Expression of FN1 in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

FN1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 645.89

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

686.1

Number of samples

362

Samples

Sample	Description	TPM
TCGA-YA-A8S7-01A	68 years, male, white, stage:Stage IIIA, dead, 412 days	3093.3
TCGA-CC-A7IK-01A	59 years, male, asian, stage:Stage IIIA, dead, 262 days	2968.4
TCGA-BC-A112-01A	80 years, male, white, stage:'--, dead, 153 days	2943.8
TCGA-BC-A8YO-01A	66 years, female, white, stage:Stage IIIC, alive, 562 days	2754.4
TCGA-G3-AAV1-01A	51 years, male, asian, stage:Stage IIIC, dead, 359 days	2644.9
TCGA-2Y-A9GX-01A	68 years, male, white, stage:Stage I, alive, 2442 days	2323.9
TCGA-UB-A7MC-01A	59 years, male, white, stage:Stage IIIA, alive, 500 days	2322.4
TCGA-2Y-A9GS-01A	58 years, male, white, stage:'--, dead, 724 days	2317.6
TCGA-DD-AACH-01A	69 years, male, asian, stage:Stage II, dead, 195 days	2293.6
TCGA-DD-AACK-01A	70 years, male, asian, stage:Stage I, alive, 9 days	1994.5
TCGA-DD-AAD0-01A	73 years, female, asian, stage:Stage I, alive, 137 days	1994.2
TCGA-BC-A10W-01A	50 years, male, asian, stage:'--, dead, 91 days	1937.9
TCGA-FV-A3I1-01A	81 years, female, white, stage:Stage II, dead, 247 days	1929.5
TCGA-EP-A12J-01A	62 years, male, black or african american, stage:Stage I, alive, 570 days	1770.1
TCGA-CC-5258-01A	48 years, male, asian, stage:Stage II, dead, 129 days	1761.0
TCGA-CC-A3MC-01A	54 years, male, asian, stage:Stage IIIA, alive, 363 days	1719.8
TCGA-DD-AADY-01A	55 years, female, asian, stage:Stage I, alive, 555 days	1702.1
TCGA-DD-A4NQ-01A	60 years, male, white, stage:Stage II, dead, 373 days	1660.5
TCGA-DD-AAD2-01A	66 years, male, asian, stage:Stage I, alive, 658 days	1619.1
TCGA-RC-A6M6-01A	75 years, male, white, stage:Stage II, alive, 9 days	1616.7
TCGA-ED-A7XP-01A	53 years, female, asian, stage:Stage II, alive, 400 days	1615.3
TCGA-DD-A4NO-01A	65 years, male, white, stage:Stage I, alive, 2245 days	1465.8
TCGA-G3-A5SJ-01A	59 years, male, white, stage:Stage I, alive, 698 days	1454.4
TCGA-XR-A8TG-01A	58 years, male, white, stage:Stage I, alive, 898 days	1451.2
TCGA-DD-A4ND-01A	56 years, female, white, stage:Stage I, alive, 2746 days	1417.1
TCGA-ZP-A9D2-01A	51 years, male, white, stage:'--, dead, 765 days	1417.0
TCGA-CC-5264-01A	71 years, male, asian, stage:Stage IIIA, dead, 102 days	1398.6
TCGA-FV-A23B-01A	70 years, female, white, stage:Stage II, dead, 1852 days	1380.2
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:Stage I, dead, 52 days	1376.4
TCGA-DD-A118-01A	77 years, female, white, stage:Stage II, alive, 3437 days	1371.0
TCGA-KR-A7K0-01A	65 years, male, white, stage:Stage I, dead, 65 days	1329.9
TCGA-DD-AAEK-01A	51 years, male, asian, stage:Stage II, alive, 1067 days	1326.4
TCGA-DD-AADV-01A	50 years, male, asian, stage:Stage I, alive, 574 days	1326.0
TCGA-DD-A73A-01A	71 years, male, white, stage:Stage I, alive, 728 days	1314.6
TCGA-ZP-A9D0-01A	67 years, female, black or african american, stage:'--, alive, 1091 days	1310.5
TCGA-DD-AAD3-01A	43 years, male, asian, stage:Stage I, alive, 1295 days	1307.4
TCGA-RC-A7SF-01A	66 years, male, asian, stage:Stage I, alive, 579 days	1307.0
TCGA-DD-A1EG-01A	76 years, male, white, stage:Stage I, dead, 1372 days	1306.0
TCGA-DD-A11D-01A	57 years, female, white, stage:Stage I, dead, 1560 days	1301.7
TCGA-DD-A73E-01A	66 years, male, white, stage:Stage I, alive, 44 days	1298.4
TCGA-DD-A114-01A	42 years, male, black or african american, stage:Stage II, dead, 1149 days	1293.5
TCGA-DD-AAEI-01A	72 years, male, asian, stage:Stage I, alive, 1531 days	1286.7
TCGA-DD-AAVS-01A	56 years, male, asian, stage:Stage I, alive, 1823 days	1278.1
TCGA-DD-AACZ-01A	63 years, female, asian, stage:Stage I, dead, 171 days	1276.3
TCGA-DD-AAD1-01A	51 years, female, asian, stage:Stage I, alive, 564 days	1270.8
TCGA-UB-AA0U-01A	60 years, male, white, stage:Stage II, alive, 327 days	1267.0
TCGA-BD-A3ER-01A	62 years, male, white, stage:Stage II, alive, 1115 days	1240.7
TCGA-DD-AADP-01A	45 years, male, asian, stage:Stage I, alive, 458 days	1239.8
TCGA-CC-5263-01A	35 years, male, asian, stage:Stage IIIA, dead, 129 days	1226.2
TCGA-DD-A1EA-01A	68 years, male, asian, stage:Stage II, alive, 2415 days	1220.6
TCGA-DD-A11C-01A	69 years, male, white, stage:Stage I, alive, 662 days	1213.7
TCGA-LG-A6GG-01A	79 years, female, white, stage:Stage II, alive, 387 days	1208.3
TCGA-FV-A3R2-01A	75 years, male, white, stage:Stage I, dead, 194 days	1199.0
TCGA-ZP-A9CZ-01A	72 years, male, asian, stage:'--, alive, 706 days	1174.4
TCGA-GJ-A6C0-01A	75 years, female, white, stage:Stage II, dead, 31 days	1160.8
TCGA-FV-A3R3-01A	38 years, female, white, stage:Stage I, dead, 366 days	1158.9
TCGA-DD-A115-01A	53 years, male, white, stage:Stage IIIA, dead, 2542 days	1151.5
TCGA-K7-AAU7-01A	61 years, male, white, stage:Stage II, alive, 359 days	1150.2
TCGA-BC-A10R-01A	66 years, female, white, stage:'--, dead, 308 days	1145.7
TCGA-DD-AAVW-01A	35 years, male, asian, stage:Stage I, alive, 2317 days	1136.5
TCGA-5C-A9VH-01A	70 years, male, white, stage:Stage I, alive, 322 days	1131.0
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:Stage I, alive, 1900 days	1130.0
TCGA-CC-A9FW-01A	68 years, male, asian, stage:Stage IIIA, alive, 248 days	1122.5
TCGA-ZP-A9D1-01A	56 years, female, white, stage:'--, alive, 21 days	1119.9
TCGA-UB-A7MB-01A	24 years, male, white, stage:Stage II, alive, 601 days	1116.3
TCGA-GJ-A9DB-01A	68 years, male, white, stage:Stage I, dead, 67 days	1114.8
TCGA-DD-A4NR-01A	85 years, female, white, stage:Stage I, dead, 9 days	1113.6
TCGA-BC-A10X-01A	52 years, female, white, stage:Stage IIIA, dead, 770 days	1112.7
TCGA-DD-AACX-01A	66 years, male, asian, stage:Stage II, alive, 170 days	1100.7
TCGA-MI-A75E-01A	61 years, male, white, stage:Stage IIIC, alive, 507 days	1073.9
TCGA-ED-A8O5-01A	59 years, female, asian, stage:Stage IIIA, alive, 406 days	1068.8
TCGA-DD-AAD6-01A	66 years, male, asian, stage:Stage IIIA, alive, 672 days	1059.6
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:Stage II, alive, 94 days	1047.4
TCGA-XR-A8TC-01A	43 years, female, white, stage:Stage I, alive, 1339 days	1025.5
TCGA-DD-A39W-01A	29 years, female, white, stage:Stage III, dead, 827 days	1015.3
TCGA-2Y-A9GW-01A	64 years, male, white, stage:Stage I, dead, 1271 days	1013.4
TCGA-DD-A1EI-01A	46 years, male, asian, stage:Stage I, alive, 183 days	1010.6
TCGA-DD-A73F-01A	77 years, female, white, stage:Stage I, alive, 1085 days	994.6
TCGA-UB-A7MA-01A	62 years, female, white, stage:Stage II, alive, 848 days	991.6
TCGA-DD-AAW0-01A	54 years, male, asian, stage:Stage I, alive, 2015 days	986.9
TCGA-CC-A3MB-01A	36 years, male, asian, stage:Stage IIIA, dead, 315 days	979.9
TCGA-ED-A4XI-01A	58 years, male, asian, stage:Stage II, alive, 819 days	978.0
TCGA-ZP-A9CY-01A	66 years, female, white, stage:'--, alive, 782 days	972.5
TCGA-DD-AAEE-01A	55 years, male, asian, stage:Stage I, alive, 810 days	969.6
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:Stage II, dead, 848 days	962.3
TCGA-2Y-A9H5-01A	59 years, female, white, stage:Stage I, dead, 555 days	959.9
TCGA-CC-5261-01A	44 years, male, asian, stage:Stage II, dead, 97 days	952.8
TCGA-WX-AA44-01A	64 years, female, white, stage:Stage I, alive, 615 days	952.7
TCGA-DD-A4NF-01A	72 years, male, white, stage:Stage I, alive, 942 days	948.5
TCGA-2Y-A9H0-01A	49 years, male, white, stage:Stage IIIA, alive, 3675 days	940.6
TCGA-2Y-A9GT-01A	51 years, male, white, stage:Stage I, dead, 1624 days	932.6
TCGA-DD-AACP-01A	64 years, male, asian, stage:Stage I, alive, 415 days	927.6
TCGA-PD-A5DF-01A	58 years, female, white, stage:Stage IIIB, dead, 639 days	917.5
TCGA-DD-A11B-01A	73 years, male, white, stage:Stage I, dead, 14 days	914.9
TCGA-2Y-A9H7-01A	81 years, female, white, stage:Stage I, alive, 1168 days	913.1
TCGA-DD-AACV-01A	53 years, male, asian, stage:Stage I, alive, 1531 days	908.5
TCGA-XR-A8TE-01A	16 years, male, white, stage:Stage IIIA, alive, 925 days	907.4
TCGA-DD-AADW-01A	48 years, male, asian, stage:Stage I, alive, 587 days	905.1
TCGA-ED-A66X-01A	35 years, male, asian, stage:Stage IIIA, alive, 406 days	901.2
TCGA-DD-AACS-01A	39 years, male, asian, stage:Stage I, alive, 1804 days	898.3
TCGA-DD-A4NG-01A	77 years, male, white, stage:Stage IIIA, dead, 802 days	898.0
TCGA-2Y-A9HB-01A	66 years, male, stage:Stage I, alive, 260 days	894.8
TCGA-ZP-A9CV-01A	59 years, male, white, stage:'--, dead, 1088 days	889.3
TCGA-DD-A1EE-01A	73 years, male, white, stage:Stage IIIA, dead, 349 days	878.0
TCGA-G3-A3CK-01A	61 years, male, asian, stage:Stage I, alive, 585 days	876.4
TCGA-DD-AAW1-01A	55 years, male, asian, stage:Stage IIIA, alive, 1989 days	873.7
TCGA-DD-AADB-01A	51 years, male, asian, stage:Stage I, alive, 1242 days	863.4
TCGA-DD-A4NS-01A	61 years, female, white, stage:Stage I, dead, 2456 days	860.0
TCGA-DD-AACU-01A	59 years, male, asian, stage:Stage I, alive, 1567 days	858.6
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:Stage I, alive, 519 days	857.2
TCGA-ED-A97K-01A	54 years, male, asian, stage:Stage IIIA, alive, 6 days	853.6
TCGA-DD-AACQ-01A	50 years, male, asian, stage:Stage II, dead, 432 days	847.7
TCGA-DD-AADL-01A	58 years, male, asian, stage:Stage I, alive, 636 days	845.4
TCGA-CC-A5UD-01A	45 years, male, asian, stage:Stage IIIA, dead, 304 days	843.5
TCGA-DD-AAC8-01A	72 years, male, asian, stage:Stage I, dead, 16 days	842.9
TCGA-CC-5262-01A	67 years, male, asian, stage:Stage IIIC, dead, 103 days	835.7
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:Stage II, dead, 415 days	829.8
TCGA-ZS-A9CF-01A	64 years, male, white, stage:Stage II, alive, 2412 days	826.5
TCGA-BC-A10Z-01A	62 years, female, white, stage:Stage I, dead, 34 days	821.7
TCGA-G3-A25V-01A	68 years, male, white, stage:Stage I, alive, 860 days	816.6
TCGA-G3-A25U-01A	63 years, female, asian, stage:Stage I, alive, 1636 days	815.8
TCGA-CC-A3MA-01A	61 years, male, asian, stage:Stage IIIA, dead, 303 days	813.5
TCGA-DD-A4NI-01A	67 years, male, white, stage:Stage II, alive, 816 days	804.9
TCGA-DD-AACA-01A	65 years, male, asian, stage:Stage I, alive, 2301 days	804.4
TCGA-G3-A7M9-01A	70 years, male, white, stage:Stage IIIB, dead, 56 days	804.0
TCGA-2Y-A9H6-01A	68 years, female, white, stage:Stage I, alive, 357 days	803.6
TCGA-WX-AA46-01A	61 years, male, white, stage:Stage II, alive, 756 days	797.3
TCGA-BC-A10U-01A	69 years, male, white, stage:'--, dead, 837 days	795.0
TCGA-4R-AA8I-01A	66 years, male, white, stage:Stage II, dead, 262 days	793.2
TCGA-DD-AAE7-01A	72 years, male, asian, stage:Stage I, alive, 644 days	787.6
TCGA-EP-A3RK-01A	73 years, male, white, stage:Stage IIIA, alive, 363 days	786.7
TCGA-DD-A4NB-01A	25 years, male, white, stage:Stage I, alive, 989 days	786.4
TCGA-DD-A4NL-01A	46 years, male, white, stage:Stage I, alive, 1711 days	776.3
TCGA-G3-AAV2-01A	50 years, male, white, stage:Stage I, alive, 372 days	769.9
TCGA-DD-A1EH-01A	23 years, male, white, stage:Stage III, alive, 1495 days	753.3
TCGA-FV-A2QR-01A	75 years, male, white, stage:Stage I, dead, 581 days	746.2
TCGA-2Y-A9HA-01A	70 years, male, white, stage:Stage II, dead, 36 days	741.5
TCGA-DD-A4NH-01A	65 years, female, white, stage:Stage IIIB, alive, 917 days	739.7
TCGA-DD-AACY-01A	61 years, male, asian, stage:Stage I, alive, 1450 days	737.1
TCGA-ED-A66Y-01A	51 years, female, asian, stage:Stage IIIA, dead, 296 days	736.0
TCGA-DD-AAW2-01A	69 years, male, asian, stage:Stage I, alive, 1855 days	736.0
TCGA-DD-AADD-01A	51 years, male, asian, stage:Stage I, alive, 1231 days	733.1
TCGA-CC-A5UE-01A	48 years, male, asian, stage:Stage IIIB, dead, 272 days	727.7
TCGA-DD-A4NK-01A	80 years, female, white, stage:Stage IIIA, dead, 1210 days	719.7
TCGA-BC-A10Q-01A	72 years, female, white, stage:'--, dead, 1135 days	711.8
TCGA-HP-A5MZ-01A	78 years, male, stage:Stage I, dead, 91 days	707.9
TCGA-DD-A4NE-01A	75 years, female, white, stage:Stage IIIA, dead, 660 days	702.9
TCGA-UB-AA0V-01A	69 years, female, white, stage:Stage I, alive, 314 days	702.1
TCGA-ED-A627-01A	74 years, male, white, stage:Stage I, alive, 423 days	696.4
TCGA-2Y-A9GV-01A	54 years, female, white, stage:Stage I, dead, 2532 days	693.1
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:Stage II, alive, 382 days	691.2
TCGA-DD-A1EJ-01A	71 years, female, white, stage:Stage IIIC, dead, 1005 days	690.6
TCGA-GJ-A3OU-01A	59 years, male, white, stage:Stage I, alive, 879 days	690.2
TCGA-G3-A5SL-01A	70 years, male, white, stage:Stage II, alive, 621 days	684.8
TCGA-2Y-A9H9-01A	70 years, male, white, stage:Stage I, alive, 697 days	683.8
TCGA-5R-AAAM-01A	65 years, female, white, stage:Stage II, dead, 46 days	682.7
TCGA-DD-AAEG-01A	59 years, female, asian, stage:Stage I, alive, 719 days	681.9
TCGA-CC-A8HT-01A	74 years, male, asian, stage:Stage IIIA, dead, 140 days	677.7
TCGA-DD-AAVY-01A	56 years, male, asian, stage:Stage IIIA, alive, 1970 days	677.5
TCGA-G3-A6UC-01A	65 years, male, white, stage:Stage IIIB, alive, 671 days	672.3
TCGA-T1-A6J8-01A	68 years, male, white, stage:'--, alive, 23 days	670.8
TCGA-G3-AAV3-01A	58 years, female, white, stage:Stage II, alive, 412 days	669.3
TCGA-BC-A10T-01A	76 years, male, white, stage:'--, dead, 837 days	666.6
TCGA-G3-A3CG-01A	80 years, male, white, stage:Stage I, alive, 673 days	664.1
TCGA-CC-5260-01A	61 years, female, asian, stage:Stage IIIC, dead, 87 days	663.4
TCGA-HP-A5N0-01A	90 years, female, stage:'--, dead, 752 days	662.5
TCGA-DD-A1EK-01A	64 years, female, white, stage:Stage IVB, dead, 558 days	652.8
TCGA-ZS-A9CG-01A	55 years, male, white, stage:Stage II, alive, 341 days	649.0
TCGA-DD-A3A1-01A	65 years, male, stage:Stage IIIA, dead, 233 days	645.9
TCGA-G3-A25Z-01A	58 years, male, asian, stage:Stage I, alive, 655 days	645.9
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:Stage I, alive, 1452 days	645.2
TCGA-BD-A3EP-01A	75 years, female, black or african american, stage:Stage I, alive, 409 days	643.2
TCGA-DD-AADR-01A	58 years, male, asian, stage:Stage I, alive, 2028 days	639.0
TCGA-G3-A25Y-01A	52 years, female, asian, stage:Stage I, dead, 452 days	638.4
TCGA-DD-AAW3-01A	69 years, male, asian, stage:Stage I, alive, 1633 days	624.0
TCGA-DD-AAE1-01A	52 years, male, asian, stage:Stage I, alive, 552 days	620.0
TCGA-NI-A8LF-01A	74 years, male, white, stage:Stage I, alive, 799 days	619.4
TCGA-ED-A8O6-01A	50 years, female, asian, stage:Stage IIIA, dead, 56 days	615.5
TCGA-EP-A26S-01A	70 years, male, white, stage:Stage I, alive, 608 days	614.6
TCGA-ZP-A9D4-01A	64 years, female, white, stage:'--, alive, 395 days	613.9
TCGA-5C-A9VG-01A	58 years, male, white, stage:Stage II, alive, 328 days	611.7
TCGA-DD-A4NJ-01A	54 years, female, white, stage:Stage II, alive, 928 days	603.2
TCGA-DD-A4NN-01A	56 years, female, white, stage:Stage I, dead, 899 days	601.8
TCGA-G3-A3CH-01A	53 years, male, asian, stage:Stage IIIA, alive, 780 days	601.6
TCGA-G3-AAV7-01A	38 years, male, asian, stage:Stage II, alive, 361 days	592.4
TCGA-DD-AADG-01A	70 years, male, asian, stage:Stage IIIA, alive, 1145 days	590.4
TCGA-ZS-A9CD-01A	73 years, male, white, stage:Stage II, dead, 1386 days	573.6
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:Stage IIIB, alive, 396 days	573.4
TCGA-DD-A73B-01A	72 years, female, white, stage:Stage I, dead, 283 days	569.8
TCGA-RC-A7SK-01A	59 years, male, asian, stage:Stage I, alive, 472 days	569.6
TCGA-DD-AACW-01A	43 years, male, asian, stage:Stage I, alive, 1424 days	565.4
TCGA-DD-AAE2-01A	51 years, male, asian, stage:Stage I, alive, 638 days	553.6
TCGA-O8-A75V-01A	54 years, male, stage:Stage I, alive, 538 days	552.0
TCGA-ED-A459-01A	47 years, male, asian, stage:Stage II, alive, 910 days	542.8
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:Stage I, dead, 19 days	540.9
TCGA-ED-A5KG-01A	60 years, female, asian, stage:Stage II, alive, 854 days	539.8
TCGA-XR-A8TD-01A	49 years, female, white, stage:Stage IIIB, alive, 1030 days	537.2
TCGA-DD-A3A8-01A	75 years, male, white, stage:Stage II, dead, 11 days	536.2
TCGA-BC-A10S-01A	81 years, male, white, stage:'--, dead, 1423 days	532.9
TCGA-DD-A4NV-01A	61 years, male, white, stage:Stage IIIA, alive, 2398 days	527.6
TCGA-G3-A5SK-01A	58 years, male, white, stage:Stage I, alive, 744 days	527.5
TCGA-ZS-A9CE-01A	79 years, female, white, stage:Stage II, alive, 1241 days	521.2
TCGA-G3-A7M6-01A	60 years, female, white, stage:Stage I, alive, 632 days	518.1
TCGA-BC-A216-01A	62 years, female, white, stage:Stage IIIA, alive, 1351 days	510.5
TCGA-BC-A3KF-01A	66 years, female, white, stage:Stage I, alive, 8 days	501.4
TCGA-CC-A7IH-01A	58 years, male, asian, stage:Stage IIIA, alive, 365 days	501.1
TCGA-DD-AADU-01A	60 years, male, asian, stage:Stage II, alive, 554 days	497.7
TCGA-BC-A3KG-01A	68 years, female, white, stage:Stage II, alive, 680 days	489.5
TCGA-CC-A7IE-01A	57 years, male, asian, stage:Stage IIIA, dead, 217 days	488.6
TCGA-CC-A1HT-01A	50 years, male, asian, stage:Stage IIIA, dead, 101 days	483.1
TCGA-DD-AAVX-01A	38 years, male, asian, stage:Stage II, alive, 1718 days	477.8
TCGA-MI-A75G-01A	63 years, male, white, stage:Stage II, alive, 698 days	474.7
TCGA-K7-A5RF-01A	64 years, male, white, stage:Stage I, alive, 631 days	473.1
TCGA-RC-A6M4-01A	74 years, female, white, stage:Stage IIIA, alive, 22 days	471.3
TCGA-CC-A3M9-01A	45 years, male, asian, stage:Stage IIIA, dead, 300 days	470.6
TCGA-2Y-A9GY-01A	64 years, female, white, stage:Stage II, dead, 757 days	466.8
TCGA-CC-A9FS-01A	55 years, male, asian, stage:Stage II, alive, 211 days	464.3
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:Stage II, alive, 1098 days	463.9
TCGA-MI-A75I-01A	61 years, male, black or african american, stage:'--, alive, 630 days	463.3
TCGA-CC-A5UC-01A	63 years, male, asian, stage:Stage IIIA, dead, 347 days	462.6
TCGA-2Y-A9GU-01A	55 years, female, white, stage:Stage I, alive, 1939 days	459.6
TCGA-UB-A7ME-01A	51 years, male, asian, stage:Stage I, alive, 486 days	451.0
TCGA-DD-A1EC-01A	20 years, female, white, stage:Stage I, alive, 602 days	450.3
TCGA-FV-A2QQ-01A	80 years, male, white, stage:Stage I, alive, 729 days	449.0
TCGA-DD-A73C-01A	65 years, female, white, stage:Stage IIIA, alive, 701 days	448.9
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:Stage IIIA, alive, 20 days	446.9
TCGA-DD-AADC-01A	53 years, male, asian, stage:Stage I, dead, 425 days	446.1
TCGA-DD-A1ED-01A	68 years, male, white, stage:Stage I, alive, 2301 days	433.3
TCGA-ED-A7PX-01A	48 years, female, asian, stage:Stage II, alive, 6 days	433.2
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:Stage I, alive, 12 days	432.1
TCGA-G3-A7M5-01A	76 years, male, asian, stage:Stage I, alive, 447 days	431.0
TCGA-RC-A6M5-01A	20 years, female, white, stage:Stage IVA, alive, 15 days	424.8
TCGA-G3-A5SM-01A	58 years, male, white, stage:Stage II, alive, 520 days	418.9
TCGA-DD-A39Y-01A	67 years, male, asian, stage:Stage I, dead, 171 days	414.1
TCGA-DD-AACF-01A	68 years, male, asian, stage:Stage I, dead, 365 days	400.0
TCGA-UB-A7MF-01A	56 years, male, white, stage:Stage IIIA, dead, 214 days	399.0
TCGA-DD-AADA-01A	66 years, female, asian, stage:Stage I, alive, 1233 days	397.6
TCGA-DD-A3A4-01A	37 years, male, white, stage:Stage IIIA, dead, 612 days	395.9
TCGA-DD-A113-01A	55 years, female, white, stage:Stage II, alive, 2425 days	394.0
TCGA-DD-A1EF-01A	57 years, female, white, stage:Stage I, dead, 394 days	392.5
TCGA-FV-A496-01A	84 years, female, white, stage:Stage I, alive, 10 days	385.3
TCGA-LG-A9QD-01A	68 years, male, white, stage:Stage IIIA, alive, 366 days	385.0
TCGA-DD-AAC9-01A	51 years, male, asian, stage:Stage I, alive, 347 days	384.5
TCGA-DD-AADK-01A	68 years, female, asian, stage:Stage II, alive, 1049 days	382.9
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:Stage I, alive, 2728 days	382.4
TCGA-G3-A7M8-01A	31 years, male, asian, stage:Stage I, alive, 430 days	381.0
TCGA-DD-AAD5-01A	54 years, male, asian, stage:Stage I, alive, 1345 days	380.3
TCGA-G3-AAV5-01A	67 years, male, white, stage:Stage II, alive, 354 days	378.3
TCGA-XR-A8TF-01A	74 years, male, white, stage:Stage I, dead, 693 days	367.4
TCGA-DD-AAVR-01A	44 years, male, asian, stage:Stage I, alive, 2513 days	365.8
TCGA-DD-AACN-01A	32 years, male, asian, stage:Stage I, alive, 1302 days	365.5
TCGA-MR-A8JO-01A	34 years, male, white, stage:Stage I, alive, 330 days	360.4
TCGA-RC-A7S9-01A	47 years, female, asian, stage:Stage I, alive, 640 days	360.0
TCGA-BD-A2L6-01A	69 years, male, white, stage:'--, alive, 1363 days	356.7
TCGA-5C-AAPD-01A	61 years, male, asian, stage:Stage II, alive, 20 days	356.2
TCGA-BC-A10Y-01A	76 years, male, white, stage:'--, dead, 711 days	355.9
TCGA-DD-AAVP-01A	48 years, male, asian, stage:Stage I, alive, 2752 days	352.1
TCGA-DD-AAVV-01A	56 years, male, asian, stage:Stage II, alive, 2455 days	348.8
TCGA-BC-A69I-01A	69 years, male, white, stage:Stage I, alive, 387 days	348.7
TCGA-EP-A2KB-01A	46 years, female, white, stage:Stage I, dead, 596 days	347.1
TCGA-DD-A3A9-01A	64 years, female, white, stage:Stage IVB, dead, 931 days	341.3
TCGA-DD-A4NA-01A	67 years, female, white, stage:Stage IIIC, alive, 1008 days	337.3
TCGA-DD-AACT-01A	69 years, female, asian, stage:Stage I, alive, 1562 days	333.9
TCGA-LG-A9QC-01A	48 years, male, white, stage:Stage I, alive, 425 days	331.2
TCGA-CC-A8HS-01A	18 years, male, asian, stage:Stage IIIC, dead, 300 days	329.4
TCGA-5R-AA1C-01A	57 years, male, white, stage:Stage II, alive, 520 days	328.8
TCGA-DD-AACC-01A	61 years, male, asian, stage:Stage I, dead, 1685 days	327.9
TCGA-G3-AAV6-01A	53 years, female, white, stage:Stage IIIA, dead, 65 days	323.4
TCGA-DD-A73D-01A	68 years, female, white, stage:Stage II, alive, 693 days	323.3
TCGA-DD-AAD8-01A	73 years, female, asian, stage:Stage I, alive, 1219 days	314.1
TCGA-K7-A6G5-01A	66 years, male, white, stage:Stage I, alive, 512 days	313.8
TCGA-ED-A7XO-01A	29 years, male, asian, stage:Stage IIIA, alive, 427 days	311.4
TCGA-CC-A7IL-01A	61 years, male, asian, stage:Stage IIIA, dead, 278 days	308.8
TCGA-BC-A5W4-01A	69 years, male, white, stage:Stage IIIA, dead, 547 days	305.7
TCGA-G3-A5SI-01A	44 years, male, asian, stage:Stage II, dead, 768 days	301.1
TCGA-EP-A2KA-01A	52 years, female, white, stage:Stage IIIA, dead, 627 days	299.0
TCGA-MI-A75C-01A	64 years, male, white, stage:Stage I, alive, 291 days	294.3
TCGA-5R-AA1D-01A	17 years, female, white, stage:Stage IIIA, alive, 449 days	293.7
TCGA-DD-A39X-01A	78 years, female, white, stage:Stage I, dead, 1694 days	293.2
TCGA-MR-A520-01A	58 years, male, white, stage:Stage I, alive, 229 days	290.0
TCGA-BC-A217-01A	75 years, female, white, stage:Stage II, dead, 1397 days	289.1
TCGA-G3-AAV4-01A	83 years, female, white, stage:Stage I, dead, 27 days	280.7
TCGA-BC-A110-01A	51 years, female, black or african american, stage:'--, dead, 2116 days	272.2
TCGA-DD-A3A5-01A	66 years, female, white, stage:Stage III, dead, 3125 days	260.1
TCGA-EP-A3JL-01A	76 years, male, white, stage:Stage I, alive, 303 days	251.0
TCGA-ED-A82E-01A	60 years, female, asian, stage:Stage IIIA, alive, 408 days	246.5
TCGA-FV-A3I0-01A	76 years, female, white, stage:Stage II, alive, 848 days	243.7
TCGA-DD-AADM-01A	58 years, male, asian, stage:Stage II, dead, 12 days	242.6
TCGA-DD-AA3A-01A	81 years, female, white, stage:Stage I, dead, 410 days	242.2
TCGA-RC-A7SB-01A	53 years, male, asian, stage:Stage II, alive, 588 days	242.0
TCGA-MI-A75H-01A	77 years, male, white, stage:'--, alive, 747 days	241.3
TCGA-DD-A4NP-01A	32 years, male, white, stage:Stage I, alive, 3308 days	241.2
TCGA-CC-A7IF-01A	59 years, male, asian, stage:Stage IIIA, dead, 649 days	239.4
TCGA-2Y-A9H8-01A	85 years, female, white, stage:'--, dead, 633 days	232.5
TCGA-G3-A7M7-01A	65 years, male, white, stage:Stage I, alive, 361 days	229.5
TCGA-KR-A7K8-01A	57 years, male, stage:Stage I, alive, 906 days	226.6
TCGA-DD-AACJ-01A	75 years, male, asian, stage:Stage II, alive, 2102 days	219.6
TCGA-DD-AAE9-01A	69 years, male, asian, stage:Stage I, alive, 722 days	216.0
TCGA-DD-A3A3-01A	45 years, male, asian, stage:Stage I, dead, 535 days	207.9
TCGA-DD-AADJ-01A	70 years, female, asian, stage:Stage I, alive, 1066 days	206.9
TCGA-CC-A8HV-01A	51 years, female, asian, stage:Stage II, dead, 279 days	203.9
TCGA-CC-A8HU-01A	39 years, female, asian, stage:Stage IIIA, dead, 344 days	203.6
TCGA-G3-A25T-01A	45 years, female, white, stage:Stage IIIA, alive, 1553 days	198.4
TCGA-DD-AAEH-01A	73 years, male, asian, stage:Stage I, alive, 784 days	192.3
TCGA-DD-AACL-01A	66 years, female, asian, stage:Stage I, dead, 107 days	186.4
TCGA-DD-A116-01A	68 years, male, asian, stage:Stage IIIA, dead, 1622 days	184.7
TCGA-DD-AAE6-01A	59 years, female, asian, stage:Stage I, alive, 141 days	181.0
TCGA-2Y-A9H2-01A	64 years, female, white, stage:Stage I, alive, 1731 days	181.0
TCGA-NI-A4U2-01A	71 years, male, white, stage:Stage IIIA, dead, 1791 days	176.6
TCGA-KR-A7K7-01A	61 years, female, white, stage:Stage II, alive, 951 days	172.4
TCGA-ED-A7PY-01A	20 years, female, asian, stage:Stage II, alive, 390 days	167.5
TCGA-KR-A7K2-01A	64 years, male, white, stage:Stage I, alive, 829 days	164.1
TCGA-G3-A25X-01A	73 years, male, asian, stage:Stage II, alive, 1779 days	163.4
TCGA-DD-AAVU-01A	46 years, male, asian, stage:Stage II, alive, 2202 days	157.9
TCGA-DD-AADF-01A	64 years, female, asian, stage:Stage I, dead, 115 days	150.4
TCGA-DD-A1EB-01A	72 years, female, stage:Stage I, alive, 2017 days	149.3
TCGA-DD-AACB-01A	74 years, female, asian, stage:Stage I, alive, 2324 days	148.6
TCGA-DD-AADQ-01A	59 years, male, asian, stage:Stage II, alive, 436 days	148.3
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:Stage I, dead, 438 days	128.7
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:Stage II, alive, 6 days	118.2
TCGA-G3-A3CI-01A	71 years, male, white, stage:Stage I, alive, 180 days	117.7
TCGA-CC-A7II-01A	54 years, male, asian, stage:Stage IIIA, alive, 399 days	116.6
TCGA-DD-AACE-01A	62 years, male, asian, stage:Stage I, alive, 2184 days	112.6
TCGA-DD-AAE3-01A	50 years, male, asian, stage:Stage I, alive, 566 days	110.7
TCGA-WJ-A86L-01A	68 years, female, white, stage:Stage I, alive, 345 days	109.7
TCGA-DD-AAEA-01A	65 years, male, asian, stage:Stage I, alive, 575 days	103.9
TCGA-DD-A3A2-01A	76 years, female, white, stage:Stage I, dead, 2131 days	90.0
TCGA-G3-AAUZ-01A	48 years, male, stage:Stage I, alive, 480 days	87.4
TCGA-DD-A39Z-01A	43 years, female, stage:Stage II, dead, 601 days	82.0
TCGA-DD-AAE0-01A	45 years, female, asian, stage:Stage IIIA, alive, 555 days	76.3
TCGA-DD-AADI-01A	43 years, female, asian, stage:Stage I, alive, 1085 days	75.3
TCGA-G3-AAV0-01A	58 years, male, asian, stage:Stage I, alive, 476 days	74.5
TCGA-DD-AAED-01A	51 years, male, asian, stage:Stage I, alive, 763 days	74.2
TCGA-BC-A69H-01A	64 years, male, white, stage:Stage II, alive, 444 days	72.5
TCGA-WQ-AB4B-01A	62 years, male, white, stage:Stage II, alive, 395 days	68.2
TCGA-G3-A25S-01A	64 years, male, white, stage:Stage I, dead, 416 days	60.6
TCGA-2Y-A9H3-01A	45 years, male, white, stage:Stage II, alive, 1516 days	60.3
TCGA-FV-A495-01A	51 years, female, white, stage:Stage II, alive, 1 days	59.2
TCGA-WQ-A9G7-01A	71 years, female, white, stage:'--, alive, 30 days	57.3
TCGA-CC-A7IG-01A	47 years, male, asian, stage:Stage II, dead, 299 days	56.3
TCGA-DD-A119-01A	40 years, male, asian, stage:Stage IV, dead, 223 days	54.3
TCGA-DD-A39V-01A	77 years, male, white, stage:Stage II, dead, 643 days	49.7
TCGA-RC-A7SH-01A	42 years, male, asian, stage:Stage II, alive, 468 days	42.7
TCGA-2Y-A9H1-01A	58 years, male, white, stage:Stage I, dead, 1229 days	37.6
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	32.4
TCGA-DD-AACI-01A	69 years, male, asian, stage:Stage II, alive, 1618 days	27.7
TCGA-ES-A2HS-01A	80 years, male, white, stage:Stage I, dead, 688 days	25.9
TCGA-DD-AAE4-01A	49 years, female, asian, stage:Stage I, alive, 608 days	25.2
TCGA-DD-A3A6-01A	72 years, female, white, stage:Stage II, dead, 3258 days	23.7
TCGA-WX-AA47-01A	33 years, female, white, stage:Stage IIIA, dead, 556 days	22.7
TCGA-DD-AAEB-01A	60 years, male, asian, stage:Stage I, alive, 478 days	21.7
TCGA-CC-5259-01A	60 years, female, asian, stage:Stage IIIC, alive, 250 days	21.6
TCGA-DD-AACO-01A	40 years, male, asian, stage:Stage I, alive, 1876 days	20.3
TCGA-DD-A3A7-01A	67 years, male, stage:Stage IIIB, dead, 419 days	19.0
TCGA-DD-A73G-01A	73 years, female, white, stage:Stage I, alive, 3478 days	16.8
TCGA-DD-AACG-01A	52 years, male, asian, stage:Stage II, dead, 469 days	16.7
TCGA-DD-AACD-01A	48 years, male, asian, stage:Stage I, dead, 381 days	16.5
TCGA-CC-A123-01A	24 years, female, asian, stage:Stage IIIA, alive, 219 days	14.7
TCGA-DD-AADN-01A	59 years, male, asian, stage:Stage I, alive, 898 days	14.1
TCGA-DD-AADO-01A	55 years, male, asian, stage:Stage I, alive, 453 days	12.7
TCGA-FV-A4ZP-01A	78 years, male, white, stage:Stage IIIA, dead, 2486 days	11.1
TCGA-DD-AADS-01A	63 years, male, asian, stage:Stage I, alive, 474 days	7.4
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ

& Survival analysisⁱ

FN1 is not prognostic in Liver Hepatocellular Carcinoma (validation)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 904.52

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

730.9

Number of samples

231

Samples

Sample	Description	TPM
DO48761	55 years, male, NA, stage:2, alive, 870 days	2968.4
DO23509	60 years, male, NA, stage:3, dead, 780 days	2817.6
DO45251	57 years, female, NA, stage:2, alive, 900 days	2648.9
DO45169	74 years, male, NA, stage:3, alive, 1350 days	2101.7
DO23511	83 years, female, NA, stage:3, dead, 180 days	1966.5
DO45113	58 years, male, NA, stage:3, alive, 1560 days	1907.1
DO23539	77 years, male, NA, stage:1, alive, 1110 days	1878.5
DO48742	76 years, male, NA, stage:2, alive, 600 days	1807.5
DO45157	62 years, male, NA, stage:2, alive, 1980 days	1763.4
DO23529	72 years, male, NA, stage:4, alive, 930 days	1751.3
DO23510	80 years, female, NA, stage:2, alive, 870 days	1654.6
DO45096	69 years, male, NA, stage:2, dead, 1290 days	1627.4
DO45167	67 years, male, NA, stage:2, dead, 1440 days	1625.7
DO45155	69 years, male, NA, stage:2, alive, 2160 days	1594.3
DO23540	73 years, male, NA, stage:1, alive, 750 days	1572.7
DO45235	68 years, female, NA, stage:1, alive, 900 days	1568.4
DO48751	68 years, male, NA, stage:2, dead, 480 days	1527.6
DO48732	73 years, male, NA, stage:3, alive, 630 days	1521.1
DO50778	60 years, male, NA, stage:4, alive, 630 days	1513.9
DO45269	59 years, male, NA, stage:3, alive, 750 days	1501.7
DO50859	77 years, male, NA, stage:2, alive, 180 days	1473.5
DO48728	74 years, female, NA, stage:2, alive, 150 days	1403.2
DO45117	73 years, female, NA, stage:2, dead, 1110 days	1383.6
DO45239	42 years, male, NA, stage:2, alive, 870 days	1348.5
DO48723	73 years, male, NA, stage:1, alive, 600 days	1343.1
DO50822	66 years, male, NA, stage:2, alive, 510 days	1327.0
DO50793	76 years, male, NA, stage:4, alive, 540 days	1318.7
DO50857	72 years, male, NA, stage:2, alive, 210 days	1314.9
DO45123	78 years, female, NA, stage:2, dead, 570 days	1284.9
DO45237	58 years, male, NA, stage:2, alive, 900 days	1284.6
DO45092	62 years, male, NA, stage:4, dead, 1200 days	1237.9
DO45175	74 years, male, NA, stage:2, alive, 1140 days	1230.2
DO23542	66 years, male, NA, stage:3, alive, 960 days	1227.7
DO45129	61 years, male, NA, stage:3, alive, 1470 days	1216.6
DO45139	63 years, male, NA, stage:3, alive, 1320 days	1210.4
DO45231	84 years, male, NA, stage:2, alive, 930 days	1190.4
DO50855	47 years, male, NA, stage:2, alive, 570 days	1169.1
DO45137	38 years, male, NA, stage:1, alive, 1320 days	1127.6
DO50800	74 years, male, NA, stage:2, alive, 510 days	1121.0
DO45145	78 years, male, NA, stage:3, dead, 60 days	1117.5
DO45205	67 years, female, NA, stage:2, dead, 90 days	1112.4
DO45091	56 years, male, NA, stage:2, dead, 1320 days	1096.6
DO48743	69 years, female, NA, stage:2, alive, 570 days	1077.6
DO23536	56 years, male, NA, stage:2, alive, 930 days	1056.7
DO45225	69 years, male, NA, stage:1, alive, 1050 days	1053.1
DO50850	74 years, male, NA, stage:3, alive, 720 days	1050.5
DO45233	83 years, male, NA, stage:3, alive, 900 days	1029.9
DO48757	68 years, female, NA, stage:3, alive, 480 days	1029.6
DO48727	81 years, female, NA, stage:2, dead, 390 days	1021.8
DO45221	75 years, female, NA, stage:4, dead, 390 days	1012.8
DO45094	76 years, male, NA, stage:3, alive, 1650 days	997.0
DO50844	75 years, male, NA, stage:4, alive, 300 days	994.4
DO50789	73 years, female, NA, stage:2, alive, 570 days	978.9
DO48681	57 years, male, NA, stage:2, alive, 900 days	968.7
DO45093	71 years, male, NA, stage:2, dead, 720 days	947.5
DO23521	63 years, male, NA, stage:3, alive, 1110 days	939.1
DO50832	73 years, male, NA, stage:3, alive, 90 days	938.9
DO45133	64 years, male, NA, stage:3, dead, 660 days	932.4
DO45165	75 years, male, NA, stage:2, alive, 690 days	931.3
DO45177	81 years, female, NA, stage:3, alive, 1260 days	931.1
DO23549	74 years, male, NA, stage:3, alive, 990 days	928.1
DO45207	68 years, male, NA, stage:1, alive, 1050 days	907.1
DO45263	67 years, male, NA, stage:3, dead, 270 days	905.5
DO45115	81 years, male, NA, stage:2, alive, 840 days	903.5
DO50804	81 years, male, NA, stage:2, alive, 720 days	896.6
DO48720	62 years, female, NA, stage:2, alive, 570 days	893.8
DO45187	32 years, female, NA, stage:1, alive, 1260 days	879.9
DO45247	31 years, female, NA, stage:2, alive, 210 days	879.6
DO50840	49 years, male, NA, stage:2, alive, 330 days	878.8
DO45213	58 years, male, NA, stage:1, alive, 1200 days	878.6
DO45111	74 years, male, NA, stage:2, alive, 1590 days	869.6
DO50807	67 years, male, NA, stage:1, alive, 540 days	846.5
DO45223	67 years, male, NA, stage:4, alive, 1020 days	844.7
DO23537	79 years, male, NA, stage:2, dead, 900 days	833.9
DO23515	71 years, male, NA, stage:2, alive, 1230 days	825.8
DO45183	72 years, female, NA, stage:2, dead, 570 days	820.9
DO45143	69 years, male, NA, stage:3, alive, 1290 days	819.4
DO45099	46 years, male, NA, stage:3, alive, 1590 days	816.4
DO50774	68 years, female, NA, stage:2, alive, 720 days	807.7
DO23513	76 years, male, NA, stage:3, alive, 1200 days	793.6
DO45191	61 years, female, NA, stage:2, alive, 1200 days	784.9
DO45197	51 years, male, NA, stage:2, alive, 1170 days	781.7
DO50820	77 years, female, NA, stage:3, alive, 510 days	772.8
DO50787	63 years, male, NA, stage:3, alive, 480 days	765.3
DO45275	65 years, male, NA, stage:3, dead, 10 days	757.2
DO45227	57 years, female, NA, stage:2, alive, 1020 days	756.5
DO45135	77 years, male, NA, stage:1, alive, 1410 days	754.5
DO23527	72 years, male, NA, stage:1, alive, 1050 days	753.5
DO48697	64 years, female, NA, stage:2, dead, 810 days	751.7
DO45261	74 years, male, NA, stage:3, alive, 990 days	751.7
DO48712	50 years, male, NA, stage:2, alive, 810 days	747.0
DO45281	83 years, male, NA, stage:4, alive, 750 days	737.3
DO45297	61 years, female, NA, stage:4, dead, 1260 days	728.9
DO23538	67 years, male, NA, stage:2, alive, 450 days	722.2
DO23535	67 years, male, NA, stage:1, alive, 960 days	721.3
DO48679	72 years, male, NA, stage:2, alive, 1200 days	713.3
DO48672	81 years, male, NA, stage:2, alive, 450 days	710.6
DO23552	80 years, female, NA, stage:1, alive, 810 days	686.7
DO23514	64 years, male, NA, stage:2, alive, 1290 days	673.6
DO48717	54 years, male, NA, stage:4, dead, 180 days	665.1
DO45121	61 years, male, NA, stage:3, alive, 1530 days	660.1
DO23550	69 years, male, NA, stage:1, alive, 990 days	659.0
DO227801	77 years, female, NA, stage:1, alive, 660 days	656.2
DO45253	50 years, male, NA, stage:2, alive, 870 days	653.1
DO48700	78 years, female, NA, stage:2, alive, 810 days	652.6
DO48693	71 years, male, NA, stage:2, alive, 900 days	651.4
DO45219	78 years, male, NA, stage:2, alive, 1080 days	648.8
DO48677	58 years, male, NA, stage:3, alive, 1140 days	639.4
DO45243	74 years, female, NA, stage:3, alive, 930 days	629.9
DO48719	80 years, male, NA, stage:2, alive, 690 days	629.7
DO48725	66 years, male, NA, stage:1, alive, 780 days	627.8
DO45101	63 years, male, NA, stage:2, alive, 1680 days	623.2
DO45127	73 years, male, NA, stage:3, dead, 420 days	622.9
DO23541	65 years, male, NA, stage:2, alive, 930 days	620.1
DO45199	86 years, female, NA, stage:2, alive, 1350 days	616.5
DO45265	73 years, male, NA, stage:3, alive, 1020 days	615.9
DO48730	73 years, female, NA, stage:2, alive, 630 days	614.9
DO50799	66 years, female, NA, stage:2, alive, 540 days	611.4
DO50825	70 years, male, NA, stage:2, alive, 390 days	603.5
DO50791	79 years, female, NA, stage:1, dead, 480 days	603.4
DO23545	67 years, male, NA, stage:2, dead, 570 days	587.5
DO45279	67 years, male, NA, stage:3, alive, 1290 days	584.3
DO23548	78 years, female, NA, stage:1, alive, 840 days	582.9
DO23543	63 years, male, NA, stage:2, alive, 1020 days	577.2
DO23547	74 years, male, NA, stage:1, alive, 1020 days	576.8
DO50845	72 years, male, NA, stage:3, alive, 210 days	567.8
DO45171	56 years, male, NA, stage:3, alive, 600 days	566.7
DO48737	52 years, male, NA, stage:1, alive, 720 days	560.5
DO23533	61 years, male, NA, stage:2, alive, 900 days	552.7
DO23525	71 years, male, NA, stage:4, alive, 1050 days	552.6
DO45105	61 years, male, NA, stage:1, alive, 1680 days	550.3
DO50809	56 years, male, NA, stage:3, dead, 720 days	547.4
DO45131	53 years, male, NA, stage:4, dead, 360 days	543.7
DO50785	37 years, male, NA, stage:4, dead, 90 days	536.1
DO50829	78 years, male, NA, stage:3, alive, 570 days	534.0
DO50819	72 years, female, NA, stage:2, alive, 510 days	532.8
DO23531	78 years, female, NA, stage:3, alive, 900 days	530.3
DO48721	58 years, female, NA, stage:1, alive, 900 days	515.8
DO45119	74 years, male, NA, stage:3, dead, 510 days	510.9
DO23516	69 years, male, NA, stage:3, dead, 20 days	508.7
DO45179	78 years, female, NA, stage:2, alive, 600 days	504.8
DO50805	72 years, male, NA, stage:2, alive, 690 days	502.5
DO50816	63 years, male, NA, stage:2, alive, 390 days	498.3
DO45273	62 years, male, NA, stage:2, alive, 480 days	491.5
DO45181	84 years, female, NA, stage:2, alive, 1200 days	491.4
DO50803	62 years, female, NA, stage:1, alive, 540 days	485.8
DO45141	73 years, male, NA, stage:2, alive, 1320 days	477.6
DO48747	62 years, male, NA, stage:3, alive, 540 days	475.6
DO45255	81 years, male, NA, stage:3, alive, 720 days	474.6
DO23524	71 years, female, NA, stage:2, alive, 1050 days	473.1
DO48701	78 years, male, NA, stage:2, alive, 780 days	470.9
DO45159	65 years, male, NA, stage:3, alive, 1470 days	459.5
DO50802	49 years, male, NA, stage:2, alive, 930 days	457.5
DO45289	78 years, female, NA, stage:3, alive, 360 days	450.6
DO45193	68 years, female, NA, stage:4, dead, 120 days	449.2
DO45103	47 years, male, NA, stage:3, alive, 450 days	445.1
DO48695	77 years, male, NA, stage:2, alive, 720 days	439.2
DO45109	63 years, male, NA, stage:2, alive, 1590 days	436.9
DO45215	65 years, male, NA, stage:2, alive, 1170 days	431.1
DO50776	75 years, male, NA, stage:1, alive, 690 days	430.9
DO45241	49 years, male, NA, stage:1, alive, 1080 days	429.4
DO23519	65 years, male, NA, stage:3, alive, 630 days	428.8
DO45307	54 years, female, NA, stage:4, dead, 240 days	426.9
DO50808	68 years, male, NA, stage:2, alive, 570 days	422.4
DO48736	76 years, female, NA, stage:1, alive, 600 days	422.2
DO23517	62 years, male, NA, stage:2, alive, 1200 days	420.0
DO50818	65 years, male, NA, stage:2, alive, 510 days	416.3
DO48746	76 years, male, NA, stage:3, alive, 570 days	414.5
DO50813	56 years, male, NA, stage:2, alive, 420 days	413.0
DO45305	66 years, male, NA, stage:4, alive, 300 days	406.1
DO45257	46 years, male, NA, stage:3, alive, 810 days	403.8
DO23526	66 years, male, NA, stage:3, alive, 1050 days	403.6
DO48715	58 years, female, NA, stage:2, dead, 690 days	403.0
DO48716	71 years, male, NA, stage:2, alive, 720 days	399.3
DO45163	76 years, male, NA, stage:2, alive, 960 days	398.8
DO48704	68 years, female, NA, stage:3, alive, 750 days	396.8
DO50806	70 years, male, NA, stage:4, alive, 540 days	392.6
DO45107	63 years, female, NA, stage:2, alive, 1710 days	383.3
DO45285	59 years, male, NA, stage:3, alive, 480 days	381.5
DO23546	63 years, male, NA, stage:2, alive, 1050 days	376.3
DO48760	70 years, female, NA, stage:2, alive, 690 days	374.6
DO48741	64 years, male, NA, stage:3, alive, 240 days	371.7
DO45201	49 years, male, NA, stage:1, alive, 900 days	371.0
DO23534	60 years, male, NA, stage:2, alive, 840 days	370.8
DO23518	67 years, male, NA, stage:2, alive, 1320 days	370.0
DO23530	53 years, male, NA, stage:4, dead, 180 days	357.5
DO50811	62 years, male, NA, stage:1, alive, 450 days	353.8
DO48682	72 years, female, NA, stage:3, dead, 120 days	350.7
DO45301	56 years, male, NA, stage:2, dead, 1440 days	348.5
DO48706	72 years, male, NA, stage:2, alive, 870 days	347.1
DO48733	72 years, male, NA, stage:2, alive, 600 days	342.2
DO45153	77 years, female, NA, stage:2, alive, 1380 days	341.7
DO48759	73 years, male, NA, stage:3, alive, 720 days	332.1
DO45189	85 years, female, NA, stage:2, alive, 1200 days	321.2
DO227643	79 years, male, NA, stage:2, alive, 1260 days	320.3
DO50798	77 years, male, NA, stage:3, dead, 30 days	320.2
DO45303	62 years, female, NA, stage:3, alive, 990 days	315.5
DO23512	60 years, male, NA, stage:1, alive, 1260 days	308.5
DO50815	62 years, male, NA, stage:3, alive, 150 days	302.5
DO45095	66 years, male, NA, stage:2, alive, 1620 days	301.1
DO45203	71 years, female, NA, stage:2, alive, 1170 days	299.5
DO45161	74 years, male, NA, stage:2, dead, 540 days	295.0
DO50817	75 years, male, NA, stage:2, alive, 390 days	290.8
DO23551	73 years, male, NA, stage:3, dead, 150 days	283.2
DO48674	80 years, male, NA, stage:2, alive, 1260 days	281.5
DO23528	45 years, female, NA, stage:2, alive, 1020 days	272.6
DO45229	74 years, male, NA, stage:1, alive, 990 days	271.8
DO45195	62 years, male, NA, stage:1, alive, 390 days	264.4
DO50783	62 years, male, NA, stage:3, alive, 480 days	257.3
DO45097	69 years, male, NA, stage:3, alive, 1620 days	248.6
DO45125	58 years, male, NA, stage:3, alive, 1680 days	243.8
DO45185	89 years, male, NA, stage:2, alive, 600 days	230.0
DO45173	63 years, male, NA, stage:3, alive, 1170 days	221.9
DO45287	74 years, male, NA, stage:1, alive, 390 days	219.1
DO23508	79 years, female, NA, stage:2, alive, 390 days	218.4
DO45267	73 years, male, NA, stage:3, dead, 570 days	214.8
DO45249	57 years, male, NA, stage:1, alive, 630 days	206.8
DO23532	71 years, female, NA, stage:1, alive, 960 days	206.4
DO23544	67 years, male, NA, stage:2, alive, 960 days	197.0
DO45283	60 years, male, NA, stage:3, alive, 510 days	185.5
DO45245	75 years, female, NA, stage:2, dead, 240 days	184.2
DO45149	70 years, female, NA, stage:2, alive, 1260 days	169.8
DO50814	83 years, male, NA, stage:3, alive, 420 days	163.0
DO45217	69 years, female, NA, stage:3, dead, 270 days	160.0
DO45209	70 years, male, NA, stage:4, alive, 1350 days	115.3
DO45299	70 years, female, NA, stage:1, alive, 1440 days	107.5
DO45211	76 years, male, NA, stage:3, alive, 240 days	105.8
DO45259	65 years, male, NA, stage:3, alive, 330 days	76.5
DO50839	47 years, female, NA, stage:3, alive, 330 days	68.8
DO23523	52 years, male, NA, stage:3, alive, 1080 days	58.7
DO45277	64 years, male, NA, stage:3, alive, 600 days	56.7
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LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
425	Tumor	2.3
877	Tumor	2.2
375	Tumor	1.8
343	Tumor	1.6
635	Tumor	1.6
363	Tumor	1.5
517	Tumor	1.5
647	Tumor	1.5
113	Tumor	1.3
671	Tumor	1.3
223	Tumor	1.3
367	Tumor	1.2
391	Tumor	1.2
463	Tumor	1.1
977	Tumor	1.1
171	Tumor	1.1
135	Tumor	1.0
665	Tumor	1.0
573	Tumor	1.0
331	Tumor	1.0
112	Tumor	1.0
217	Tumor	0.9
745	Tumor	0.9
535	Tumor	0.9
285	Tumor	0.8
413	Tumor	0.8
1025	Tumor	0.8
435	Tumor	0.7
455	Tumor	0.7
267	Tumor	0.6
567	Tumor	0.6
341	Tumor	0.6
851	Tumor	0.6
487	Tumor	0.6
713	Tumor	0.6
227	Tumor	0.5
161	Tumor	0.5
297	Tumor	0.5
743	Tumor	0.5
937	Tumor	0.5
755	Tumor	0.5
427	Tumor	0.5
431	Tumor	0.4
965	Tumor	0.4
1043	Tumor	0.4
957	Tumor	0.4
1021	Tumor	0.4
981	Tumor	0.4
443	Tumor	0.4
123	Tumor	0.4
185	Tumor	0.3
863	Tumor	0.3
145	Tumor	0.3
355	Tumor	0.3
147	Tumor	0.3
715	Tumor	0.3
311	Tumor	0.2
724	Normal	0.2
131	Tumor	0.2
815	Tumor	0.2
1045	Tumor	0.2
383	Tumor	0.2
823	Tumor	0.2
813	Tumor	0.2
483	Tumor	0.2
923	Tumor	0.2
141	Tumor	0.2
473	Tumor	0.2
433	Tumor	0.2
395	Tumor	0.2
187	Tumor	0.1
1013	Tumor	0.1
571	Tumor	0.1
545	Tumor	0.1
277	Tumor	0.1
477	Tumor	0.1
221	Tumor	0.1
445	Tumor	0.1
951	Tumor	0.1
137	Tumor	0.1
421	Tumor	0.0
387	Tumor	0.0
471	Tumor	0.0
515	Tumor	0.0
967	Tumor	0.0
685	Tumor	0.0
527	Tumor	0.0
697	Tumor	0.0
943	Tumor	0.0
497	Tumor	0.0
525	Tumor	-0.1
975	Tumor	-0.1
361	Tumor	-0.1
537	Tumor	-0.1
191	Tumor	-0.1
617	Tumor	-0.1
857	Tumor	-0.1
451	Tumor	-0.1
663	Tumor	-0.1
493	Tumor	-0.1
817	Tumor	-0.1
385	Tumor	-0.2
533	Tumor	-0.2
195	Tumor	-0.2
883	Tumor	-0.2
353	Tumor	-0.2
915	Tumor	-0.2
357	Tumor	-0.2
727	Tumor	-0.2
127	Tumor	-0.2
313	Tumor	-0.2
213	Tumor	-0.2
925	Tumor	-0.2
125	Tumor	-0.2
963	Tumor	-0.2
737	Tumor	-0.3
553	Tumor	-0.3
271	Tumor	-0.3
1041	Tumor	-0.3
865	Tumor	-0.3
257	Tumor	-0.3
447	Tumor	-0.3
344	Normal	-0.3
917	Tumor	-0.3
192	Normal	-0.3
124	Normal	-0.3
1031	Tumor	-0.3
423	Tumor	-0.3
426	Normal	-0.3
376	Normal	-0.3
741	Tumor	-0.3
365	Tumor	-0.4
538	Normal	-0.4
342	Normal	-0.4
368	Normal	-0.4
428	Normal	-0.4
393	Tumor	-0.4
224	Normal	-0.4
523	Tumor	-0.4
666	Normal	-0.4
283	Tumor	-0.4
354	Normal	-0.4
424	Normal	-0.4
461	Tumor	-0.4
328	Normal	-0.4
615	Tumor	-0.4
261	Tumor	-0.4
814	Normal	-0.4
1027	Tumor	-0.4
672	Normal	-0.4
498	Normal	-0.5
1015	Tumor	-0.5
785	Tumor	-0.5
921	Tumor	-0.5
364	Normal	-0.5
913	Tumor	-0.5
414	Normal	-0.5
536	Normal	-0.5
952	Normal	-0.5
211	Tumor	-0.5
327	Tumor	-0.5
953	Tumor	-0.5
366	Normal	-0.5
491	Tumor	-0.5
172	Normal	-0.5
636	Normal	-0.5
881	Tumor	-0.5
142	Normal	-0.6
648	Normal	-0.6
861	Tumor	-0.6
415	Tumor	-0.6
478	Normal	-0.6
777	Tumor	-0.6
873	Tumor	-0.6
557	Tumor	-0.6
422	Normal	-0.6
474	Normal	-0.6
332	Normal	-0.6
778	Normal	-0.6
284	Normal	-0.6
627	Tumor	-0.6
362	Normal	-0.6
188	Normal	-0.6
358	Normal	-0.6
132	Normal	-0.6
516	Normal	-0.6
351	Tumor	-0.6
228	Normal	-0.6
352	Normal	-0.6
138	Normal	-0.6
411	Tumor	-0.6
456	Normal	-0.6
744	Normal	-0.6
563	Tumor	-0.6
286	Normal	-0.6
128	Normal	-0.6
114	Normal	-0.6
574	Normal	-0.6
278	Normal	-0.7
695	Tumor	-0.7
384	Normal	-0.7
558	Normal	-0.7
468	Normal	-0.7
464	Normal	-0.7
465	Tumor	-0.7
394	Normal	-0.7
212	Normal	-0.7
146	Normal	-0.7
186	Normal	-0.7
162	Normal	-0.7
312	Normal	-0.7
314	Normal	-0.7
662	Normal	-0.7
444	Normal	-0.7
262	Normal	-0.7
392	Normal	-0.7
126	Normal	-0.7
954	Normal	-0.7
386	Normal	-0.7
524	Normal	-0.7
494	Normal	-0.7
298	Normal	-0.7
111	Normal	-0.7
136	Normal	-0.7
513	Tumor	-0.7
911	Tumor	-0.7
434	Normal	-0.7
452	Normal	-0.7
467	Tumor	-0.8
664	Normal	-0.8
983	Tumor	-0.8
976	Normal	-0.8
867	Tumor	-0.8
958	Normal	-0.8
396	Normal	-0.8
196	Normal	-0.8
488	Normal	-0.8
356	Normal	-0.8
148	Normal	-0.8
1042	Normal	-0.8
214	Normal	-0.8
955	Tumor	-0.8
432	Normal	-0.8
564	Normal	-0.8
492	Normal	-0.8
518	Normal	-0.8
388	Normal	-0.8
554	Normal	-0.8
526	Normal	-0.8
481	Tumor	-0.8
956	Normal	-0.8
1028	Normal	-0.8
746	Normal	-0.8
884	Normal	-0.8
722	Normal	-0.8
528	Normal	-0.8
964	Normal	-0.8
568	Normal	-0.8
446	Normal	-0.9
534	Normal	-0.9
914	Normal	-0.9
222	Normal	-0.9
514	Normal	-0.9
944	Normal	-0.9
416	Normal	-0.9
982	Normal	-0.9
756	Normal	-0.9
448	Normal	-0.9
978	Normal	-0.9
546	Normal	-0.9
218	Normal	-0.9
818	Normal	-0.9
258	Normal	-0.9
628	Normal	-0.9
686	Normal	-0.9
466	Normal	-0.9
696	Normal	-0.9
268	Normal	-0.9
786	Normal	-0.9
916	Normal	-0.9
1016	Normal	-0.9
912	Normal	-0.9
661	Tumor	-0.9
1046	Normal	-0.9
232	Normal	-0.9
938	Normal	-0.9
412	Normal	-0.9
723	Tumor	-0.9
616	Normal	-0.9
716	Normal	-0.9
572	Normal	-0.9
984	Normal	-0.9
824	Normal	-1.0
1014	Normal	-1.0
436	Normal	-1.0
618	Normal	-1.0
721	Tumor	-1.0
968	Normal	-1.0
858	Normal	-1.0
882	Normal	-1.0
642	Normal	-1.0
966	Normal	-1.0
878	Normal	-1.0
472	Normal	-1.0
272	Normal	-1.0
1022	Normal	-1.0
868	Normal	-1.0
482	Normal	-1.0
866	Normal	-1.0
484	Normal	-1.0
641	Tumor	-1.0
918	Normal	-1.0
816	Normal	-1.0
714	Normal	-1.0
728	Normal	-1.0
852	Normal	-1.0
926	Normal	-1.1
738	Normal	-1.1
922	Normal	-1.1
462	Normal	-1.1
924	Normal	-1.1
742	Normal	-1.1
1044	Normal	-1.1
1032	Normal	-1.1
864	Normal	-1.1
874	Normal	-1.1
1026	Normal	-1.2
231	Tumor	-1.2
698	Normal	-1.2
862	Normal	-1.4
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA027066	Antibody CAB000126
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Cholangiocarcinoma
Carcinoma, Hepatocellular, NOS