HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:47.1 nTPM
HPA Brain:26.2 nTPM
GTEx:47.1 nTPM
FANTOM5:83.2 Scaled Tags Per Million
Pig:44.6 nTPM
Mouse:62.1 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019473
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 26.2
Sample id Sample description nTPM
Hippocampus
nTPM: 26.2
1898 Male, age 80, left hemisphere 31.4
1855 Male, age 76, left hemisphere 30.7
2529 Female, age 94, left hemisphere 24.7
2621 Female, age 67, right hemisphere 24.6
2148 Female, age 91, left hemisphere 24.5
1911 Female, age 85, right hemisphere 21.4
Dentate gyrus
nTPM: 23.4
2010 Male, age 76, both hemispheres 29.1
2530 Female, age 94, left hemisphere 27.6
2246 Female, age 85, both hemispheres 23.1
1927 Female, age 91, both hemispheres 23.0
2528 Male, age 74, both hemispheres 20.0
2531 Female, age 67, both hemispheres 17.4
Entorhinal gyrus
nTPM: 20.9
2117 Female, age 91, right hemisphere 27.2
2764 Male, age 80, right hemisphere 22.1
1938 Female, age 85, left hemisphere 21.7
1787 Male, age 76, left hemisphere 20.6
2686 Male, age 75, right hemisphere 17.9
2613 Female, age 94, left hemisphere 15.8
Hippocampus, CA1
nTPM: 25.7
1873 Female, age 85, both hemispheres 30.7
2527 Male, age 74, both hemispheres 29.0
2749 Male, age 80, left hemisphere 28.7
2045 Male, age 76, both hemispheres 23.4
2082 Female, age 91, right hemisphere 16.5
Hippocampus, CA2
nTPM: 24.4
1892 Male, age 76, both hemispheres 32.1
2249 Male, age 74, both hemispheres 29.4
2437 Female, age 94, left hemisphere 25.6
1963 Male, age 80, left hemisphere 23.6
1940 Female, age 85, left hemisphere 21.6
2113 Female, age 91, right hemisphere 14.2
Hippocampus, CA3
nTPM: 24.0
2436 Male, age 74, both hemispheres 31.2
1867 Male, age 76, both hemispheres 27.8
2137 Male, age 80, left hemisphere 22.5
1891 Female, age 85, both hemispheres 22.1
2861 Female, age 67, both hemispheres 20.5
2620 Female, age 94, left hemisphere 20.1
Parahippocampal cortex
nTPM: 21.9
2250 Female, age 67, right hemisphere 25.1
1850 Male, age 80, both hemispheres 25.0
2018 Male, age 76, both hemispheres 24.9
2245 Female, age 91, both hemispheres 24.1
1990 Female, age 91, right hemisphere 22.7
2532 Female, age 72, left hemisphere 21.3
2692 Male, age 74, both hemispheres 20.5
1933 Female, age 85, both hemispheres 20.4
2693 Female, age 94, both hemispheres 19.0
2622 Female, age 67, right hemisphere 15.9
Perirhinal gyrus
nTPM: 24.3
1847 Female, age 91, left hemisphere 27.5
1794 Male, age 80, right hemisphere 26.5
1841 Female, age 85, right hemisphere 24.3
2521 Female, age 94, right hemisphere 21.6
2848 Male, age 76, right hemisphere 21.5
Subiculum
nTPM: 24.6
2438 Female, age 94, left hemisphere 32.6
1901 Male, age 80, both hemispheres 24.4
2042 Male, age 76, both hemispheres 23.8
2619 Male, age 74, both hemispheres 23.8
1977 Female, age 85, both hemispheres 22.5
2729 Female, age 91, right hemisphere 20.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 47.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.1
Samples: 197

Max nTPM: 77.8
Min nTPM: 31.3
Std nTPM: 7.1
Median nTPM: 46.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 77.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 66.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 66.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 66.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 66.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 65.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 64.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 63.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 63.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 62.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 62.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 83.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 83.2
FF:10169-103B7 60 years, female 92.4
FF:10153-102I9 76 years, female 74.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 44.6
Pig sample Sample description nTPM
Subiculum
nTPM: 39.0
Samples: 4

Max nTPM: 44.2
Min nTPM: 35.6
Sample A Female 44.2
Sample B Female 38.4
Sample C Male 35.6
Sample D Male 37.6
Dorsal hippocampus
nTPM: 44.6
Samples: 4

Max nTPM: 59.0
Min nTPM: 36.4
Sample A Female 59.0
Sample B Female 40.3
Sample C Male 42.8
Sample D Male 36.4
Entorhinal cortex
nTPM: 34.7
Samples: 4

Max nTPM: 38.7
Min nTPM: 32.0
Sample A Female 38.7
Sample B Female 35.5
Sample C Male 32.0
Sample D Male 32.7
Ventral hippocampus
nTPM: 39.3
Samples: 4

Max nTPM: 42.4
Min nTPM: 31.0
Sample A Female 42.4
Sample B Female 31.0
Sample C Male 41.9
Sample D Male 41.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 62.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.3
Samples: 4

Max nTPM: 58.8
Min nTPM: 55.3
Sample A Male 56.7
Sample B Male 58.8
Sample C Female 58.2
Sample D Female 55.3
Hippocampal formation
nTPM: 62.1
Samples: 4

Max nTPM: 63.9
Min nTPM: 59.8
Sample A Male 62.2
Sample B Male 62.4
Sample C Female 63.9
Sample D Female 59.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
68632063 Antisense, RP_050125_01_F05, Mouse strain C57BL/6J (56 days, male) 1.9

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