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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
27.3
nTPM
GTEx:
27.3
nTPM
FANTOM5:
22.6
Scaled Tags Per Million
Pig:
12.7
nTPM
Mouse:
146.3
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
27.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 27.3
Samples: 105
Max nTPM: 42.9
Min nTPM: 17.7
Std nTPM: 5.2
Median nTPM:
490_1
67 years, female
42.9
495_1
57 years, female
42.2
89_1
63 years, male
39.8
491_1
89 years, female
39.6
139_1
64 years, female
36.6
466_1
57 years, female
36.4
2_1
77 years, female
35.8
415_1
77 years, female
35.8
6_1
73 years, female
35.3
447_1
81 years, male
34.0
308_1
70 years, female
33.8
119_1
70 years, female
33.4
35_1
74 years, female
33.3
501_1
88 years, male
33.3
396_1
62 years, male
33.2
18_1
88 years, male
32.7
81_1
67 years, male
32.1
162_1
79 years, female
31.9
17_1
71 years, male
31.8
145_1
84 years, male
31.5
137_1
83 years, male
31.4
254_1
77 years, female
31.4
307_1
66 years, female
31.2
311_1
78 years, male
31.1
315_1
62 years, female
30.7
377_1
82 years, female
30.6
414_1
84 years, female
30.6
4_1
88 years, female
30.4
518_1
75 years, female
30.4
117_1
61 years, male
30.3
293_1
68 years, female
30.2
384_1
83 years, male
30.2
348_1
84 years, male
30.1
413_1
59 years, female
29.7
322_1
76 years, male
29.6
153_1
70 years, female
29.5
246_1
77 years, male
29.5
468_1
89 years, male
29.3
321_1
62 years, female
29.0
265_1
87 years, male
28.8
324_1
76 years, male
28.8
9_1
66 years, female
28.3
32_1
67 years, male
28.3
43_1
64 years, female
28.2
288_1
66 years, female
27.9
189_1
76 years, male
27.8
229_1
69 years, female
27.7
316_1
62 years, male
27.7
480_1
63 years, male
27.7
120_1
70 years, female
27.5
142_1
61 years, female
26.9
313_1
79 years, female
26.6
126_1
63 years, male
26.5
317_1
60 years, male
26.4
452_1
88 years, female
26.3
251_1
78 years, male
26.2
405_1
91 years, male
26.2
350_1
84 years, female
26.1
517_1
88 years, male
26.1
319_1
81 years, male
25.8
404_1
82 years, female
25.5
115_1
83 years, male
25.1
218_1
71 years, female
25.1
292_1
71 years, male
25.0
376_1
75 years, female
25.0
526_1
61 years, male
25.0
149_1
88 years, male
24.9
351_1
91 years, male
24.9
353_1
82 years, female
24.9
386_1
76 years, male
24.6
42_1
85 years, male
24.5
356_1
87 years, female
24.5
352_1
62 years, male
24.4
406_1
79 years, male
24.3
217_1
76 years, male
24.2
375_1
74 years, female
24.1
389_1
86 years, female
23.8
177_1
74 years, male
23.6
320_1
89 years, female
23.5
109_1
81 years, female
23.4
314_1
67 years, male
23.4
173_1
67 years, male
23.2
503_1
68 years, male
22.5
172_1
72 years, female
22.4
354_1
81 years, female
22.4
499_1
55 years, female
22.3
264_1
73 years, female
22.2
335_1
73 years, female
22.2
318_1
68 years, male
21.9
291_1
76 years, male
21.7
266_1
85 years, male
21.6
347_1
72 years, male
21.6
506_1
65 years, male
21.5
243_1
75 years, male
21.2
237_1
82 years, male
21.0
355_1
70 years, female
20.6
295_1
61 years, female
20.5
425_1
59 years, female
20.5
349_1
83 years, male
20.3
286_1
68 years, female
20.1
163_1
78 years, male
20.0
379_1
60 years, male
19.8
394_1
75 years, female
19.3
41_1
94 years, female
18.5
99_1
64 years, male
17.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
