HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:35.6 nTPM
HPA Brain:41.5 nTPM
GTEx:35.6 nTPM
FANTOM5:73.3 Scaled Tags Per Million
Pig:20.0 nTPM
Mouse:34.7 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 41.5
Sample id Sample description nTPM
Hippocampus
nTPM: 41.5
1898 Male, age 80, left hemisphere 51.6
1911 Female, age 85, right hemisphere 43.5
2529 Female, age 94, left hemisphere 40.9
2148 Female, age 91, left hemisphere 40.0
1855 Male, age 76, left hemisphere 38.9
2621 Female, age 67, right hemisphere 34.4
Dentate gyrus
nTPM: 36.5
2528 Male, age 74, both hemispheres 44.9
2010 Male, age 76, both hemispheres 40.5
2530 Female, age 94, left hemisphere 35.4
2246 Female, age 85, both hemispheres 35.3
1927 Female, age 91, both hemispheres 34.5
2531 Female, age 67, both hemispheres 28.4
Entorhinal gyrus
nTPM: 37.9
2117 Female, age 91, right hemisphere 49.4
2764 Male, age 80, right hemisphere 45.1
1787 Male, age 76, left hemisphere 36.7
1938 Female, age 85, left hemisphere 34.3
2613 Female, age 94, left hemisphere 31.7
2686 Male, age 75, right hemisphere 30.0
Hippocampus, CA1
nTPM: 37.1
1873 Female, age 85, both hemispheres 42.1
2527 Male, age 74, both hemispheres 42.1
2749 Male, age 80, left hemisphere 35.9
2082 Female, age 91, right hemisphere 35.1
2045 Male, age 76, both hemispheres 30.1
Hippocampus, CA2
nTPM: 39.6
2249 Male, age 74, both hemispheres 49.8
1963 Male, age 80, left hemisphere 43.3
1940 Female, age 85, left hemisphere 40.4
2437 Female, age 94, left hemisphere 36.2
2113 Female, age 91, right hemisphere 35.6
1892 Male, age 76, both hemispheres 32.2
Hippocampus, CA3
nTPM: 39.0
2436 Male, age 74, both hemispheres 64.5
1891 Female, age 85, both hemispheres 44.0
1867 Male, age 76, both hemispheres 36.0
2620 Female, age 94, left hemisphere 33.2
2861 Female, age 67, both hemispheres 29.7
2137 Male, age 80, left hemisphere 26.7
Parahippocampal cortex
nTPM: 34.5
1850 Male, age 80, both hemispheres 39.2
2692 Male, age 74, both hemispheres 38.6
2018 Male, age 76, both hemispheres 37.8
2693 Female, age 94, both hemispheres 35.8
2532 Female, age 72, left hemisphere 35.1
1933 Female, age 85, both hemispheres 34.3
2245 Female, age 91, both hemispheres 34.2
1990 Female, age 91, right hemisphere 34.1
2250 Female, age 67, right hemisphere 30.2
2622 Female, age 67, right hemisphere 25.1
Perirhinal gyrus
nTPM: 32.8
1794 Male, age 80, right hemisphere 36.2
1847 Female, age 91, left hemisphere 34.5
2848 Male, age 76, right hemisphere 34.4
2521 Female, age 94, right hemisphere 31.6
1841 Female, age 85, right hemisphere 27.1
Subiculum
nTPM: 41.3
2729 Female, age 91, right hemisphere 45.0
2042 Male, age 76, both hemispheres 43.6
1901 Male, age 80, both hemispheres 41.2
2619 Male, age 74, both hemispheres 40.8
2438 Female, age 94, left hemisphere 38.9
1977 Female, age 85, both hemispheres 38.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 35.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.6
Samples: 197

Max nTPM: 60.8
Min nTPM: 12.4
Std nTPM: 8.3
Median nTPM: 34.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 60.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 60.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 60.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 59.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 55.9
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 54.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 51.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 49.3
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 49.1
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 48.9
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 48.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 73.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 73.3
FF:10169-103B7 60 years, female 92.4
FF:10153-102I9 76 years, female 54.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 20.0
Pig sample Sample description nTPM
Subiculum
nTPM: 14.7
Samples: 4

Max nTPM: 18.6
Min nTPM: 13.1
Sample A Female 18.6
Sample B Female 13.4
Sample C Male 13.5
Sample D Male 13.1
Dorsal hippocampus
nTPM: 20.0
Samples: 4

Max nTPM: 24.8
Min nTPM: 16.7
Sample A Female 24.8
Sample B Female 16.7
Sample C Male 20.7
Sample D Male 17.9
Entorhinal cortex
nTPM: 14.8
Samples: 4

Max nTPM: 17.0
Min nTPM: 11.8
Sample A Female 15.0
Sample B Female 17.0
Sample C Male 15.5
Sample D Male 11.8
Ventral hippocampus
nTPM: 17.7
Samples: 4

Max nTPM: 21.1
Min nTPM: 13.6
Sample A Female 21.1
Sample B Female 13.6
Sample C Male 20.7
Sample D Male 15.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 34.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.8
Samples: 4

Max nTPM: 31.3
Min nTPM: 24.8
Sample A Male 25.1
Sample B Male 24.8
Sample C Female 31.3
Sample D Female 25.8
Hippocampal formation
nTPM: 34.7
Samples: 4

Max nTPM: 35.7
Min nTPM: 32.5
Sample A Male 35.7
Sample B Male 32.5
Sample C Female 35.3
Sample D Female 35.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
68269060 Antisense, RP_041208_01_G11, Mouse strain C57BL/6J (56 days, male) 1.6

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