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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
318.2
nTPM
GTEx:
318.2
nTPM
FANTOM5:
514.0
Scaled Tags Per Million
Pig:
2.4
nTPM
Mouse:
369.8
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
318.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 318.2
Samples: 105
Max nTPM: 440.0
Min nTPM: 224.5
Std nTPM: 39.9
Median nTPM:
413_1
59 years, female
440.0
452_1
88 years, female
412.0
414_1
84 years, female
398.3
237_1
82 years, male
392.1
384_1
83 years, male
391.5
265_1
87 years, male
386.9
490_1
67 years, female
383.3
229_1
69 years, female
380.5
379_1
60 years, male
379.5
41_1
94 years, female
376.4
396_1
62 years, male
375.7
491_1
89 years, female
371.9
375_1
74 years, female
369.1
324_1
76 years, male
368.8
404_1
82 years, female
364.4
308_1
70 years, female
360.5
322_1
76 years, male
360.4
347_1
72 years, male
357.2
389_1
86 years, female
353.0
377_1
82 years, female
352.1
145_1
84 years, male
350.2
386_1
76 years, male
347.7
501_1
88 years, male
346.5
447_1
81 years, male
344.3
246_1
77 years, male
343.0
264_1
73 years, female
342.7
243_1
75 years, male
341.5
506_1
65 years, male
340.4
348_1
84 years, male
340.2
254_1
77 years, female
339.4
162_1
79 years, female
338.8
351_1
91 years, male
338.0
415_1
77 years, female
337.8
173_1
67 years, male
337.3
321_1
62 years, female
336.4
376_1
75 years, female
336.2
35_1
74 years, female
332.1
189_1
76 years, male
331.8
307_1
66 years, female
328.9
526_1
61 years, male
325.5
315_1
62 years, female
321.7
217_1
76 years, male
321.4
286_1
68 years, female
321.4
266_1
85 years, male
320.5
177_1
74 years, male
320.1
153_1
70 years, female
319.9
316_1
62 years, male
319.8
313_1
79 years, female
319.1
42_1
85 years, male
318.9
394_1
75 years, female
318.2
126_1
63 years, male
318.1
251_1
78 years, male
316.1
81_1
67 years, male
315.7
466_1
57 years, female
314.1
288_1
66 years, female
314.0
149_1
88 years, male
313.3
117_1
61 years, male
312.2
495_1
57 years, female
311.5
349_1
83 years, male
311.0
480_1
63 years, male
310.8
115_1
83 years, male
310.3
405_1
91 years, male
308.6
518_1
75 years, female
307.9
353_1
82 years, female
307.0
142_1
61 years, female
306.8
172_1
72 years, female
305.7
18_1
88 years, male
305.2
354_1
81 years, female
305.2
406_1
79 years, male
305.0
425_1
59 years, female
304.8
311_1
78 years, male
303.3
17_1
71 years, male
302.7
119_1
70 years, female
300.0
335_1
73 years, female
299.8
319_1
81 years, male
295.0
468_1
89 years, male
294.4
295_1
61 years, female
291.7
355_1
70 years, female
291.2
292_1
71 years, male
290.2
9_1
66 years, female
290.1
43_1
64 years, female
289.2
137_1
83 years, male
288.5
32_1
67 years, male
288.0
352_1
62 years, male
286.6
99_1
64 years, male
282.6
218_1
71 years, female
280.2
120_1
70 years, female
278.0
293_1
68 years, female
276.0
109_1
81 years, female
275.5
320_1
89 years, female
275.4
503_1
68 years, male
274.4
163_1
78 years, male
272.9
314_1
67 years, male
271.8
291_1
76 years, male
271.5
89_1
63 years, male
270.0
4_1
88 years, female
261.9
350_1
84 years, female
260.0
517_1
88 years, male
258.4
318_1
68 years, male
257.8
317_1
60 years, male
257.1
6_1
73 years, female
254.3
499_1
55 years, female
252.8
356_1
87 years, female
246.7
2_1
77 years, female
244.8
139_1
64 years, female
224.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.