HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:15.9 nTPM
HPA Brain:13.6 nTPM
GTEx:15.9 nTPM
FANTOM5:10.4 Scaled Tags Per Million
Pig:30.4 nTPM
Mouse:123.3 nTPM
Allen mouse:10.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007598Antibody HPA011796
Glial cells MediumNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 13.6
Sample id Sample description nTPM
Hippocampus
nTPM: 12.2
2529 Female, age 94, left hemisphere 15.2
1898 Male, age 80, left hemisphere 12.8
2621 Female, age 67, right hemisphere 12.6
2148 Female, age 91, left hemisphere 11.4
1855 Male, age 76, left hemisphere 11.3
1911 Female, age 85, right hemisphere 9.9
Dentate gyrus
nTPM: 11.2
2530 Female, age 94, left hemisphere 13.6
2528 Male, age 74, both hemispheres 13.0
2010 Male, age 76, both hemispheres 12.5
1927 Female, age 91, both hemispheres 10.7
2246 Female, age 85, both hemispheres 9.9
2531 Female, age 67, both hemispheres 7.2
Entorhinal gyrus
nTPM: 10.8
2117 Female, age 91, right hemisphere 16.5
1787 Male, age 76, left hemisphere 11.7
1938 Female, age 85, left hemisphere 11.1
2686 Male, age 75, right hemisphere 10.3
2764 Male, age 80, right hemisphere 9.3
2613 Female, age 94, left hemisphere 6.1
Hippocampus, CA1
nTPM: 11.6
2527 Male, age 74, both hemispheres 14.0
2082 Female, age 91, right hemisphere 11.9
1873 Female, age 85, both hemispheres 11.6
2749 Male, age 80, left hemisphere 11.4
2045 Male, age 76, both hemispheres 8.9
Hippocampus, CA2
nTPM: 13.6
2249 Male, age 74, both hemispheres 17.2
1940 Female, age 85, left hemisphere 14.4
2113 Female, age 91, right hemisphere 12.8
1892 Male, age 76, both hemispheres 12.7
1963 Male, age 80, left hemisphere 12.4
2437 Female, age 94, left hemisphere 12.3
Hippocampus, CA3
nTPM: 11.4
2436 Male, age 74, both hemispheres 19.5
1867 Male, age 76, both hemispheres 12.8
1891 Female, age 85, both hemispheres 11.5
2620 Female, age 94, left hemisphere 10.1
2861 Female, age 67, both hemispheres 7.7
2137 Male, age 80, left hemisphere 6.7
Parahippocampal cortex
nTPM: 11.9
1850 Male, age 80, both hemispheres 14.0
2250 Female, age 67, right hemisphere 13.5
2622 Female, age 67, right hemisphere 12.6
2532 Female, age 72, left hemisphere 12.4
2018 Male, age 76, both hemispheres 12.2
1990 Female, age 91, right hemisphere 12.0
2245 Female, age 91, both hemispheres 11.8
2692 Male, age 74, both hemispheres 10.5
1933 Female, age 85, both hemispheres 10.3
2693 Female, age 94, both hemispheres 9.8
Perirhinal gyrus
nTPM: 12.8
1794 Male, age 80, right hemisphere 15.2
1841 Female, age 85, right hemisphere 13.9
2848 Male, age 76, right hemisphere 12.8
1847 Female, age 91, left hemisphere 12.1
2521 Female, age 94, right hemisphere 10.2
Subiculum
nTPM: 11.6
2619 Male, age 74, both hemispheres 15.3
2729 Female, age 91, right hemisphere 12.8
2438 Female, age 94, left hemisphere 11.8
1977 Female, age 85, both hemispheres 10.5
2042 Male, age 76, both hemispheres 10.0
1901 Male, age 80, both hemispheres 8.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 15.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.9
Samples: 197

Max nTPM: 56.6
Min nTPM: 6.5
Std nTPM: 5.1
Median nTPM: 15.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 56.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 30.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 28.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 28.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 26.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 25.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 25.2
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 24.4
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 24.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 24.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 23.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 10.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.4
FF:10153-102I9 76 years, female 12.5
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 30.4
Pig sample Sample description nTPM
Subiculum
nTPM: 29.7
Samples: 4

Max nTPM: 38.4
Min nTPM: 23.4
Sample A Female 38.4
Sample B Female 29.1
Sample C Male 28.0
Sample D Male 23.4
Dorsal hippocampus
nTPM: 30.5
Samples: 4

Max nTPM: 41.9
Min nTPM: 24.2
Sample A Female 41.9
Sample B Female 24.2
Sample C Male 31.4
Sample D Male 24.3
Entorhinal cortex
nTPM: 26.8
Samples: 4

Max nTPM: 30.1
Min nTPM: 21.8
Sample A Female 26.9
Sample B Female 30.1
Sample C Male 28.2
Sample D Male 21.8
Ventral hippocampus
nTPM: 26.6
Samples: 4

Max nTPM: 29.7
Min nTPM: 22.5
Sample A Female 28.9
Sample B Female 22.5
Sample C Male 29.7
Sample D Male 25.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 123.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 123.3
Samples: 4

Max nTPM: 134.3
Min nTPM: 103.5
Sample A Male 134.3
Sample B Male 131.9
Sample C Female 123.5
Sample D Female 103.5
Hippocampal formation
nTPM: 123.1
Samples: 4

Max nTPM: 138.2
Min nTPM: 112.8
Sample A Male 138.2
Sample B Male 112.8
Sample C Female 116.5
Sample D Female 124.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 10.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.9
74800914 Antisense, RP_060315_02_A06, Mouse strain C57BL/6J (56 days, male) 13.5
532592 Antisense, RP_040810_02_D03, Mouse strain C57BL/6J (56 days, male) 8.2

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