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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FN1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
686.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
3093.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
2968.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
2943.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
2754.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
2644.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
2323.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
2322.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
2317.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
2293.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
1994.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1994.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
1937.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
1929.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
1770.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
1761.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
1719.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
1702.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
1660.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
1619.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
1616.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
1615.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
1465.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
1454.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
1451.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
1417.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
1417.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
1398.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
1380.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
1376.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
1371.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
1329.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
1326.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
1326.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
1314.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
1310.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
1307.4
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
1307.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
1306.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
1301.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
1298.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
1293.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1286.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
1278.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
1276.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
1270.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
1267.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
1240.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
1239.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
1226.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
1220.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
1213.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
1208.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
1199.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
1174.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
1160.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
1158.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
1151.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
1150.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
1145.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
1136.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
1131.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
1130.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
1122.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
1119.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
1116.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
1114.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
1113.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
1112.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
1100.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
1073.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
1068.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
1059.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
1047.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
1025.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
1015.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
1013.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
1010.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
994.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
991.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
986.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
979.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
978.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
972.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
969.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
962.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
959.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
952.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
952.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
948.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
940.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
932.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
927.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
917.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
914.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
913.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
908.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
907.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
905.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
901.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
898.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
898.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
894.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
889.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
878.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
876.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
873.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
863.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
860.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
858.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
857.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
853.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
847.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
845.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
843.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
842.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
835.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
829.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
826.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
821.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
816.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
815.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
813.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
804.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
804.4
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
804.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
803.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
797.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
795.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
793.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
787.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
786.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
786.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
776.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
769.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
753.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
746.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
741.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
739.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
737.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
736.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
736.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
733.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
727.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
719.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
711.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
707.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
702.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
702.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
696.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
693.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
691.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
690.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
690.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
684.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
683.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
682.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
681.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
677.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
677.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
672.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
670.8
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
669.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
666.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
664.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
663.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
662.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
652.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
649.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
645.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
645.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
645.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
643.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
639.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
638.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
624.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
620.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
619.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
615.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
614.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
613.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
611.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
603.2
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
601.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
601.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
592.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
590.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
573.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
573.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
569.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
569.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
565.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
553.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
552.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
542.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
540.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
539.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
537.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
536.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
532.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
527.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
527.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
521.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
518.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
510.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
501.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
501.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
497.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
489.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
488.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
483.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
477.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
474.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
473.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
471.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
470.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
466.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
464.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
463.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
463.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
462.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
459.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
451.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
450.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
449.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
448.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
446.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
446.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
433.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
433.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
432.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
431.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
424.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
418.9
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
414.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
400.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
399.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
397.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
395.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
394.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
392.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
385.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
385.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
384.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
382.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
382.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
381.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
380.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
378.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
367.4
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
365.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
365.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
360.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
360.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
356.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
356.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
355.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
352.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
348.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
348.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
347.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
341.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
337.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
333.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
331.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
329.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
328.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
327.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
323.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
323.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
314.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
313.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
311.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
308.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
305.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
301.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
299.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
294.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
293.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
293.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
290.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
289.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
280.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
272.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
260.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
251.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
246.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
243.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
242.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
242.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
242.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
241.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
241.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
239.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
232.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
229.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
226.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
219.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
216.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
207.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
206.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
203.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
203.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
198.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
192.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
186.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
184.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
181.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
181.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
176.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
172.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
167.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
164.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
163.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
157.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
150.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
149.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
148.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
148.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
128.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
118.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
117.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
116.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
112.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
110.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
109.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
103.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
90.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
87.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
82.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
76.3
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
75.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
74.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
74.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
72.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
68.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
60.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
60.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
59.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
57.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
56.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
54.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
49.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
42.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
37.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
32.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
27.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
25.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
25.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
23.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
22.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
21.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
21.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
20.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
19.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
16.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
16.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
16.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
14.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
14.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
12.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
11.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FN1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
730.9
Number of samples
231
Samples
Sample
Description
TPM
DO48761
0 years, male, NA, stage:2, alive, 870 days
2968.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
2817.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
2648.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
2101.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
1966.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
1907.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
1878.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
1807.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
1763.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
1751.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
1654.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
1627.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
1625.7
DO45155
0 years, male, NA, stage:2, alive, 2160 days
1594.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
1572.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
1568.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
1527.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
1521.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
1513.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
1501.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
1473.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
1403.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
1383.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
1348.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
1343.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
1327.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
1318.7
DO50857
0 years, male, NA, stage:2, alive, 210 days
1314.9
DO45123
0 years, female, NA, stage:2, dead, 570 days
1284.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
1284.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
1237.9
DO45175
0 years, male, NA, stage:2, alive, 1140 days
1230.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
1227.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
1216.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
1210.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
1190.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
1169.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
1127.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
1121.0
DO45145
0 years, male, NA, stage:3, dead, 60 days
1117.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
1112.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
1096.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
1077.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
1056.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
1053.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
1050.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
1029.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
1029.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
1021.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
1012.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
997.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
994.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
978.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
968.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
947.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
939.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
938.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
932.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
931.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
931.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
928.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
907.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
905.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
903.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
896.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
893.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
879.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
879.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
878.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
878.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
869.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
846.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
844.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
833.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
825.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
820.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
819.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
816.4
DO50774
0 years, female, NA, stage:2, alive, 720 days
807.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
793.6
DO45191
0 years, female, NA, stage:2, alive, 1200 days
784.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
781.7
DO50820
0 years, female, NA, stage:3, alive, 510 days
772.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
765.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
757.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
756.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
754.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
753.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
751.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
751.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
747.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
737.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
728.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
722.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
721.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
713.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
710.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
686.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
673.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
665.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
660.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
659.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
656.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
653.1
DO48700
0 years, female, NA, stage:2, alive, 810 days
652.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
651.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
648.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
639.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
629.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
629.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
627.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
623.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
622.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
620.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
616.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
615.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
614.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
611.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
603.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
603.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
587.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
584.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
582.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
577.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
576.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
567.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
566.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
560.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
552.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
552.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
550.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
547.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
543.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
536.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
534.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
532.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
530.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
515.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
510.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
508.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
504.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
502.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
498.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
491.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
491.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
485.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
477.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
475.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
474.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
473.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
470.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
459.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
457.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
450.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
449.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
445.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
439.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
436.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
431.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
430.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
429.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
428.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
426.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
422.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
422.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
420.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
416.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
414.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
413.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
406.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
403.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
403.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
403.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
399.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
398.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
396.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
392.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
383.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
381.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
376.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
374.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
371.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
371.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
370.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
370.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
357.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
353.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
350.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
348.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
347.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
342.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
341.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
332.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
321.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
320.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
320.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
315.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
308.5
DO50815
0 years, male, NA, stage:3, alive, 150 days
302.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
301.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
299.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
295.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
290.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
283.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
281.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
272.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
271.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
264.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
257.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
248.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
243.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
230.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
221.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
219.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
218.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
214.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
206.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
206.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
197.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
185.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
184.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
169.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
163.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
160.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
115.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
107.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
105.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
76.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
68.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
58.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
56.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
425
Tumor
2.3
877
Tumor
2.2
375
Tumor
1.8
343
Tumor
1.6
635
Tumor
1.6
363
Tumor
1.5
517
Tumor
1.5
647
Tumor
1.5
113
Tumor
1.3
671
Tumor
1.3
223
Tumor
1.3
367
Tumor
1.2
391
Tumor
1.2
463
Tumor
1.1
977
Tumor
1.1
171
Tumor
1.1
135
Tumor
1.0
665
Tumor
1.0
573
Tumor
1.0
331
Tumor
1.0
112
Tumor
1.0
217
Tumor
0.9
745
Tumor
0.9
535
Tumor
0.9
285
Tumor
0.8
413
Tumor
0.8
1025
Tumor
0.8
435
Tumor
0.7
455
Tumor
0.7
267
Tumor
0.6
567
Tumor
0.6
341
Tumor
0.6
851
Tumor
0.6
487
Tumor
0.6
713
Tumor
0.6
227
Tumor
0.5
161
Tumor
0.5
297
Tumor
0.5
743
Tumor
0.5
937
Tumor
0.5
755
Tumor
0.5
427
Tumor
0.5
431
Tumor
0.4
965
Tumor
0.4
1043
Tumor
0.4
957
Tumor
0.4
1021
Tumor
0.4
981
Tumor
0.4
443
Tumor
0.4
123
Tumor
0.4
185
Tumor
0.3
863
Tumor
0.3
145
Tumor
0.3
355
Tumor
0.3
147
Tumor
0.3
715
Tumor
0.3
311
Tumor
0.2
724
Normal
0.2
131
Tumor
0.2
815
Tumor
0.2
1045
Tumor
0.2
383
Tumor
0.2
823
Tumor
0.2
813
Tumor
0.2
483
Tumor
0.2
923
Tumor
0.2
141
Tumor
0.2
473
Tumor
0.2
433
Tumor
0.2
395
Tumor
0.2
187
Tumor
0.1
1013
Tumor
0.1
571
Tumor
0.1
545
Tumor
0.1
277
Tumor
0.1
477
Tumor
0.1
221
Tumor
0.1
445
Tumor
0.1
951
Tumor
0.1
137
Tumor
0.1
421
Tumor
0.0
387
Tumor
0.0
471
Tumor
0.0
515
Tumor
0.0
967
Tumor
0.0
685
Tumor
0.0
527
Tumor
0.0
697
Tumor
0.0
943
Tumor
0.0
497
Tumor
0.0
525
Tumor
-0.1
975
Tumor
-0.1
361
Tumor
-0.1
537
Tumor
-0.1
191
Tumor
-0.1
617
Tumor
-0.1
857
Tumor
-0.1
451
Tumor
-0.1
663
Tumor
-0.1
493
Tumor
-0.1
817
Tumor
-0.1
385
Tumor
-0.2
533
Tumor
-0.2
195
Tumor
-0.2
883
Tumor
-0.2
353
Tumor
-0.2
915
Tumor
-0.2
357
Tumor
-0.2
727
Tumor
-0.2
127
Tumor
-0.2
313
Tumor
-0.2
213
Tumor
-0.2
925
Tumor
-0.2
125
Tumor
-0.2
963
Tumor
-0.2
737
Tumor
-0.3
553
Tumor
-0.3
271
Tumor
-0.3
1041
Tumor
-0.3
865
Tumor
-0.3
257
Tumor
-0.3
447
Tumor
-0.3
344
Normal
-0.3
917
Tumor
-0.3
192
Normal
-0.3
124
Normal
-0.3
1031
Tumor
-0.3
423
Tumor
-0.3
426
Normal
-0.3
376
Normal
-0.3
741
Tumor
-0.3
365
Tumor
-0.4
538
Normal
-0.4
342
Normal
-0.4
368
Normal
-0.4
428
Normal
-0.4
393
Tumor
-0.4
224
Normal
-0.4
523
Tumor
-0.4
666
Normal
-0.4
283
Tumor
-0.4
354
Normal
-0.4
424
Normal
-0.4
461
Tumor
-0.4
328
Normal
-0.4
615
Tumor
-0.4
261
Tumor
-0.4
814
Normal
-0.4
1027
Tumor
-0.4
672
Normal
-0.4
498
Normal
-0.5
1015
Tumor
-0.5
785
Tumor
-0.5
921
Tumor
-0.5
364
Normal
-0.5
913
Tumor
-0.5
414
Normal
-0.5
536
Normal
-0.5
952
Normal
-0.5
211
Tumor
-0.5
327
Tumor
-0.5
953
Tumor
-0.5
366
Normal
-0.5
491
Tumor
-0.5
172
Normal
-0.5
636
Normal
-0.5
881
Tumor
-0.5
142
Normal
-0.6
648
Normal
-0.6
861
Tumor
-0.6
415
Tumor
-0.6
478
Normal
-0.6
777
Tumor
-0.6
873
Tumor
-0.6
557
Tumor
-0.6
422
Normal
-0.6
474
Normal
-0.6
332
Normal
-0.6
778
Normal
-0.6
284
Normal
-0.6
627
Tumor
-0.6
362
Normal
-0.6
188
Normal
-0.6
358
Normal
-0.6
132
Normal
-0.6
516
Normal
-0.6
351
Tumor
-0.6
228
Normal
-0.6
352
Normal
-0.6
138
Normal
-0.6
411
Tumor
-0.6
456
Normal
-0.6
744
Normal
-0.6
563
Tumor
-0.6
286
Normal
-0.6
128
Normal
-0.6
114
Normal
-0.6
574
Normal
-0.6
278
Normal
-0.7
695
Tumor
-0.7
384
Normal
-0.7
558
Normal
-0.7
468
Normal
-0.7
464
Normal
-0.7
465
Tumor
-0.7
394
Normal
-0.7
212
Normal
-0.7
146
Normal
-0.7
186
Normal
-0.7
162
Normal
-0.7
312
Normal
-0.7
314
Normal
-0.7
662
Normal
-0.7
444
Normal
-0.7
262
Normal
-0.7
392
Normal
-0.7
126
Normal
-0.7
954
Normal
-0.7
386
Normal
-0.7
524
Normal
-0.7
494
Normal
-0.7
298
Normal
-0.7
111
Normal
-0.7
136
Normal
-0.7
513
Tumor
-0.7
911
Tumor
-0.7
434
Normal
-0.7
452
Normal
-0.7
467
Tumor
-0.8
664
Normal
-0.8
983
Tumor
-0.8
976
Normal
-0.8
867
Tumor
-0.8
958
Normal
-0.8
396
Normal
-0.8
196
Normal
-0.8
488
Normal
-0.8
356
Normal
-0.8
148
Normal
-0.8
1042
Normal
-0.8
214
Normal
-0.8
955
Tumor
-0.8
432
Normal
-0.8
564
Normal
-0.8
492
Normal
-0.8
518
Normal
-0.8
388
Normal
-0.8
554
Normal
-0.8
526
Normal
-0.8
481
Tumor
-0.8
956
Normal
-0.8
1028
Normal
-0.8
746
Normal
-0.8
884
Normal
-0.8
722
Normal
-0.8
528
Normal
-0.8
964
Normal
-0.8
568
Normal
-0.8
446
Normal
-0.9
534
Normal
-0.9
914
Normal
-0.9
222
Normal
-0.9
514
Normal
-0.9
944
Normal
-0.9
416
Normal
-0.9
982
Normal
-0.9
756
Normal
-0.9
448
Normal
-0.9
978
Normal
-0.9
546
Normal
-0.9
218
Normal
-0.9
818
Normal
-0.9
258
Normal
-0.9
628
Normal
-0.9
686
Normal
-0.9
466
Normal
-0.9
696
Normal
-0.9
268
Normal
-0.9
786
Normal
-0.9
916
Normal
-0.9
1016
Normal
-0.9
912
Normal
-0.9
661
Tumor
-0.9
1046
Normal
-0.9
232
Normal
-0.9
938
Normal
-0.9
412
Normal
-0.9
723
Tumor
-0.9
616
Normal
-0.9
716
Normal
-0.9
572
Normal
-0.9
984
Normal
-0.9
824
Normal
-1.0
1014
Normal
-1.0
436
Normal
-1.0
618
Normal
-1.0
721
Tumor
-1.0
968
Normal
-1.0
858
Normal
-1.0
882
Normal
-1.0
642
Normal
-1.0
966
Normal
-1.0
878
Normal
-1.0
472
Normal
-1.0
272
Normal
-1.0
1022
Normal
-1.0
868
Normal
-1.0
482
Normal
-1.0
866
Normal
-1.0
484
Normal
-1.0
641
Tumor
-1.0
918
Normal
-1.0
816
Normal
-1.0
714
Normal
-1.0
728
Normal
-1.0
852
Normal
-1.0
926
Normal
-1.1
738
Normal
-1.1
922
Normal
-1.1
462
Normal
-1.1
924
Normal
-1.1
742
Normal
-1.1
1044
Normal
-1.1
1032
Normal
-1.1
864
Normal
-1.1
874
Normal
-1.1
1026
Normal
-1.2
231
Tumor
-1.2
698
Normal
-1.2
862
Normal
-1.4
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.