Normal	-0.3
CPT0011290003	Tumor	-0.3
CPT0223970003	Tumor	-0.3
CPT0246540003	Tumor	-0.3
CPT0123280003	Normal	-0.3
CPT0013430003	Tumor	-0.3
CPT0008520008	Tumor	-0.3
CPT0084630009	Tumor	-0.4
CPT0127050003	Tumor	-0.4
CPT0245450003	Tumor	-0.4
CPT0246670003	Tumor	-0.4
CPT0008630003	Tumor	-0.4
CPT0248330003	Tumor	-0.4
CPT0176770003	Tumor	-0.4
CPT0245180003	Tumor	-0.5
CPT0245230004	Tumor	-0.5
C3N-01758-04	Normal	-0.5
CPT0013250003	Normal	-0.5
C3N-04276-06	Normal	-0.5
CPT0236850004	Tumor	-0.5
CPT0196040003	Tumor	-0.5
CPT0226450003	Normal	-0.5
CPT0194260003	Normal	-0.5
CPT0226130003	Tumor	-0.5
CPT0199890003	Normal	-0.5
CPT0123190003	Normal	-0.5
CPT0245630003	Tumor	-0.5
CPT0223460003	Normal	-0.6
CPT0163490003	Normal	-0.6
CPT0195700003	Normal	-0.6
C3N-04279-05	Normal	-0.6
CPT0207870004	Tumor	-0.6
CPT0245020003	Normal	-0.6
CPT0220610003	Tumor	-0.6
CPT0236870003	Normal	-0.6
CPT0013130003	Tumor	-0.6
CPT0013460003	Normal	-0.6
CPT0223450003	Tumor	-0.6
CPT0084650004	Normal	-0.6
CPT0011320003	Normal	-0.7
C3N-01859-04	Normal	-0.7
CPT0196060003	Normal	-0.7
CPT0236620003	Tumor	-0.7
CPT0245600003	Tumor	-0.7
CPT0237500003	Normal	-0.7
CPT0008960003	Normal	-0.7
CPT0163650003	Tumor	-0.7
CPT0163800003	Normal	-0.7
CPT0013000004	Tumor	-0.7
CPT0242000004	Normal	-0.8
CPT0250310003	Tumor	-0.8
CPT0235920003	Normal	-0.8
CPT0195680003	Tumor	-0.8
CPT0177220003	Normal	-0.8
CPT0177390003	Tumor	-0.8
CPT0226030003	Tumor	-0.8
CPT0201860004	Normal	-0.8
CPT0163720003	Normal	-0.8
CPT0190860003	Normal	-0.8
CPT0163430003	Normal	-0.8
CPT0245560003	Normal	-0.8
CPT0087990003	Tumor	-0.9
CPT0163600003	Tumor	-0.9
CPT0199830003	Normal	-0.9
C3N-04275-05	Normal	-0.9
CPT0245410003	Normal	-0.9
CPT0226090003	Normal	-0.9
CPT0163020003	Normal	-0.9
CPT0244940004	Tumor	-1.0
CPT0177010003	Tumor	-1.0
CPT0094580003	Normal	-1.0
CPT0256560003	Tumor	-1.0
CPT0237640003	Normal	-1.0
CPT0094490004	Tumor	-1.0
CPT0278700002	Normal	-1.0
CPT0226390003	Tumor	-1.0
CPT0226400003	Normal	-1.0
CPT0088080003	Normal	-1.0
CPT0088010003	Normal	-1.0
CPT0243140004	Normal	-1.1
CPT0226270003	Normal	-1.1
C3N-00857-05	Normal	-1.1
CPT0222200003	Normal	-1.1
CPT0088430003	Normal	-1.2
CPT0281470002	Normal	-1.2
CPT0163410003	Tumor	-1.2
CPT0163910003	Tumor	-1.2
CPT0194790003	Tumor	-1.3
CPT0163610003	Normal	-1.3
CPT0235470002	Normal	-1.3
CPT0163860003	Normal	-1.3
C3N-01620-05	Normal	-1.3
CPT0163250003	Normal	-1.3
C3N-00295-05	Normal	-1.4
CPT0222180003	Tumor	-1.4
CPT0163170003	Normal	-1.4
CPT0226350003	Normal	-1.4
CPT0248350003	Normal	-1.5
CPT0245460003	Normal	-1.5
CPT0236640003	Normal	-1.6
CPT0229220002	Normal	-1.8
CPT0169740004	Normal	-1.8
CPT0229230003	Normal	N/A
CPT0169750003	Normal	N/A
CPT0229210003	Tumor	N/A
CPT0229190003	Tumor	N/A
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HEAD AND NECK CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA027066	Antibody CAB000126
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Squamous cell carcinoma, NOS
Squamous cell carcinoma, NOS Squamous cell carcinoma, metastatic, NOS
Adenocarcinoma, NOS Adenoma, NOS