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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC61B is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
173.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
326.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
285.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
277.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
274.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
270.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
264.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
263.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
258.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
258.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
256.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
252.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
241.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
239.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
234.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
233.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
231.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
224.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
213.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
210.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
210.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
197.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
192.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
190.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
183.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
178.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
175.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
174.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
174.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
172.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
170.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
169.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
169.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
168.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
168.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
167.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
167.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
165.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
156.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
156.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
149.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
144.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
142.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
139.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
139.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
132.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
123.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
123.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
122.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
122.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
120.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
120.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
117.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
117.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
114.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
108.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
101.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
100.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
91.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
89.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
83.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
78.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
73.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
70.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC61B is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
176.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
453.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
424.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
385.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
364.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
349.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
341.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
340.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
334.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
316.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
312.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
312.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
309.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
306.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
301.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
300.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
297.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
291.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
291.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
287.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
276.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
276.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
275.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
274.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
272.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
271.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
271.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
269.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
268.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
267.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
266.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
266.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
266.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
266.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
265.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
262.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
259.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
256.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
254.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
253.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
250.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
249.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
249.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
247.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
247.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
247.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
247.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
246.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
245.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
245.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
245.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
244.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
242.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
242.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
241.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
239.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
238.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
238.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
237.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
236.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
236.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
233.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
233.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
233.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
230.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
230.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
230.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
229.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
229.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
229.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
228.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
228.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
228.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
228.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
227.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
227.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
227.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
225.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
225.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
224.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
224.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
224.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
222.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
221.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
221.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
220.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
220.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
219.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
219.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
219.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
218.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
218.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
217.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
217.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
216.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
216.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
216.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
215.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
215.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
214.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
214.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
214.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
213.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
213.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
212.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
212.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
212.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
212.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
211.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
210.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
210.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
209.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
209.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
208.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
208.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
208.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
208.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
208.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
207.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
207.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
207.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
206.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
206.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
206.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
206.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
205.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
204.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
204.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
204.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
204.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
203.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
203.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
202.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
202.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
201.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
201.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
200.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
199.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
198.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
198.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
198.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
198.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
198.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
198.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
197.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
197.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
197.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
197.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
197.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
196.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
196.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
196.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
195.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
195.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
195.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
195.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
194.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
194.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
194.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
194.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
194.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
193.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
193.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
192.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
192.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
192.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
191.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
190.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
190.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
190.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
190.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
190.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
190.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
189.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
189.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
188.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
188.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
188.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
188.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
187.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
187.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
187.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
187.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
187.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
186.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
186.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
186.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
186.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
186.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
185.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
185.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
185.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
185.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
184.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
184.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
184.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
183.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
183.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
183.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
183.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
183.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
183.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
182.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
182.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
182.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
182.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
182.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
182.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
181.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
181.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
181.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
181.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
181.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
181.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
180.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
180.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
180.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
180.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
180.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
179.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
179.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
179.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
179.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
179.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
178.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
178.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
178.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
178.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
178.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
178.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
178.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
176.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
176.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
176.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
175.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
175.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
175.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
175.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
175.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
174.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
174.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
174.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
174.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
174.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
173.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
173.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
173.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
173.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
172.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
172.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
172.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
172.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
172.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
172.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
171.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
171.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
171.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
171.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
171.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
171.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
171.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
171.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
171.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
171.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
171.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
170.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
170.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
170.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
170.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
169.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
169.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
169.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
169.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
168.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
168.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
168.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
167.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
167.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
167.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
167.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
166.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
166.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
165.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
165.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
165.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
165.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
165.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
165.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
165.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
165.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
164.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
164.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
164.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
164.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
164.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
164.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
163.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
163.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
163.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
163.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
162.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
162.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
162.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
162.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
162.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
162.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
161.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
161.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
161.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
161.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
160.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
160.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
160.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
159.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
159.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
159.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
158.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
158.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
158.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
158.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
157.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
157.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
157.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
157.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
157.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
157.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
156.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
156.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
156.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
156.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
156.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
156.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
156.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
155.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
155.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
155.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
155.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
155.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
155.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
154.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
154.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
154.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
154.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
153.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
152.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
152.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
152.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
152.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
152.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
151.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
151.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
151.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
150.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
150.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
150.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
150.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
149.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
149.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
149.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
148.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
148.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
148.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
148.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
148.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
148.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
147.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
147.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
147.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
146.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
146.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
146.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
146.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
145.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
144.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
144.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
144.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
144.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
143.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
143.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
143.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
142.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
142.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
142.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
141.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
141.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
140.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
140.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
140.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
140.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
140.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
140.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
140.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
140.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
140.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
139.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
139.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
139.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
139.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
139.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
139.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
139.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
139.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
139.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
138.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
138.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
138.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
137.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
137.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
137.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
137.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
137.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
136.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
136.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
136.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
135.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
135.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
135.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
134.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
134.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
134.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
133.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
133.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
133.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
132.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
132.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
131.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
131.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
131.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
131.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
131.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
131.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
129.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
129.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
128.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
128.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
128.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
127.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
127.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
127.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
127.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
127.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
127.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
127.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
126.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
126.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
125.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
125.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
125.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
124.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
124.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
123.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
123.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
123.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
122.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
122.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
121.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
121.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
121.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
120.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
120.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
119.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
119.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
118.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
118.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
117.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
117.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
115.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
115.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
115.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
115.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
114.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
114.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
113.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
113.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
113.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
112.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
112.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
112.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
111.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
110.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
110.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
110.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
110.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
109.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
109.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
108.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
108.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
108.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
107.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
106.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
106.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
105.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
105.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
105.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
103.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
103.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
103.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
102.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
102.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
102.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
101.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
100.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
100.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
99.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
98.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
98.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
97.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
96.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
95.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
95.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
94.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
92.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
90.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
85.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
85.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
83.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
82.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
82.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
81.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
78.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
70.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC61B is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
157.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
324.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
258.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
244.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
239.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
238.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
235.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
226.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
222.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
213.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
208.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
207.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
203.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
199.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
198.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
197.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
196.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
196.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
194.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
191.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
190.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
190.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
189.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
186.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
186.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
182.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
182.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
175.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
174.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
173.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
171.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
171.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
170.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
170.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
170.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
165.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
163.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
162.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
162.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
162.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
161.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
159.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
158.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
158.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
156.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
155.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
155.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
154.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
154.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
153.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
152.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
151.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
150.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
150.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
149.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
148.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
148.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
147.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
146.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
146.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
145.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
145.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
145.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
144.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
141.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
141.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
138.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
138.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
136.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
136.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
135.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
135.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
134.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
134.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
133.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
133.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
133.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
133.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
131.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
129.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
129.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
129.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
121.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
120.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
119.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
117.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
117.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
117.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
116.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
114.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
105.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
104.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
101.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
98.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
96.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
92.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
90.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
87.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
83.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
75.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC61B is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
155.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
906.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
320.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
303.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
303.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
278.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
272.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
270.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
266.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
256.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
247.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
245.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
244.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
243.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
242.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
240.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
237.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
233.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
230.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
229.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
221.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
219.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
219.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
217.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
216.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
216.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
214.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
214.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
214.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
213.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
212.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
210.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
209.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
209.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
208.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
207.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
206.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
206.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
205.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
205.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
204.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
204.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
202.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
202.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
201.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
201.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
199.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
199.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
198.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
198.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
197.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
196.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
195.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
195.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
195.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
194.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
193.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
193.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
192.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
192.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
191.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
191.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
189.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
189.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
188.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
188.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
188.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
188.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
187.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
187.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
186.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
186.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
185.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
184.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
184.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
184.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
183.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
183.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
183.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
182.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
182.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
181.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
181.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
181.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
181.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
180.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
179.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
179.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
178.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
178.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
178.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
178.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
177.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
177.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
177.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
176.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
176.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
176.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
175.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
175.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
175.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
174.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
174.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
173.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
173.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
172.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
172.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
171.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
171.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
170.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
170.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
169.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
169.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
169.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
169.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
168.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
167.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
166.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
166.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
165.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
165.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
165.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
164.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
164.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
163.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
162.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
162.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
162.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
160.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
160.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
159.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
159.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
158.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
158.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
158.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
156.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
156.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
155.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
155.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
155.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
155.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
155.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
153.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
152.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
152.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
152.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
151.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
151.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
149.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
149.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
148.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
148.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
148.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
147.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
147.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
147.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
146.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
146.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
146.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
146.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
144.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
144.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
144.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
143.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
142.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
142.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
141.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
141.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
139.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
138.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
138.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
137.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
137.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
136.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
136.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
135.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
135.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
135.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
135.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
134.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
134.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
134.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
134.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
134.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
134.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
133.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
133.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
133.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
133.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
132.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
130.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
130.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
130.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
129.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
129.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
128.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
128.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
127.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
127.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
126.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
126.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
126.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
126.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
125.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
125.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
124.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
122.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
122.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
121.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
121.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
121.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
121.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
118.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
117.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
117.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
115.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
115.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
115.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
114.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
114.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
113.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
113.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
112.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
112.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
112.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
109.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
107.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
107.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
106.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
106.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
106.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
104.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
104.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
103.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
103.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
102.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
100.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
100.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
99.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
99.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
98.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
97.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
97.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
96.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
95.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
94.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
94.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
94.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
93.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
90.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
89.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
88.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
88.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
87.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
85.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
85.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
85.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
84.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
80.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
79.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
78.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
77.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
76.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
76.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
75.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
75.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
74.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
73.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
72.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
70.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
69.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
67.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
67.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
66.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
63.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
61.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
57.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
54.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
53.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
52.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
48.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
47.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
39.5
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
1.3
CPT0088480003
Tumor
1.1
CPT0011410003
Tumor
0.9
CPT0023350003
Tumor
0.9
CPT0001180009
Tumor
0.8
CPT0088550004
Tumor
0.8
CPT0012180003
Tumor
0.8
CPT0076330003
Tumor
0.8
CPT0075130003
Tumor
0.7
CPT0025880003
Tumor
0.7
CPT0086950003
Tumor
0.7
CPT0065430003
Tumor
0.7
CPT0014450004
Tumor
0.6
CPT0086820003
Tumor
0.6
CPT0007320003
Tumor
0.6
CPT0012280003
Tumor
0.6
CPT0010110003
Tumor
0.6
CPT0069160003
Tumor
0.6
CPT0077110003
Tumor
0.5
CPT0001260009
Tumor
0.5
CPT0025050003
Tumor
0.5
CPT0088690003
Tumor
0.5
CPT0025230003
Tumor
0.5
CPT0081600003
Tumor
0.5
CPT0092160003
Tumor
0.5
CPT0002350011
Tumor
0.4
CPT0079410003
Tumor
0.4
CPT0078800003
Tumor
0.4
CPT0024670003
Tumor
0.4
CPT0092730003
Tumor
0.3
CPT0092800003
Normal
0.3
CPT0092190003
Normal
0.3
CPT0063630003
Tumor
0.3
CPT0081880003
Tumor
0.2
CPT0088640003
Normal
0.2
CPT0023710001
Normal
0.2
CPT0014160003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0088710001
Normal
0.2
CPT0089480003
Normal
0.2
CPT0084590001
Normal
0.2
CPT0086360003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0078660003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0025290003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0086970003
Normal
0.1
CPT0009000003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0078990003
Tumor
0.0
CPT0000640003
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0077320001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0000790001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0001500009
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0012080003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0021240003
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0086030003
Tumor
-0.1
CPT0015730003
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0012370003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0071150004
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0025580004
Tumor
-0.1
CPT0013790003
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0006950001
Normal
-0.1
CPT0012550003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0006440003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0088760003
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0079380003
Tumor
-0.1
CPT0023360001
Normal
-0.2
CPT0025170003
Tumor
-0.2
CPT0078840001
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0075570001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0065870003
Tumor
-0.2
CPT0064400001
Normal
-0.2
CPT0010160003
Tumor
-0.2
CPT0088570001
Normal
-0.2
CPT0026410003
Tumor
-0.2
CPT0006630003
Tumor
-0.2
CPT0066470004
Tumor
-0.2
CPT0084560003
Tumor
-0.2
CPT0020020001
Normal
-0.2
CPT0017850003
Tumor
-0.2
CPT0065820001
Normal
-0.2
CPT0019130003
Tumor
-0.2
CPT0082010001
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0002270011
Tumor
-0.2
CPT0078670001
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0069000003
Tumor
-0.2
CPT0007470001
Normal
-0.2
CPT0078930003
Tumor
-0.3
CPT0088920001
Normal
-0.3
CPT0002370001
Normal
-0.3
CPT0000890001
Normal
-0.3
CPT0092290003
Tumor
-0.3
CPT0019160001
Normal
-0.3
CPT0069010001
Normal
-0.3
CPT0088970003
Tumor
-0.3
CPT0089040001
Normal
-0.3
CPT0025920001
Normal
-0.3
CPT0081620001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0077140001
Normal
-0.3
CPT0025610001
Normal
-0.3
CPT0010170001
Normal
-0.4
CPT0065750003
Tumor
-0.4
CPT0078530001
Normal
-0.4
CPT0012290003
Normal
-0.4
CPT0066520001
Normal
-0.4
CPT0079000001
Normal
-0.4
CPT0014470001
Normal
-0.4
CPT0064370003
Tumor
-0.4
CPT0092790003
Tumor
-0.4
CPT0078510003
Tumor
-0.5
CPT0078830003
Tumor
-0.5
CPT0000780007
Tumor
-0.5
CPT0088900003
Tumor
-0.5
CPT0065690003
Tumor
-0.5
CPT0001550001
Normal
-0.5
CPT0000870016
Tumor
-0.5
CPT0017450001
Normal
-0.5
CPT0023690003
Tumor
-0.6
CPT0006900003
Tumor
-0.6
CPT0012090003
Normal
-0.6
CPT0077310003
Tumor
-0.6
CPT0066480003
Tumor
-0.6
CPT0065930003
Tumor
-0.6
CPT0063320003
Tumor
-0.6
CPT0081990003
Tumor
-0.7
CPT0025060001
Normal
-0.7
CPT0018250001
Normal
-0.7
CPT0012640003
Normal
-0.7
CPT0077490003
Tumor
-0.8
CPT0075560003
Tumor
-0.8
CPT0012770003
Normal
-0.8
CPT0024680001
Normal
-0.9
CPT0012570003
Normal
-0.9
CPT0015910003
Tumor
-1.0
CPT0009060003
Tumor
-1.1
CPT0009020003
Normal
-1.1
CPT0012920003
Normal
-1.2
CPT0012900004
Tumor
-1.2
CPT0079180003
Tumor
-1.3
CPT0017410003
Tumor
-1.5
CPT0009080003
Normal
-1.6
CPT0011240003
Tumor
-1.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
