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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
33.3
nTPM
HPA Brain:
51.8
nTPM
GTEx:
33.3
nTPM
FANTOM5:
52.3
Scaled Tags Per Million
Pig:
13.7
nTPM
Mouse:
24.6
nTPM
Allen mouse:
1.0
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
51.8
Sample id
Sample description
nTPM
Amygdala nTPM: 51.8
2695
Female, age 67, right hemisphere
80.8
2814
Male, age 76, right hemisphere
65.9
1987
Female, age 91, left hemisphere
44.5
2514
Male, age 75, right hemisphere
35.8
2517
Female, age 94, left hemisphere
31.9
Basal amygdala nTPM: 35.9
1955
Male, age 76, both hemispheres
46.4
2609
Male, age 75, right hemisphere
46.0
2110
Male, age 80, left hemisphere
35.0
2243
Female, age 91, right hemisphere
32.5
2685
Female, age 94, left hemisphere
29.2
2827
Female, age 67, right hemisphere
26.1
Central amygdala nTPM: 43.6
1905
Male, age 76, both hemispheres
66.9
2515
Male, age 75, right hemisphere
43.5
2239
Male, age 80, left hemisphere
37.4
2701
Female, age 91, right hemisphere
35.6
2826
Female, age 94, left hemisphere
34.5
Corticomedial amygdala nTPM: 32.5
2428
Male, age 75, right hemisphere
42.9
2240
Male, age 76, both hemispheres
36.1
2829
Male, age 80, left hemisphere
34.7
2429
Female, age 94, left hemisphere
30.4
2242
Female, age 91, right hemisphere
29.5
2535
Female, age 67, right hemisphere
21.6
Lateral amygdala nTPM: 40.6
1883
Male, age 76, both hemispheres
61.2
2516
Male, age 75, right hemisphere
49.8
2256
Male, age 80, left hemisphere
37.9
2255
Female, age 91, right hemisphere
32.3
2830
Female, age 67, right hemisphere
32.0
2534
Female, age 94, left hemisphere
30.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
33.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 33.3
Samples: 152
Max nTPM: 68.6
Min nTPM: 15.8
Std nTPM: 8.8
Median nTPM: 31.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
68.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
60.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
59.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
56.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
55.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
53.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
53.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
51.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
51.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
49.7
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
48.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
48.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
47.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
46.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
45.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
45.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
44.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
43.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
42.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
42.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
41.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
41.2
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
41.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
40.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
40.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
40.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
40.1
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
39.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
39.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
39.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
38.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
38.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
38.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
38.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
37.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
37.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
37.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
37.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
37.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
37.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
36.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
36.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
36.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
36.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
36.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
36.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
35.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
35.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
35.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
35.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
35.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
35.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
35.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
35.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
35.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
35.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
34.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
34.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
34.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
34.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
34.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
34.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
33.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
33.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
33.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
33.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
33.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
33.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
33.1
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
33.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
32.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
32.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
32.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
31.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
31.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
31.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
31.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
31.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
31.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
31.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
31.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
31.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
30.9
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
30.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
30.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
30.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
30.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
30.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
30.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
30.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
30.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
30.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
29.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
29.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
29.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
29.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
29.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
29.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
28.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
28.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
28.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
28.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
28.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
28.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
28.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
27.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
27.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
27.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
27.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
27.3
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
27.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
26.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
26.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
26.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
26.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
26.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
26.7
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
26.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
26.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
26.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
26.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
26.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
26.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
26.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
26.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
26.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
25.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
25.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
25.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
25.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
25.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
25.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
25.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
25.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
25.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
24.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
24.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
23.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
23.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
23.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
23.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
22.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
22.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
21.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
21.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
21.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
20.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
20.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
20.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
20.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
18.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
15.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
24.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 24.6
Samples: 4
Max nTPM: 25.9
Min nTPM: 23.5
Sample A
Male
25.3
Sample B
Male
23.6
Sample C
Female
23.5
Sample D
Female
25.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
