HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:536.9 nTPM
HPA Brain:299.4 nTPM
GTEx:536.9 nTPM
FANTOM5:896.7 Scaled Tags Per Million
Pig:3.7 nTPM
Mouse:547.7 nTPM
Allen mouse:16.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB012982
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 299.4
Sample id Sample description nTPM
Hippocampus
nTPM: 275.2
1898 Male, age 80, left hemisphere 331.5
2621 Female, age 67, right hemisphere 285.5
1855 Male, age 76, left hemisphere 279.8
2529 Female, age 94, left hemisphere 263.3
1911 Female, age 85, right hemisphere 254.0
2148 Female, age 91, left hemisphere 236.8
Dentate gyrus
nTPM: 248.2
1927 Female, age 91, both hemispheres 295.5
2010 Male, age 76, both hemispheres 291.9
2246 Female, age 85, both hemispheres 277.3
2530 Female, age 94, left hemisphere 233.7
2528 Male, age 74, both hemispheres 202.2
2531 Female, age 67, both hemispheres 188.9
Entorhinal gyrus
nTPM: 229.5
2764 Male, age 80, right hemisphere 282.7
1938 Female, age 85, left hemisphere 278.4
1787 Male, age 76, left hemisphere 242.2
2117 Female, age 91, right hemisphere 242.1
2686 Male, age 75, right hemisphere 176.4
2613 Female, age 94, left hemisphere 155.1
Hippocampus, CA1
nTPM: 293.3
2749 Male, age 80, left hemisphere 415.4
2527 Male, age 74, both hemispheres 290.9
1873 Female, age 85, both hemispheres 283.1
2045 Male, age 76, both hemispheres 246.0
2082 Female, age 91, right hemisphere 231.4
Hippocampus, CA2
nTPM: 268.6
2249 Male, age 74, both hemispheres 322.5
1892 Male, age 76, both hemispheres 310.9
1963 Male, age 80, left hemisphere 282.1
1940 Female, age 85, left hemisphere 240.2
2113 Female, age 91, right hemisphere 239.0
2437 Female, age 94, left hemisphere 217.0
Hippocampus, CA3
nTPM: 248.2
2436 Male, age 74, both hemispheres 317.0
2137 Male, age 80, left hemisphere 303.8
1867 Male, age 76, both hemispheres 266.1
1891 Female, age 85, both hemispheres 245.1
2620 Female, age 94, left hemisphere 189.4
2861 Female, age 67, both hemispheres 167.6
Parahippocampal cortex
nTPM: 247.4
1850 Male, age 80, both hemispheres 293.6
1933 Female, age 85, both hemispheres 293.1
2245 Female, age 91, both hemispheres 283.4
2532 Female, age 72, left hemisphere 263.0
1990 Female, age 91, right hemisphere 258.4
2018 Male, age 76, both hemispheres 257.1
2250 Female, age 67, right hemisphere 257.0
2693 Female, age 94, both hemispheres 201.6
2622 Female, age 67, right hemisphere 185.9
2692 Male, age 74, both hemispheres 181.0
Perirhinal gyrus
nTPM: 299.4
1847 Female, age 91, left hemisphere 334.9
1794 Male, age 80, right hemisphere 311.0
2521 Female, age 94, right hemisphere 309.6
1841 Female, age 85, right hemisphere 303.9
2848 Male, age 76, right hemisphere 237.7
Subiculum
nTPM: 236.6
1901 Male, age 80, both hemispheres 261.1
2438 Female, age 94, left hemisphere 251.4
1977 Female, age 85, both hemispheres 248.3
2042 Male, age 76, both hemispheres 246.7
2619 Male, age 74, both hemispheres 226.5
2729 Female, age 91, right hemisphere 185.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 536.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 536.9
Samples: 197

Max nTPM: 1026.5
Min nTPM: 294.9
Std nTPM: 132.6
Median nTPM: 515.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 1026.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1014.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 938.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 825.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 824.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 823.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 810.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 781.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 770.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 770.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 769.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 896.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 896.7
FF:10169-103B7 60 years, female 1223.4
FF:10153-102I9 76 years, female 569.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 3.7
Pig sample Sample description nTPM
Subiculum
nTPM: 2.4
Samples: 4

Max nTPM: 2.7
Min nTPM: 2.1
Sample A Female 2.1
Sample B Female 2.7
Sample C Male 2.6
Sample D Male 2.1
Dorsal hippocampus
nTPM: 1.3
Samples: 4

Max nTPM: 2.4
Min nTPM: 0.5
Sample A Female 0.7
Sample B Female 0.5
Sample C Male 1.4
Sample D Male 2.4
Entorhinal cortex
nTPM: 3.7
Samples: 4

Max nTPM: 5.3
Min nTPM: 2.4
Sample A Female 2.4
Sample B Female 4.3
Sample C Male 2.9
Sample D Male 5.3
Ventral hippocampus
nTPM: 2.8
Samples: 4

Max nTPM: 4.2
Min nTPM: 1.9
Sample A Female 3.0
Sample B Female 4.2
Sample C Male 2.0
Sample D Male 1.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 547.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 490.1
Samples: 4

Max nTPM: 504.2
Min nTPM: 465.4
Sample A Male 465.4
Sample B Male 500.7
Sample C Female 504.2
Sample D Female 489.9
Hippocampal formation
nTPM: 547.8
Samples: 4

Max nTPM: 654.3
Min nTPM: 499.8
Sample A Male 654.3
Sample B Male 499.8
Sample C Female 520.0
Sample D Female 516.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 16.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.6
73573175 Antisense, RP_051121_03_D09, Mouse strain C57BL/6J (56 days, male) 16.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org