COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Peripheral nerve/ganglion: Medium
RNA expressioni
Consensus:63.0 nTPM
HPA:62.7 nTPM
GTEx:63.0 nTPM
FANTOM5:66.6 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION
Neuroendocrine cellsTuft cellsColonocytesGoblet cellsT-cellsNK-cellsEnteric transient amplifying cellsEnteric stem cells050100150200250nCPM

COLON - Antibody stainingi
Antibody CAB016680
Endothelial cells Low
Glandular cells Medium
Peripheral nerve/ganglion Medium


COLON - HPA RNA-seqi
Average nTPMi 62.7
overview
Male, age 54
Colon sample 67
nTPM: 63.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 60.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 65.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 56.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 56.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 70.7
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 65
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 70.3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 60.6
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 68.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 62.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 53.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 60.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 63.0
GTEx sample id Sample description nTPM
48.858.273.532.4109.5020406080100120140160180
Colon - Sigmoid
Average nTPM: 63.0
Samples: 419

Max nTPM: 185.2
Min nTPM: 32.4
Std nTPM: 20.5
Median nTPM: 58.2
GTEX-11UD2-2226-SM-GI4WZ 50-59 years, male 185.2
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 158.1
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 148.2
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 142.5
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 140.9
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 128.1
GTEX-1HBPH-2526-SM-ACKXK 40-49 years, female 126.8
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 125.7
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 114.1
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 112.2
GTEX-13CF3-1326-SM-5LZXZ 60-69 years, female 110.9
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41.046.456.027.578.20102030405060708090100110120130
Colon - Transverse
Average nTPM: 51.1
Samples: 479

Max nTPM: 137.8
Min nTPM: 27.5
Std nTPM: 16.7
Median nTPM: 46.4
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 137.8
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 137.0
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 134.4
GTEX-15DZA-0926-SM-69LQ3 30-39 years, female 127.5
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 126.4
GTEX-QESD-1126-SM-H7OFF 20-29 years, male 112.2
GTEX-1CB4I-2226-SM-7P8SL 50-59 years, male 112.0
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 108.5
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 107.3
GTEX-1AX8Z-2726-SM-73KUC 60-69 years, male 106.0
GTEX-1HSMP-2326-SM-D3L8R 70-79 years, male 105.0
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COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 66.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 66.6
FF:10014-101C5 62,83,84 years, mixed 66.6

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