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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC61B is not prognostic in Lung Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
215.5
Number of samples
497
Samples
Sample
Description
TPM
TCGA-62-A471-01A
0 years, male, white, stage:Stage IIB, alive, 1246 days
554.3
TCGA-05-4397-01A
0 years, male, stage:Stage IIB, dead, 731 days
522.5
TCGA-4B-A93V-01A
0 years, female, black or african american, stage:Stage IA, dead, 300 days
477.9
TCGA-49-4507-01A
0 years, female, white, stage:Stage IIIA, dead, 268 days
458.3
TCGA-78-7163-01A
0 years, male, white, stage:Stage IB, alive, 7248 days
440.8
TCGA-93-8067-01A
0 years, male, asian, stage:Stage IB, alive, 186 days
435.8
TCGA-86-8674-01A
0 years, male, white, stage:Stage IIA, alive, 806 days
430.5
TCGA-64-1678-01A
0 years, female, white, stage:'--, alive, 1189 days
422.9
TCGA-55-8506-01A
0 years, female, white, stage:Stage IIB, alive, 11 days
410.2
TCGA-86-8054-01A
0 years, male, white, stage:Stage IIB, alive, 1148 days
409.9
TCGA-86-A4JF-01A
0 years, male, white, stage:Stage IIB, dead, 737 days
405.0
TCGA-97-8176-01A
0 years, male, white, stage:Stage IIIA, dead, 468 days
397.9
TCGA-50-5051-01A
0 years, female, white, stage:Stage IIIA, dead, 478 days
389.0
TCGA-78-7542-01A
0 years, male, white, stage:Stage IB, dead, 321 days
384.8
TCGA-69-8253-01A
0 years, female, black or african american, stage:Stage IIA, alive, 426 days
375.0
TCGA-49-AAR0-01A
0 years, male, black or african american, stage:Stage IA, alive, 4765 days
372.9
TCGA-78-7166-01A
0 years, male, white, stage:Stage IIB, dead, 258 days
367.7
TCGA-86-A4D0-01A
0 years, male, white, stage:Stage IIA, dead, 116 days
364.4
TCGA-44-A47A-01A
0 years, female, white, stage:Stage IB, alive, 466 days
359.7
TCGA-44-2668-01A
0 years, male, white, stage:Stage IB, dead, 761 days
357.9
TCGA-64-5778-01A
0 years, male, white, stage:Stage IB, alive, 1305 days
345.0
TCGA-44-2665-01A
0 years, female, white, stage:Stage IIB, alive, 1301 days
341.2
TCGA-53-A4EZ-01A
0 years, male, white, stage:Stage IIA, alive, 1071 days
338.1
TCGA-62-A46P-01A
0 years, male, white, stage:Stage IB, dead, 594 days
337.2
TCGA-50-5044-01A
0 years, female, white, stage:Stage IIIB, dead, 624 days
336.4
TCGA-86-8673-01A
0 years, male, white, stage:Stage IB, alive, 862 days
334.4
TCGA-95-A4VN-01A
0 years, female, white, stage:Stage IIA, alive, 553 days
333.2
TCGA-78-7539-01A
0 years, female, white, stage:Stage IIA, alive, 791 days
333.0
TCGA-78-7220-01A
0 years, female, white, stage:Stage IIIA, dead, 807 days
331.6
TCGA-95-A4VP-01A
0 years, female, white, stage:Stage IIIA, alive, 605 days
328.9
TCGA-49-AARE-01A
0 years, female, black or african american, stage:Stage IA, dead, 1229 days
328.8
TCGA-55-7910-01A
0 years, female, black or african american, stage:Stage IIA, alive, 1040 days
326.8
TCGA-86-8359-01A
0 years, male, white, stage:Stage IIIA, dead, 444 days
325.6
TCGA-95-7944-01A
0 years, male, white, stage:Stage IA, alive, 377 days
321.8
TCGA-L9-A5IP-01A
0 years, female, black or african american, stage:Stage IV, dead, 58 days
319.4
TCGA-44-5644-01A
0 years, female, white, stage:Stage IB, alive, 863 days
318.2
TCGA-78-7537-01A
0 years, male, stage:Stage IB, dead, 1622 days
317.6
TCGA-64-1677-01A
0 years, female, white, stage:Stage IIIA, dead, 628 days
316.9
TCGA-50-6597-01A
0 years, female, white, stage:Stage IB, dead, 1268 days
313.3
TCGA-80-5608-01A
female, stage:Stage IA, alive, 2832 days
311.9
TCGA-91-6836-01A
0 years, female, white, stage:Stage IB, alive, 417 days
310.5
TCGA-62-8402-01A
0 years, female, white, stage:Stage IIIA, dead, 1498 days
309.5
TCGA-62-8394-01A
0 years, female, white, stage:Stage IIIB, dead, 139 days
307.7
TCGA-73-A9RS-01A
0 years, male, black or african american, stage:Stage IIB, dead, 340 days
307.6
TCGA-86-8278-01A
0 years, female, white, stage:Stage IIB, alive, 944 days
304.0
TCGA-MP-A4T8-01A
0 years, male, stage:Stage IIIA, dead, 161 days
303.8
TCGA-99-8032-01A
0 years, male, white, stage:Stage IA, alive, 44 days
303.6
TCGA-55-8087-01A
0 years, female, white, stage:Stage IB, alive, 462 days
302.5
TCGA-55-5899-01A
0 years, male, white, stage:'--, alive, 930 days
302.1
TCGA-05-4417-01A
0 years, female, stage:Stage IB, alive, 455 days
299.0
TCGA-86-7953-01A
0 years, female, white, stage:Stage IA, alive, 997 days
298.0
TCGA-05-4420-01A
0 years, male, stage:Stage IB, alive, 912 days
296.1
TCGA-64-5781-01A
0 years, female, white, stage:Stage IB, alive, 1559 days
295.1
TCGA-49-4494-01A
0 years, male, white, stage:Stage IIIA, dead, 1081 days
293.0
TCGA-86-8672-01A
0 years, male, white, stage:Stage IIB, dead, 19 days
292.3
TCGA-78-7146-01A
0 years, female, white, stage:Stage IIIA, dead, 173 days
290.9
TCGA-95-7562-01A
0 years, male, black or african american, stage:Stage IIA, dead, 87 days
290.3
TCGA-05-4425-01A
0 years, female, stage:Stage IV, alive, 669 days
290.2
TCGA-MP-A4T7-01A
0 years, female, stage:Stage IV, dead, 167 days
289.3
TCGA-69-8255-01A
0 years, male, white, stage:Stage IA, alive, 129 days
288.8
TCGA-78-7148-01A
0 years, male, white, stage:Stage IIB, dead, 626 days
288.7
TCGA-53-7624-01A
0 years, female, white, stage:Stage IV, dead, 1043 days
288.6
TCGA-55-6986-01A
0 years, female, white, stage:Stage IB, alive, 3261 days
288.3
TCGA-MP-A4TC-01A
0 years, male, white, stage:Stage IIIA, dead, 74 days
288.1
TCGA-55-8507-01A
0 years, male, white, stage:Stage IA, alive, 418 days
287.3
TCGA-50-6595-01A
0 years, female, white, stage:Stage IIIA, dead, 189 days
287.1
TCGA-44-7671-01A
0 years, male, black or african american, stage:Stage IB, alive, 889 days
287.0
TCGA-99-8025-01A
0 years, female, black or african american, stage:Stage IIIA, alive, 1060 days
286.7
TCGA-05-4398-01A
0 years, female, stage:Stage IIIB, alive, 1431 days
286.2
TCGA-86-8669-01A
0 years, male, white, stage:Stage IA, alive, 938 days
285.2
TCGA-55-8615-01A
0 years, male, white, stage:Stage IIIA, alive, 446 days
284.6
TCGA-55-8091-01A
0 years, male, white, stage:Stage IB, alive, 600 days
284.3
TCGA-75-5125-01A
male, stage:Stage IIB, dead, 2027 days
282.9
TCGA-55-A491-01A
0 years, female, white, stage:Stage IA, alive, 626 days
280.2
TCGA-44-2655-01A
0 years, female, white, stage:Stage IA, alive, 1324 days
279.0
TCGA-95-A4VK-01A
0 years, female, white, stage:Stage IIIA, alive, 651 days
278.0
TCGA-55-6983-01A
0 years, male, white, stage:Stage IIB, alive, 2823 days
277.6
TCGA-86-7954-01A
0 years, female, white, stage:Stage IB, alive, 605 days
276.8
TCGA-73-4659-01A
0 years, male, white, stage:Stage IIIA, dead, 711 days
276.4
TCGA-50-5935-01A
0 years, female, white, stage:Stage IA, dead, 653 days
275.6
TCGA-55-8620-01A
0 years, male, white, stage:Stage IV, dead, 375 days
275.6
TCGA-75-7027-01A
male, stage:Stage IB, alive, 3059 days
275.5
TCGA-78-7150-01A
0 years, male, white, stage:Stage IIB, dead, 666 days
274.3
TCGA-55-7281-01A
0 years, female, white, stage:Stage IA, alive, 872 days
274.1
TCGA-78-7160-01A
0 years, male, white, stage:Stage IV, dead, 697 days
273.5
TCGA-95-8039-01A
0 years, male, white, stage:Stage IA, alive, 830 days
273.5
TCGA-55-1596-01A
0 years, male, asian, stage:Stage IIB, alive, 2065 days
271.9
TCGA-MN-A4N4-01A
0 years, male, white, stage:Stage IA, alive, 1175 days
271.5
TCGA-97-8177-01A
0 years, female, white, stage:Stage IB, alive, 499 days
271.3
TCGA-75-5147-01A
female, stage:Stage IB, alive, 1333 days
269.6
TCGA-50-6591-01A
0 years, female, white, stage:Stage IV, dead, 119 days
269.4
TCGA-91-A4BD-01A
0 years, male, white, stage:Stage IIA, alive, 603 days
269.1
TCGA-97-8175-01A
0 years, female, white, stage:Stage IB, alive, 551 days
268.8
TCGA-05-4430-01A
0 years, female, stage:Stage IB, alive, 761 days
268.5
TCGA-73-4675-01A
0 years, male, white, stage:Stage IIIA, dead, 922 days
268.2
TCGA-97-A4M3-01A
0 years, female, white, stage:Stage IA, alive, 540 days
266.8
TCGA-49-4488-01A
0 years, female, white, stage:Stage IA, dead, 869 days
266.6
TCGA-78-7536-01A
0 years, male, white, stage:Stage IIIA, dead, 244 days
266.6
TCGA-49-4486-01A
0 years, male, white, stage:Stage IA, dead, 2318 days
265.7
TCGA-05-4390-01A
0 years, female, stage:Stage IB, alive, 1126 days
265.4
TCGA-50-5045-01A
0 years, female, black or african american, stage:'--, dead, 2174 days
265.3
TCGA-55-8094-01A
0 years, male, white, stage:Stage IV, alive, 541 days
264.7
TCGA-95-7043-01A
0 years, female, white, stage:Stage IA, dead, 503 days
264.5
TCGA-49-AARQ-01A
0 years, female, black or african american, stage:Stage I, alive, 6732 days
263.5
TCGA-73-4670-01A
0 years, female, white, stage:Stage IV, alive, 131 days
263.5
TCGA-62-A46V-01A
0 years, female, white, stage:Stage IB, alive, 2199 days
263.3
TCGA-49-4506-01A
0 years, female, white, stage:Stage IIB, dead, 999 days
262.6
TCGA-NJ-A55R-01A
0 years, male, white, stage:Stage IA, alive, 603 days
262.6
TCGA-05-4427-01A
0 years, female, stage:Stage IIB, alive, 791 days
262.4
TCGA-69-7979-01A
0 years, female, white, stage:Stage IB, alive, 408 days
261.8
TCGA-NJ-A4YP-01A
0 years, male, white, stage:Stage IB, alive, 50 days
258.8
TCGA-49-6742-01A
0 years, male, white, stage:Stage IIA, dead, 488 days
258.7
TCGA-44-3398-01A
0 years, female, white, stage:Stage IA, alive, 1163 days
258.1
TCGA-78-8655-01A
0 years, female, stage:Stage IA, alive, 2360 days
254.1
TCGA-L9-A50W-01A
0 years, male, black or african american, stage:Stage IIA, dead, 442 days
252.9
TCGA-44-6145-01A
0 years, female, white, stage:Stage IA, alive, 595 days
252.7
TCGA-62-8398-01A
0 years, male, white, stage:Stage IIIA, dead, 444 days
252.4
TCGA-55-8505-01A
0 years, male, white, stage:Stage IIIA, alive, 440 days
252.3
TCGA-91-8499-01A
0 years, female, white, stage:Stage IA, alive, 36 days
250.9
TCGA-49-AAR9-01A
0 years, male, black or african american, stage:Stage IIB, dead, 260 days
250.4
TCGA-97-A4M0-01A
0 years, female, white, stage:Stage IB, alive, 652 days
250.1
TCGA-73-7499-01A
0 years, female, white, stage:Stage IB, dead, 1531 days
250.0
TCGA-78-7154-01A
0 years, male, white, stage:Stage IIIA, dead, 593 days
249.5
TCGA-55-A48Y-01A
0 years, male, white, stage:Stage IIA, alive, 630 days
249.2
TCGA-64-1676-01A
0 years, male, white, stage:Stage IA, alive, 1728 days
248.9
TCGA-44-3918-01A
0 years, female, white, stage:Stage IA, alive, 1036 days
248.5
TCGA-86-8056-01A
0 years, female, white, stage:Stage IIIA, alive, 139 days
247.3
TCGA-38-4626-01A
0 years, female, white, stage:'--, alive, 3674 days
246.8
TCGA-64-5774-01A
0 years, male, white, stage:Stage IB, alive, 2676 days
246.3
TCGA-MP-A4SW-01A
0 years, male, white, stage:Stage IIB, dead, 1778 days
246.1
TCGA-50-5072-01A
0 years, male, white, stage:Stage IIIA, dead, 250 days
244.2
TCGA-69-7980-01A
0 years, female, white, stage:Stage I, alive, 411 days
243.2
TCGA-64-1680-01A
0 years, male, white, stage:Stage IV, alive, 1126 days
241.8
TCGA-67-6215-01A
0 years, female, white, stage:Stage IB, alive, 174 days
241.8
TCGA-55-A492-01A
0 years, female, white, stage:Stage IA, alive, 596 days
241.3
TCGA-97-A4M5-01A
0 years, male, white, stage:Stage IA, alive, 634 days
241.2
TCGA-05-4249-01A
0 years, male, stage:Stage IB, alive, 1523 days
241.0
TCGA-44-6776-01A
0 years, female, white, stage:Stage IA, alive, 2616 days
240.7
TCGA-38-4631-01A
0 years, female, white, stage:Stage IB, dead, 354 days
240.4
TCGA-73-4666-01A
0 years, female, white, stage:Stage IV, alive, 800 days
239.8
TCGA-97-7938-01A
0 years, female, white, stage:Stage IA, dead, 18 days
239.7
TCGA-35-4123-01A
0 years, male, white, stage:Stage IA, alive, 182 days
239.7
TCGA-MN-A4N5-01A
0 years, male, white, stage:Stage IA, alive, 84 days
239.0
TCGA-05-5420-01A
0 years, male, stage:Stage IIIA, alive, 457 days
238.8
TCGA-86-8074-01A
0 years, female, white, stage:Stage IIA, alive, 24 days
238.7
TCGA-38-4632-01A
0 years, male, black or african american, stage:Stage IV, dead, 1357 days
238.5
TCGA-50-5068-01A
0 years, female, white, stage:Stage IIB, dead, 1499 days
237.9
TCGA-55-8299-01A
0 years, female, white, stage:Stage IA, dead, 469 days
237.6
TCGA-75-5146-01A
male, stage:Stage IB, alive, 2368 days
237.6
TCGA-49-6761-01A
0 years, female, white, stage:Stage IIIA, alive, 354 days
237.5
TCGA-55-8097-01A
0 years, female, white, stage:Stage IA, alive, 476 days
237.3
TCGA-50-6592-01A
0 years, female, white, stage:Stage IB, dead, 777 days
237.1
TCGA-93-A4JQ-01A
0 years, male, white, stage:Stage IA, alive, 526 days
237.1
TCGA-73-7498-01A
0 years, female, white, stage:Stage IA, alive, 1189 days
236.8
TCGA-78-7540-01A
0 years, female, white, stage:Stage IB, dead, 1197 days
236.5
TCGA-93-7347-01A
0 years, female, white, stage:Stage IA, alive, 683 days
236.1
TCGA-99-8033-01A
0 years, female, white, stage:Stage IV, dead, 656 days
235.7
TCGA-67-3773-01A
0 years, female, white, stage:Stage IB, alive, 427 days
235.1
TCGA-44-5643-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 1013 days
234.9
TCGA-55-6975-01A
0 years, male, white, stage:Stage IIB, dead, 118 days
234.7
TCGA-64-5815-01A
0 years, male, white, stage:Stage IIB, alive, 866 days
234.5
TCGA-55-8203-01A
0 years, female, white, stage:Stage IA, alive, 547 days
234.2
TCGA-86-6562-01A
0 years, male, white, stage:Stage IIA, dead, 376 days
232.6
TCGA-44-A47B-01A
0 years, male, white, stage:Stage IB, alive, 287 days
232.3
TCGA-38-4627-01A
0 years, female, white, stage:Stage IIA, dead, 1147 days
232.3
TCGA-55-6543-01A
0 years, female, white, stage:Stage IA, alive, 435 days
230.5
TCGA-55-6972-01A
0 years, male, white, stage:Stage IB, dead, 1632 days
230.1
TCGA-86-8076-01A
0 years, male, white, stage:Stage IA, alive, 993 days
229.8
TCGA-MP-A4TE-01A
0 years, male, white, stage:Stage IIA, dead, 896 days
229.6
TCGA-67-6216-01A
0 years, female, white, stage:Stage IA, alive, 141 days
229.3
TCGA-05-4396-01A
0 years, male, stage:Stage IIIB, dead, 303 days
229.1
TCGA-86-8073-01A
0 years, male, white, stage:Stage IB, alive, 740 days
228.9
TCGA-50-6594-01A
0 years, female, black or african american, stage:Stage IIIA, dead, 370 days
227.6
TCGA-35-3615-01A
0 years, male, white, stage:Stage IB, alive, 14 days
227.5
TCGA-78-7161-01A
0 years, female, white, stage:Stage IIB, dead, 291 days
227.5
TCGA-55-A48X-01A
0 years, female, white, stage:Stage IIA, alive, 689 days
227.4
TCGA-MP-A4TD-01A
0 years, male, white, stage:Stage IIIA, dead, 307 days
226.9
TCGA-55-1594-01A
0 years, male, white, stage:Stage IIIA, alive, 1178 days
226.5
TCGA-MP-A4TI-01A
0 years, male, white, stage:Stage IIA, dead, 429 days
226.5
TCGA-55-8208-01A
0 years, female, white, stage:Stage IA, alive, 674 days
226.4
TCGA-55-7570-01A
0 years, male, black or african american, stage:Stage IA, alive, 824 days
226.0
TCGA-44-7670-01A
0 years, female, white, stage:Stage IIA, alive, 882 days
225.7
TCGA-49-4512-01A
0 years, female, white, stage:Stage IIIA, dead, 905 days
223.1
TCGA-05-5715-01A
0 years, female, stage:Stage IB, alive, 62 days
223.1
TCGA-86-8585-01A
0 years, male, white, stage:Stage IB, alive, 353 days
222.5
TCGA-55-A48Z-01A
0 years, female, white, stage:Stage IIIB, alive, 651 days
222.0
TCGA-44-2656-01A
0 years, male, white, stage:Stage IB, alive, 1429 days
221.7
TCGA-78-7153-01A
0 years, female, white, stage:Stage IB, alive, 3635 days
221.0
TCGA-L9-A443-01A
0 years, female, white, stage:Stage IA, dead, 193 days
220.5
TCGA-91-8497-01A
0 years, female, white, stage:Stage IA, dead, 434 days
220.1
TCGA-MP-A4TJ-01A
0 years, female, stage:Stage IA, dead, 339 days
219.3
TCGA-MP-A4TF-01A
0 years, female, white, stage:Stage IIA, dead, 336 days
219.1
TCGA-50-5055-01A
0 years, female, white, stage:Stage IIA, dead, 1830 days
218.8
TCGA-50-5933-01A
0 years, male, white, stage:Stage IIIB, dead, 2393 days
218.5
TCGA-49-4514-01A
0 years, female, white, stage:Stage IA, alive, 1700 days
218.3
TCGA-55-8616-01A
0 years, female, white, stage:Stage IB, alive, 48 days
218.1
TCGA-78-8662-01A
0 years, female, stage:Stage IB, dead, 3361 days
216.5
TCGA-05-5423-01A
0 years, male, stage:Stage IIB, alive, 151 days
216.3
TCGA-44-2666-01A
0 years, male, white, stage:Stage IB, dead, 97 days
216.2
TCGA-71-8520-01A
0 years, female, asian, stage:Stage IB, dead, 210 days
215.9
TCGA-05-4389-01A
0 years, male, stage:Stage IA, alive, 1369 days
215.0
TCGA-NJ-A4YI-01A
0 years, female, white, stage:Stage IIIA, dead, 4 days
214.6
TCGA-NJ-A55O-01A
0 years, female, white, stage:Stage IIA, alive, 13 days
214.4
TCGA-50-5931-01A
0 years, female, white, stage:Stage IB, dead, 434 days
214.3
TCGA-95-7947-01A
0 years, male, white, stage:Stage IA, alive, 477 days
214.2
TCGA-53-7813-01A
0 years, female, white, stage:Stage IIIB, alive, 424 days
214.0
TCGA-78-7162-01A
0 years, male, white, stage:Stage IA, dead, 3169 days
214.0
TCGA-78-7535-01A
0 years, male, white, stage:Stage IB, dead, 949 days
213.8
TCGA-62-A46S-01A
0 years, male, white, stage:Stage IB, dead, 1653 days
213.7
TCGA-49-AAQV-01A
0 years, female, black or african american, stage:Stage II, dead, 677 days
213.2
TCGA-78-7156-01A
0 years, male, white, stage:Stage IV, dead, 976 days
212.7
TCGA-99-8028-01A
0 years, female, black or african american, stage:Stage IA, alive, 1118 days
212.2
TCGA-50-5936-01A
0 years, male, white, stage:Stage IIIA, dead, 257 days
212.2
TCGA-49-4510-01A
0 years, female, black or african american, stage:Stage IIB, dead, 896 days
211.8
TCGA-50-5066-01A
0 years, male, black or african american, stage:Stage IB, alive, 1442 days
211.4
TCGA-55-6982-01A
0 years, female, white, stage:Stage IIB, dead, 995 days
210.6
TCGA-97-7547-01A
0 years, female, white, stage:Stage IB, alive, 1965 days
210.3
TCGA-49-6745-01A
0 years, male, white, stage:Stage IIIA, alive, 522 days
210.1
TCGA-80-5611-01A
male, stage:Stage IB, alive, 2595 days
209.6
TCGA-78-7155-01A
0 years, male, white, stage:Stage IB, dead, 1171 days
209.4
TCGA-55-7903-01A
0 years, male, white, stage:Stage IA, alive, 567 days
209.1
TCGA-MP-A4T9-01A
0 years, female, white, stage:Stage IIIA, dead, 1265 days
208.1
TCGA-05-4432-01A
0 years, male, stage:Stage IIB, alive, 761 days
206.9
TCGA-73-4677-01A
0 years, male, white, stage:'--, dead, 38 days
206.0
TCGA-62-A470-01A
0 years, male, white, stage:Stage IB, dead, 1194 days
205.7
TCGA-73-4658-01A
0 years, female, white, stage:Stage IB, dead, 1600 days
205.5
TCGA-44-8120-01A
0 years, male, black or african american, stage:Stage IB, alive, 260 days
205.2
TCGA-NJ-A4YG-01A
0 years, male, white, stage:Stage IB, alive, 2261 days
205.0
TCGA-05-4434-01A
0 years, female, stage:Stage IV, dead, 457 days
204.9
TCGA-49-4487-01A
0 years, female, white, stage:Stage IA, dead, 855 days
204.8
TCGA-55-8090-01A
0 years, male, white, stage:Stage IA, dead, 598 days
204.8
TCGA-MP-A5C7-01A
0 years, female, white, stage:Stage IB, alive, 2248 days
204.2
TCGA-97-A4LX-01A
0 years, male, white, stage:Stage IB, alive, 614 days
203.9
TCGA-38-4630-01A
0 years, female, white, stage:Stage IB, dead, 1073 days
203.4
TCGA-05-5429-01A
0 years, male, stage:Stage IIIA, dead, 275 days
203.4
TCGA-55-7815-01A
0 years, male, stage:Stage IB, alive, 773 days
203.0
TCGA-86-8671-01A
0 years, female, white, stage:Stage IIB, alive, 839 days
202.3
TCGA-55-6968-01A
0 years, male, white, stage:Stage IV, dead, 1293 days
201.8
TCGA-64-1679-01A
0 years, female, white, stage:Stage IIIA, alive, 2488 days
201.8
TCGA-38-4629-01A
0 years, male, white, stage:Stage IIB, dead, 864 days
201.4
TCGA-97-7546-01A
0 years, female, white, stage:Stage IA, alive, 1285 days
201.4
TCGA-35-5375-01A
0 years, male, white, stage:Stage IIIA, alive, 264 days
201.1
TCGA-44-7672-01A
0 years, female, white, stage:Stage IA, alive, 719 days
201.1
TCGA-55-8514-01A
0 years, female, black or african american, stage:Stage IB, alive, 520 days
201.1
TCGA-J2-8194-01A
0 years, female, white, stage:Stage IIB, alive, 724 days
201.0
TCGA-86-A4P7-01A
0 years, female, white, stage:Stage IB, alive, 415 days
200.8
TCGA-MN-A4N1-01A
0 years, male, black or african american, stage:Stage IIA, alive, 827 days
200.6
TCGA-78-7152-01A
0 years, male, white, stage:Stage IB, dead, 1215 days
200.5
TCGA-55-8621-01A
0 years, female, white, stage:Stage IA, alive, 515 days
200.5
TCGA-MP-A4SV-01A
0 years, male, stage:Stage IB, dead, 2620 days
200.4
TCGA-MP-A4TH-01A
0 years, female, white, stage:Stage IA, alive, 741 days
198.9
TCGA-55-6979-01A
0 years, female, white, stage:Stage IIB, dead, 237 days
198.8
TCGA-44-6779-01A
0 years, female, white, stage:Stage IIB, dead, 500 days
198.8
TCGA-55-6984-01A
0 years, female, white, stage:Stage IIB, dead, 760 days
198.6
TCGA-78-7147-01A
0 years, female, white, stage:Stage IIB, dead, 586 days
198.6
TCGA-64-1681-01A
0 years, female, white, stage:Stage IA, dead, 1167 days
198.6
TCGA-05-4405-01A
0 years, female, stage:Stage IB, alive, 610 days
198.5
TCGA-78-7145-01A
0 years, female, white, stage:Stage IV, dead, 826 days
198.4
TCGA-NJ-A4YQ-01A
0 years, female, white, stage:Stage IA, alive, 1432 days
198.4
TCGA-91-6849-01A
0 years, female, black or african american, stage:Stage IIIA, alive, 35 days
198.3
TCGA-NJ-A7XG-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 617 days
198.2
TCGA-44-7659-01A
0 years, male, white, stage:Stage IA, alive, 691 days
197.7
TCGA-69-8453-01A
0 years, male, white, stage:Stage IIB, alive, 813 days
197.6
TCGA-55-6970-01A
0 years, female, white, stage:Stage IIIA, dead, 464 days
197.4
TCGA-97-7553-01A
0 years, female, white, stage:Stage IA, alive, 1870 days
197.2
TCGA-78-8640-01A
0 years, male, stage:Stage IIA, alive, 7062 days
197.1
TCGA-NJ-A4YF-01A
0 years, female, black or african american, stage:Stage IA, alive, 2161 days
197.1
TCGA-69-7765-01A
0 years, male, black or african american, stage:'--, alive, 165 days
196.8
TCGA-49-AARN-01A
0 years, female, black or african american, stage:Stage IA, dead, 1135 days
196.7
TCGA-MP-A4TA-01A
0 years, female, white, stage:Stage IA, dead, 950 days
196.1
TCGA-50-5941-01A
0 years, female, white, stage:Stage IIIA, alive, 1474 days
195.9
TCGA-MP-A4TK-01A
0 years, female, stage:Stage IIB, dead, 582 days
195.7
TCGA-78-8660-01A
0 years, male, stage:Stage IIB, dead, 321 days
195.6
TCGA-69-7974-01A
0 years, female, white, stage:Stage IIIA, alive, 184 days
195.6
TCGA-44-7661-01A
0 years, female, white, stage:Stage IB, dead, 557 days
195.5
TCGA-97-A4M6-01A
0 years, female, white, stage:Stage IA, alive, 568 days
195.1
TCGA-95-7567-01A
0 years, male, white, stage:Stage IIB, alive, 568 days
194.8
TCGA-50-6590-01A
0 years, female, white, stage:Stage IB, dead, 1288 days
194.4
TCGA-55-7728-01A
0 years, female, white, stage:Stage IB, alive, 704 days
193.8
TCGA-83-5908-01A
0 years, female, white, stage:Stage IA, alive, 824 days
193.5
TCGA-50-5944-01A
0 years, female, white, stage:Stage IA, alive, 1750 days
193.1
TCGA-78-7159-01A
0 years, female, white, stage:Stage IA, alive, 1974 days
193.1
TCGA-75-6212-01A
female, stage:Stage IIB, dead, 1516 days
193.0
TCGA-50-5930-01A
0 years, male, white, stage:Stage IIIA, dead, 282 days
192.4
TCGA-05-5425-01A
0 years, male, stage:Stage IIB, alive, 882 days
192.0
TCGA-44-7669-01A
0 years, male, black or african american, stage:Stage IIA, dead, 574 days
191.9
TCGA-86-7701-01A
0 years, male, white, stage:Stage IV, alive, 947 days
191.8
TCGA-62-8397-01A
0 years, female, white, stage:Stage IIB, alive, 1289 days
191.7
TCGA-69-7973-01A
0 years, female, white, stage:Stage IB, alive, 230 days
191.6
TCGA-67-3771-01A
0 years, female, black or african american, stage:Stage IA, alive, 610 days
191.5
TCGA-75-6206-01A
male, stage:Stage IB, alive, 2590 days
191.3
TCGA-55-8205-01A
0 years, female, white, stage:Stage IIA, alive, 599 days
191.2
TCGA-NJ-A55A-01A
0 years, female, white, stage:Stage IB, alive, 15 days
190.9
TCGA-86-7714-01A
0 years, female, black or african american, stage:Stage IIIA, dead, 625 days
190.6
TCGA-49-4501-01A
0 years, female, white, stage:Stage IB, dead, 1421 days
190.3
TCGA-L9-A743-01A
0 years, male, black or african american, stage:Stage IIA, alive, 664 days
190.3
TCGA-97-8547-01A
0 years, female, stage:Stage IIIA, alive, 657 days
189.3
TCGA-49-AARR-01A
0 years, male, black or african american, stage:Stage IA, alive, 4992 days
189.1
TCGA-05-4403-01A
0 years, male, stage:Stage IB, alive, 578 days
189.0
TCGA-95-8494-01A
0 years, male, white, stage:Stage IIA, alive, 84 days
188.7
TCGA-91-6828-01A
0 years, male, white, stage:Stage IA, alive, 323 days
188.4
TCGA-55-7995-01A
0 years, female, white, stage:Stage IA, alive, 889 days
188.3
TCGA-44-7662-01A
0 years, male, white, stage:Stage IB, alive, 218 days
188.2
TCGA-62-A472-01A
0 years, male, white, stage:Stage IIB, alive, 910 days
188.0
TCGA-93-A4JO-01A
0 years, male, white, stage:Stage IA, dead, 33 days
187.6
TCGA-62-A46Y-01A
0 years, female, white, stage:Stage IIIA, dead, 414 days
187.5
TCGA-91-6848-01A
0 years, male, white, stage:Stage IIIA, alive, 224 days
187.1
TCGA-49-6744-01A
0 years, female, white, stage:Stage IIA, alive, 1683 days
187.1
TCGA-55-7574-01A
0 years, female, white, stage:Stage IB, dead, 995 days
186.9
TCGA-44-3919-01A
0 years, female, white, stage:Stage IA, dead, 1026 days
186.9
TCGA-55-8511-01A
0 years, female, white, stage:Stage IB, alive, 552 days
186.8
TCGA-38-4628-01A
0 years, female, white, stage:Stage IIB, dead, 1492 days
186.7
TCGA-05-4384-01A
0 years, male, stage:Stage IIIA, alive, 426 days
186.4
TCGA-49-6743-01A
0 years, female, white, stage:Stage IIIA, alive, 1621 days
185.6
TCGA-78-7167-01A
0 years, male, white, stage:Stage IV, dead, 2681 days
185.5
TCGA-38-7271-01A
0 years, female, white, stage:Stage IA, dead, 800 days
185.4
TCGA-44-7667-01A
0 years, female, white, stage:Stage IIB, alive, 1097 days
185.4
TCGA-55-6978-01A
0 years, male, white, stage:Stage IIA, dead, 176 days
185.3
TCGA-44-4112-01A
0 years, female, white, stage:Stage IB, dead, 808 days
184.3
TCGA-99-7458-01A
0 years, female, white, stage:Stage IIIA, alive, 747 days
184.0
TCGA-73-4676-01A
0 years, male, white, stage:Stage IIA, dead, 281 days
183.9
TCGA-50-7109-01A
0 years, male, white, stage:Stage IA, dead, 308 days
183.9
TCGA-55-8092-01A
0 years, male, white, stage:Stage IIB, dead, 154 days
183.7
TCGA-49-AARO-01A
0 years, female, black or african american, stage:Stage IA, alive, 3759 days
183.6
TCGA-44-6774-01A
0 years, female, white, stage:Stage IIIA, alive, 658 days
183.4
TCGA-44-7660-01A
0 years, male, white, stage:Stage IB, alive, 592 days
183.4
TCGA-91-7771-01A
0 years, male, white, stage:Stage IIB, alive, 492 days
182.6
TCGA-05-4422-01A
0 years, male, stage:Stage IB, alive, 365 days
182.4
TCGA-49-4505-01A
0 years, female, white, stage:Stage IIB, dead, 428 days
182.3
TCGA-50-8460-01A
0 years, male, white, stage:Stage IA, alive, 829 days
182.1
TCGA-69-8254-01A
0 years, male, white, stage:'--, alive, 409 days
182.1
TCGA-69-7763-01A
0 years, male, white, stage:Stage IA, alive, 690 days
181.6
TCGA-44-3917-01A
0 years, female, white, stage:Stage IB, alive, 1183 days
180.9
TCGA-05-4426-01A
0 years, male, stage:Stage IB, alive, 791 days
180.6
TCGA-69-7760-01A
0 years, male, white, stage:Stage IIB, alive, 202 days
180.5
TCGA-L4-A4E5-01A
0 years, female, white, stage:Stage I, alive, 578 days
180.4
TCGA-38-4625-01A
0 years, female, white, stage:Stage IB, alive, 2973 days
180.4
TCGA-55-7911-01A
0 years, female, white, stage:Stage IA, alive, 537 days
180.3
TCGA-55-7816-01A
0 years, female, white, stage:Stage IV, dead, 468 days
180.2
TCGA-55-A494-01A
0 years, female, white, stage:Stage IB, alive, 481 days
179.9
TCGA-55-6980-01A
0 years, male, white, stage:Stage IA, alive, 2109 days
179.8
TCGA-75-6214-01A
female, stage:Stage IIIA, dead, 1115 days
179.7
TCGA-55-6985-01A
0 years, female, white, stage:Stage IB, alive, 1233 days
179.7
TCGA-49-6767-01A
0 years, female, white, stage:Stage IIB, alive, 677 days
179.2
TCGA-J2-A4AG-01A
0 years, female, white, stage:Stage IA, alive, 988 days
178.7
TCGA-86-7955-01A
0 years, male, white, stage:Stage IB, alive, 1072 days
178.6
TCGA-50-6593-01A
0 years, female, white, stage:Stage IIIA, dead, 336 days
177.8
TCGA-99-AA5R-01A
0 years, female, black or african american, stage:Stage IA, alive, 658 days
176.9
TCGA-91-A4BC-01A
0 years, male, white, stage:Stage IIA, alive, 44 days
176.9
TCGA-93-7348-01A
0 years, female, white, stage:Stage IA, alive, 531 days
176.3
TCGA-91-6831-01A
0 years, male, white, stage:Stage IB, alive, 310 days
176.2
TCGA-86-8279-01A
0 years, male, white, stage:Stage IIA, alive, 949 days
175.7
TCGA-35-4122-01A
0 years, male, white, stage:Stage IA, alive, 225 days
175.6
TCGA-97-A4M2-01A
0 years, male, white, stage:Stage IA, alive, 624 days
175.1
TCGA-38-A44F-01A
0 years, male, white, stage:Stage IB, alive, 133 days
175.1
TCGA-MP-A4T4-01A
0 years, female, white, stage:Stage IIB, dead, 2617 days
174.9
TCGA-55-8096-01A
0 years, female, white, stage:Stage IB, dead, 719 days
174.6
TCGA-55-7576-01A
0 years, male, black or african american, stage:Stage IB, alive, 670 days
174.5
TCGA-05-4402-01A
0 years, female, stage:Stage IV, dead, 244 days
174.4
TCGA-55-8508-01A
0 years, female, black or african american, stage:Stage IIA, alive, 617 days
173.8
TCGA-55-7227-01A
0 years, male, white, stage:Stage IIIA, dead, 952 days
172.8
TCGA-71-6725-01A
0 years, female, asian, stage:Stage IB, alive, 256 days
172.7
TCGA-MP-A4SY-01A
0 years, male, white, stage:Stage IIB, dead, 1501 days
172.6
TCGA-55-8206-01A
0 years, male, white, stage:Stage IA, alive, 888 days
172.4
TCGA-69-7978-01A
0 years, male, white, stage:Stage IIB, alive, 134 days
172.1
TCGA-50-8459-01A
0 years, male, white, stage:Stage IIB, alive, 1119 days
171.9
TCGA-55-7726-01A
0 years, female, white, stage:Stage IA, alive, 652 days
171.8
TCGA-64-5775-01A
0 years, male, white, stage:Stage IIIA, dead, 62 days
171.3
TCGA-55-6987-01A
0 years, male, white, stage:Stage IA, alive, 2137 days
171.2
TCGA-97-7941-01A
0 years, female, white, stage:Stage IA, alive, 484 days
170.7
TCGA-55-8614-01A
0 years, male, white, stage:Stage IB, alive, 536 days
170.6
TCGA-86-8358-01A
0 years, male, white, stage:Stage IB, alive, 653 days
170.6
TCGA-55-7725-01A
0 years, female, white, stage:Stage IA, alive, 442 days
170.4
TCGA-55-7283-01A
0 years, female, white, stage:Stage IIIA, alive, 609 days
170.0
TCGA-55-8301-01A
0 years, male, white, stage:Stage IB, alive, 534 days
169.4
TCGA-78-7149-01A
0 years, male, white, stage:Stage IIIB, alive, 3940 days
169.3
TCGA-50-5939-01A
0 years, male, white, stage:Stage IB, dead, 460 days
168.6
TCGA-97-8179-01A
0 years, male, white, stage:Stage IA, alive, 435 days
168.4
TCGA-05-4415-01A
0 years, male, stage:Stage IIIB, dead, 91 days
168.3
TCGA-86-8075-01A
0 years, female, white, stage:Stage IB, dead, 694 days
168.2
TCGA-78-8648-01A
0 years, female, stage:Stage IIB, dead, 1209 days
168.0
TCGA-05-4433-01A
0 years, male, stage:Stage IB, alive, 730 days
168.0
TCGA-62-8395-01A
0 years, female, white, stage:Stage IIB, alive, 1216 days
167.7
TCGA-44-6777-01A
0 years, female, white, stage:Stage IB, dead, 987 days
167.5
TCGA-93-A4JP-01A
0 years, male, asian, stage:Stage IV, alive, 578 days
167.5
TCGA-95-7039-01A
0 years, female, white, stage:Stage IIB, alive, 1272 days
167.2
TCGA-L4-A4E6-01A
0 years, male, white, stage:Stage IA, alive, 435 days
167.0
TCGA-55-8513-01A
0 years, female, white, stage:Stage IIB, alive, 791 days
166.5
TCGA-55-8207-01A
0 years, male, white, stage:Stage IB, alive, 977 days
165.7
TCGA-49-AAR3-01A
0 years, male, black or african american, stage:Stage IIB, alive, 1893 days
165.5
TCGA-L9-A8F4-01A
0 years, female, black or african american, stage:Stage IB, alive, 476 days
164.8
TCGA-97-8172-01A
0 years, female, white, stage:Stage IB, alive, 545 days
164.7
TCGA-86-A456-01A
0 years, female, asian, stage:Stage IA, alive, 896 days
164.7
TCGA-97-7937-01A
0 years, male, white, stage:Stage IB, alive, 564 days
164.2
TCGA-67-3774-01A
0 years, female, white, stage:Stage IB, alive, 385 days
163.6
TCGA-55-A57B-01A
0 years, female, black or african american, stage:Stage IA, alive, 546 days
163.4
TCGA-44-6148-01A
0 years, male, white, stage:Stage IA, alive, 704 days
163.4
TCGA-62-A46O-01A
0 years, female, white, stage:Stage IB, dead, 1454 days
162.7
TCGA-05-4418-01A
0 years, male, stage:Stage IIIA, dead, 274 days
162.3
TCGA-44-8117-01A
0 years, female, white, stage:Stage IB, alive, 385 days
162.2
TCGA-55-7727-01A
0 years, male, white, stage:Stage IIIA, alive, 119 days
160.9
TCGA-67-3772-01A
0 years, female, white, stage:Stage IB, alive, 573 days
160.4
TCGA-44-2661-01A
0 years, female, white, stage:Stage IA, alive, 1159 days
160.2
TCGA-86-A4P8-01A
0 years, female, white, stage:Stage IIIA, alive, 805 days
160.0
TCGA-44-A4SS-01A
0 years, male, white, stage:Stage IA, alive, 415 days
159.7
TCGA-86-8280-01A
0 years, female, white, stage:Stage IIA, alive, 701 days
159.5
TCGA-55-8089-01A
0 years, male, white, stage:Stage IA, dead, 702 days
159.1
TCGA-78-7143-01A
0 years, female, white, stage:Stage IB, dead, 4961 days
158.8
TCGA-55-A4DF-01A
0 years, male, white, stage:Stage IA, dead, 440 days
158.7
TCGA-44-8119-01A
0 years, male, white, stage:Stage IIB, alive, 285 days
158.2
TCGA-44-6147-01A
0 years, female, white, stage:Stage IA, alive, 845 days
157.6
TCGA-97-8171-01A
0 years, male, asian, stage:Stage IV, alive, 568 days
157.1
TCGA-55-7573-01A
0 years, female, white, stage:Stage IA, alive, 487 days
157.1
TCGA-69-7764-01A
0 years, male, white, stage:Stage IA, alive, 414 days
157.0
TCGA-91-6829-01A
0 years, male, white, stage:Stage IB, dead, 1258 days
156.7
TCGA-L9-A7SV-01A
0 years, male, black or african american, stage:Stage IIA, alive, 565 days
156.4
TCGA-55-8619-01A
0 years, female, white, stage:Stage IIB, alive, 416 days
156.0
TCGA-05-4424-01A
0 years, male, stage:Stage IIB, alive, 913 days
156.0
TCGA-91-6835-01A
0 years, female, white, stage:Stage IA, alive, 79 days
156.0
TCGA-78-7158-01A
0 years, female, white, stage:Stage IIIB, dead, 179 days
156.0
TCGA-86-7713-01A
0 years, male, white, stage:Stage IIA, alive, 1157 days
155.9
TCGA-50-5049-01A
0 years, male, white, stage:Stage IA, alive, 3094 days
155.9
TCGA-55-8510-01A
0 years, female, white, stage:Stage IB, alive, 539 days
155.9
TCGA-05-4250-01A
0 years, female, stage:Stage IIIA, dead, 121 days
154.6
TCGA-91-6830-01A
0 years, female, white, stage:Stage IIA, alive, 60 days
154.5
TCGA-55-1592-01A
0 years, male, white, stage:Stage IA, dead, 701 days
154.1
TCGA-55-8204-01A
0 years, female, white, stage:Stage IB, alive, 515 days
154.1
TCGA-J2-8192-01A
0 years, female, white, stage:Stage IIA, alive, 739 days
152.9
TCGA-44-2662-01A
0 years, male, white, stage:Stage IB, alive, 1280 days
152.5
TCGA-67-3770-01A
0 years, female, white, stage:Stage IA, alive, 610 days
152.1
TCGA-50-5942-01A
0 years, female, white, stage:Stage IA, alive, 1847 days
151.2
TCGA-44-A47G-01A
0 years, female, white, stage:Stage IA, alive, 351 days
150.9
TCGA-55-8512-01A
0 years, male, white, stage:Stage IV, dead, 607 days
150.7
TCGA-69-A59K-01A
0 years, female, black or african american, stage:Stage IIB, alive, 591 days
150.6
TCGA-44-6778-01A
0 years, male, black or african american, stage:Stage IA, alive, 1864 days
150.6
TCGA-86-8055-01A
0 years, male, white, stage:Stage IIA, dead, 124 days
150.5
TCGA-44-6146-01A
0 years, male, white, stage:Stage IIB, alive, 728 days
150.2
TCGA-67-6217-01A
0 years, female, white, stage:Stage IIA, alive, 422 days
149.3
TCGA-64-5779-01A
0 years, male, white, stage:Stage IIIA, alive, 864 days
148.2
TCGA-55-6971-01A
0 years, female, white, stage:Stage IB, alive, 1400 days
147.7
TCGA-S2-AA1A-01A
0 years, female, black or african american, stage:Stage IA, alive, 513 days
147.4
TCGA-97-A4M7-01A
0 years, male, white, stage:Stage IA, alive, 629 days
147.2
TCGA-49-4490-01A
0 years, female, white, stage:Stage IIIA, dead, 385 days
146.6
TCGA-44-3396-01A
0 years, female, white, stage:Stage IIIA, alive, 1130 days
146.0
TCGA-55-A493-01A
0 years, female, white, stage:Stage IB, alive, 28 days
145.6
TCGA-05-4382-01A
0 years, male, stage:Stage IB, alive, 607 days
145.5
TCGA-05-5428-01A
0 years, male, stage:Stage IIA, alive, 670 days
144.7
TCGA-91-6847-01A
0 years, female, white, stage:Stage IB, alive, 842 days
144.7
TCGA-93-A4JN-01A
0 years, male, white, stage:Stage IV, alive, 718 days
144.6
TCGA-95-7948-01A
0 years, female, white, stage:Stage IB, alive, 476 days
142.6
TCGA-L9-A444-01A
0 years, female, white, stage:Stage IA, alive, 307 days
141.9
TCGA-J2-A4AE-01A
0 years, female, white, stage:Stage IA, alive, 1079 days
141.8
TCGA-J2-A4AD-01A
0 years, female, white, stage:Stage IA, dead, 550 days
141.0
TCGA-73-4662-01A
0 years, female, white, stage:Stage IA, alive, 2515 days
140.8
TCGA-49-AAR4-01A
0 years, male, black or african american, stage:Stage IIIA, dead, 879 days
140.7
TCGA-44-2657-01A
0 years, female, white, stage:Stage IB, alive, 1351 days
140.3
TCGA-55-8085-01A
0 years, male, white, stage:Stage IA, alive, 904 days
140.3
TCGA-55-8302-01A
0 years, male, white, stage:Stage IB, alive, 478 days
139.6
TCGA-97-A4M1-01A
0 years, female, white, stage:Stage IA, alive, 601 days
139.2
TCGA-49-AAR2-01A
0 years, male, black or african american, stage:Stage IB, alive, 2224 days
139.1
TCGA-44-6775-01A
0 years, female, white, stage:Stage IB, alive, 705 days
138.8
TCGA-62-8399-01A
0 years, male, white, stage:Stage IIIA, alive, 2696 days
138.6
TCGA-44-2659-01A
0 years, female, white, stage:Stage IIB, alive, 1367 days
138.1
TCGA-44-5645-01A
0 years, female, black or african american, stage:Stage IA, alive, 852 days
137.6
TCGA-86-7711-01A
0 years, male, white, stage:Stage IIA, dead, 1046 days
137.0
TCGA-O1-A52J-01A
0 years, female, white, stage:Stage IA, dead, 1798 days
136.6
TCGA-55-6712-01A
0 years, male, white, stage:Stage IIA, dead, 171 days
136.3
TCGA-97-8552-01A
0 years, female, white, stage:Stage I, alive, 626 days
136.2
TCGA-55-7914-01A
0 years, female, white, stage:Stage IIA, dead, 187 days
136.0
TCGA-97-7554-01A
0 years, female, white, stage:Stage IIIA, alive, 775 days
134.9
TCGA-50-8457-01A
0 years, female, black or african american, stage:Stage IA, alive, 1125 days
134.5
TCGA-86-6851-01A
0 years, female, white, stage:Stage IIA, alive, 179 days
133.7
TCGA-62-A46R-01A
0 years, female, white, stage:Stage IB, dead, 1725 days
133.6
TCGA-73-4668-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 467 days
132.5
TCGA-44-A4SU-01A
0 years, female, white, stage:Stage IA, dead, 409 days
132.4
TCGA-97-8174-01A
0 years, male, white, stage:Stage IIA, dead, 164 days
131.6
TCGA-44-A479-01A
0 years, female, black or african american, stage:Stage IB, alive, 486 days
131.4
TCGA-97-7552-01A
0 years, male, white, stage:Stage IB, alive, 1932 days
130.9
TCGA-55-6642-01A
0 years, male, white, stage:Stage IB, alive, 2449 days
128.8
TCGA-55-7907-01A
0 years, male, white, stage:Stage IIA, dead, 343 days
128.4
TCGA-50-6673-01A
0 years, female, white, stage:Stage I, dead, 22 days
127.7
TCGA-75-7025-01A
male, stage:Stage IB, alive, 3305 days
126.5
TCGA-55-7994-01A
0 years, male, white, stage:Stage IIB, alive, 603 days
126.3
TCGA-50-5932-01A
0 years, male, white, stage:Stage IIB, dead, 1235 days
126.1
TCGA-55-6981-01A
0 years, female, white, stage:Stage IIIA, dead, 1379 days
121.5
TCGA-91-6840-01A
0 years, female, white, stage:Stage IA, alive, 372 days
116.3
TCGA-50-5946-01A
0 years, male, white, stage:Stage IA, alive, 1617 days
116.3
TCGA-55-A490-01A
0 years, male, white, stage:Stage IIA, dead, 99 days
113.9
TCGA-38-6178-01A
0 years, female, white, stage:Stage IIIA, alive, 448 days
109.7
TCGA-91-8496-01A
0 years, female, white, stage:Stage IB, alive, 505 days
108.5
TCGA-55-7724-01A
0 years, female, white, stage:Stage IB, alive, 705 days
107.7
TCGA-53-7626-01A
0 years, female, white, stage:Stage IIA, dead, 929 days
107.2
TCGA-55-A4DG-01A
0 years, male, white, stage:Stage IA, alive, 608 days
100.9
TCGA-86-8668-01A
0 years, female, white, stage:Stage IA, alive, 423 days
100.0
TCGA-MP-A4T6-01A
0 years, female, white, stage:Stage IIIA, dead, 1790 days
98.7
TCGA-69-7761-01A
0 years, male, white, stage:Stage IB, alive, 186 days
97.2
TCGA-78-7633-01A
0 years, male, white, stage:Stage IB, dead, 1528 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC61B is not prognostic in Lung Adenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
138.2
Number of samples
105
Samples
Sample
Description
TPM
L612
0 years, female, stage:Stage IIIA, alive, 2410 days
300.0
L543
0 years, male, stage:Stage IA, alive, 2711 days
252.0
L688
0 years, male, stage:Stage IIIA, dead, 789 days
225.5
L842
0 years, female, stage:Stage IB, alive, 2005 days
215.0
L620
0 years, female, stage:Stage IIIA, dead, 338 days
208.1
L545
0 years, female, stage:Stage IA, alive, 2874 days
207.5
L567
0 years, female, stage:Stage IIIA, dead, 1299 days
207.3
L603
0 years, female, stage:Stage IB, dead, 972 days
202.8
L599
0 years, male, stage:Stage IB, dead, 2083 days
197.2
L887
0 years, male, stage:Stage IA, dead, 374 days
191.3
L585
0 years, female, stage:Stage IIA, dead, 402 days
188.9
L703
0 years, male, stage:Stage IIA, dead, 1137 days
183.0
L484
0 years, female, stage:Stage IA, alive, 2895 days
178.7
L638
0 years, male, stage:Stage IA, alive, 2076 days
176.8
L752
0 years, male, stage:Stage IIIA, alive, 1647 days
175.6
L808
0 years, female, stage:Stage IA, alive, 3001 days
175.1
L400
0 years, male, stage:Stage IIA, dead, 1233 days
174.8
L557
0 years, female, stage:Stage IB, alive, 2580 days
172.1
L613
0 years, male, stage:Stage IIIA, dead, 19 days
171.2
L607
0 years, male, stage:Stage IB, alive, 2572 days
169.5
L656
0 years, male, stage:Stage IA, alive, 2227 days
168.4
L493
0 years, female, stage:Stage IIB, alive, 2945 days
167.7
L885
0 years, female, stage:Stage IA, alive, 1618 days
167.3
L673
0 years, female, stage:Stage IA, dead, 568 days
166.2
L800
0 years, female, stage:Stage IA, dead, 2417 days
164.3
L662
0 years, male, stage:Stage IA, dead, 865 days
163.9
L710
0 years, female, stage:Stage IIA, alive, 1775 days
162.9
L663
0 years, female, stage:Stage IB, alive, 2018 days
162.6
L551
0 years, male, stage:Stage IA, alive, 2924 days
162.2
L446
0 years, female, stage:Stage IIB, dead, 415 days
161.1
L827
0 years, male, stage:Stage IIB, dead, 1105 days
158.5
L504
0 years, female, stage:Stage IA, dead, 1295 days
155.1
L617
0 years, male, stage:Stage IIIA, dead, 238 days
154.9
L616
0 years, male, stage:Stage IA, dead, 410 days
153.6
L764
0 years, male, stage:Stage IIIA, alive, 1684 days
152.1
L569
0 years, female, stage:Stage IA, alive, 2531 days
151.5
L725
0 years, female, stage:Stage IA, alive, 1830 days
151.4
L532
0 years, female, stage:Stage IA, dead, 301 days
149.9
L731
0 years, female, stage:Stage IA, dead, 964 days
148.6
L832
0 years, female, stage:Stage IA, alive, 2145 days
145.4
L546
0 years, male, stage:Stage IA, dead, 973 days
145.2
L530
0 years, female, stage:Stage IIA, dead, 308 days
145.2
L802
0 years, female, stage:Stage IA, dead, 773 days
144.8
L810
0 years, female, stage:Stage IIIA, dead, 625 days
144.1
L782
0 years, female, stage:Stage IIB, alive, 3371 days
143.8
L773
0 years, female, stage:Stage IV, dead, 311 days
143.4
L874
0 years, female, stage:Stage IIIA, alive, 1733 days
142.5
L531
0 years, male, stage:Stage IB, dead, 928 days
141.0
L605
0 years, female, stage:Stage IA, alive, 2460 days
140.7
L596
0 years, female, stage:Stage IA, alive, 2319 days
140.2
L865
0 years, female, stage:Stage IIB, alive, 1927 days
135.5
L619
0 years, female, stage:Stage IIIA, dead, 1905 days
135.2
L606
0 years, male, stage:Stage IA, alive, 2336 days
135.2
L877
0 years, female, stage:Stage IA, alive, 1599 days
134.6
L565
0 years, female, stage:Stage IB, dead, 543 days
133.7
L828
0 years, female, stage:Stage IIB, alive, 2222 days
132.6
L621
0 years, female, stage:Stage IIIA, dead, 1487 days
130.6
L746
0 years, female, stage:Stage IIIA, dead, 594 days
128.4
L791
0 years, female, stage:Stage IIIA, dead, 368 days
128.3
L838
0 years, female, stage:Stage IA, dead, 1005 days
128.0
L683
0 years, female, stage:Stage IIA, dead, 612 days
127.4
L458
0 years, female, stage:Stage IA, dead, 223 days
124.8
L601
0 years, male, stage:Stage IB, dead, 2068 days
124.7
L738
0 years, female, stage:Stage IB, dead, 1314 days
124.0
L682
0 years, female, stage:Stage IIB, dead, 840 days
123.0
L593
0 years, male, stage:Stage IA, dead, 2436 days
122.8
L541
0 years, female, stage:Stage IIIA, dead, 915 days
122.3
L879
0 years, male, stage:Stage IV, dead, 873 days
118.9
L766
0 years, male, stage:Stage IB, alive, 1793 days
117.2
L678
0 years, female, stage:Stage IB, dead, 1114 days
117.0
L749
0 years, female, stage:Stage IIIA, dead, 189 days
115.7
L413
0 years, female, stage:Stage IIIA, dead, 313 days
115.5
L561
0 years, female, stage:Stage IA, alive, 2543 days
114.8
L566
0 years, male, stage:Stage IB, alive, 2489 days
114.6
L462
0 years, male, stage:Stage IIIA, dead, 568 days
112.3
L404
0 years, female, stage:Stage IIA, dead, 2318 days
110.4
L401
0 years, male, stage:Stage IIIA, dead, 1888 days
110.2
L871
0 years, male, stage:Stage IB, dead, 873 days
109.8
L873
0 years, female, stage:Stage IA, alive, 1740 days
107.5
L440
0 years, male, stage:Stage IIB, dead, 651 days
107.2
L890
0 years, female, stage:Stage IIB, dead, 1264 days
106.7
L728
0 years, male, stage:Stage IIB, dead, 1128 days
106.3
L630
0 years, female, stage:Stage IA, dead, 1733 days
104.6
L511
0 years, female, stage:Stage IIIA, alive, 2942 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC61B is not prognostic in Lung Squamous Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
206.5
Number of samples
489
Samples
Sample
Description
TPM
TCGA-77-7140-01A
0 years, female, white, stage:Stage IIB, dead, 632 days
557.5
TCGA-43-7658-01A
0 years, female, white, stage:Stage IA, dead, 2378 days
493.4
TCGA-NC-A5HO-01A
0 years, female, white, stage:Stage IIIA, alive, 1336 days
483.1
TCGA-94-A5I4-01A
0 years, male, white, stage:Stage IIA, alive, 491 days
464.3
TCGA-77-8144-01A
0 years, male, stage:Stage IB, alive, 833 days
434.9
TCGA-18-3414-01A
0 years, male, asian, stage:Stage IV, dead, 716 days
424.9
TCGA-22-5483-01A
0 years, male, white, stage:Stage IIA, dead, 573 days
416.6
TCGA-33-AAS8-01A
0 years, female, black or african american, stage:Stage IA, dead, 1114 days
410.7
TCGA-37-A5EL-01A
0 years, male, white, stage:Stage IIB, dead, 1143 days
395.8
TCGA-37-4129-01A
0 years, female, white, stage:Stage IA, alive, 242 days
381.9
TCGA-58-A46M-01A
0 years, male, white, stage:Stage IIB, alive, 1072 days
372.1
TCGA-37-3789-01A
0 years, male, white, stage:Stage IB, alive, 13 days
365.2
TCGA-21-5787-01A
0 years, male, black or african american, stage:Stage IIIA, dead, 329 days
360.3
TCGA-63-A5MT-01A
0 years, male, stage:Stage IIB, alive, 498 days
356.6
TCGA-58-8391-01A
0 years, female, white, stage:Stage IIIA, alive, 2167 days
342.5
TCGA-63-A5MM-01A
0 years, female, stage:Stage IIB, dead, 456 days
341.5
TCGA-77-7335-01A
0 years, female, white, stage:Stage IIIB, dead, 2133 days
338.2
TCGA-33-AASB-01A
0 years, male, black or african american, stage:Stage IB, dead, 211 days
335.7
TCGA-85-A4CN-01A
0 years, female, white, stage:Stage IIB, alive, 1038 days
334.0
TCGA-33-AASL-01A
0 years, female, black or african american, stage:Stage IA, dead, 826 days
332.9
TCGA-37-5819-01A
0 years, male, white, stage:Stage IIIA, alive, 103 days
331.1
TCGA-33-A5GW-01A
0 years, male, white, stage:Stage IIA, dead, 9 days
330.0
TCGA-39-5036-01A
0 years, male, white, stage:Stage IB, alive, 2165 days
326.6
TCGA-85-8479-01A
0 years, male, white, stage:Stage IA, alive, 468 days
326.5
TCGA-52-7812-01A
0 years, male, white, stage:'--, dead, 835 days
325.4
TCGA-90-7769-01A
0 years, male, white, stage:Stage IIB, alive, 358 days
318.7
TCGA-66-2754-01A
0 years, male, stage:Stage IIIA, alive, 61 days
309.8
TCGA-46-3765-01A
0 years, female, white, stage:Stage IA, alive, 405 days
309.0
TCGA-33-4533-01A
0 years, female, black or african american, stage:Stage IB, alive, 4068 days
308.7
TCGA-NC-A5HK-01A
0 years, female, white, stage:Stage IIB, alive, 128 days
308.3
TCGA-77-7465-01A
0 years, male, white, stage:Stage IIA, alive, 990 days
307.3
TCGA-85-A5B5-01A
0 years, male, white, stage:Stage IA, alive, 111 days
306.5
TCGA-33-4586-01A
0 years, male, white, stage:Stage IIIA, dead, 428 days
306.3
TCGA-46-3768-01A
0 years, male, white, stage:Stage IIIA, dead, 299 days
304.7
TCGA-LA-A7SW-01A
0 years, male, black or african american, stage:Stage IIIA, dead, 408 days
302.7
TCGA-77-7139-01A
0 years, male, white, stage:Stage IIB, alive, 4261 days
300.5
TCGA-51-4079-01A
0 years, female, black or african american, stage:Stage IB, dead, 12 days
298.8
TCGA-43-3920-01A
0 years, male, white, stage:Stage IB, alive, 1007 days
296.9
TCGA-22-5482-01A
0 years, male, white, stage:Stage IB, dead, 357 days
296.0
TCGA-77-8153-01A
0 years, female, stage:Stage IB, alive, 1992 days
295.1
TCGA-77-8128-01A
0 years, male, stage:Stage IIIA, dead, 1150 days
294.0
TCGA-NC-A5HP-01A
0 years, male, white, stage:Stage IV, dead, 770 days
292.4
TCGA-58-A46N-01A
0 years, male, white, stage:Stage IB, alive, 910 days
291.2
TCGA-37-3792-01A
0 years, male, white, stage:Stage IB, alive, 12 days
291.0
TCGA-63-6202-01A
male, stage:Stage IIA, alive, 1602 days
290.3
TCGA-33-4589-01A
0 years, female, white, stage:Stage IIB, dead, 47 days
286.5
TCGA-85-8580-01A
0 years, female, white, stage:Stage IB, alive, 1113 days
286.5
TCGA-85-A4CL-01A
0 years, male, white, stage:Stage IA, dead, 921 days
286.4
TCGA-39-5027-01A
0 years, male, white, stage:Stage IB, alive, 3108 days
285.7
TCGA-85-8070-01A
0 years, male, white, stage:Stage IB, alive, 960 days
285.2
TCGA-NK-A5CR-01A
0 years, male, stage:Stage IB, alive, 2542 days
284.8
TCGA-85-8071-01A
0 years, male, white, stage:Stage IIA, alive, 815 days
284.4
TCGA-NC-A5HD-01A
0 years, male, white, stage:Stage IIB, dead, 2 days
284.1
TCGA-63-A5MP-01A
0 years, male, stage:Stage IIB, alive, 769 days
284.1
TCGA-63-A5ML-01A
0 years, male, stage:Stage IB, alive, 1386 days
281.8
TCGA-NC-A5HE-01A
0 years, male, white, stage:Stage IIB, alive, 2336 days
280.8
TCGA-18-3415-01A
0 years, male, stage:Stage IB, dead, 2803 days
280.1
TCGA-56-8083-01A
0 years, male, white, stage:Stage IB, alive, 150 days
280.1
TCGA-39-5024-01A
0 years, female, white, stage:Stage IIIA, alive, 2510 days
279.9
TCGA-18-3416-01A
0 years, male, stage:Stage IIB, dead, 973 days
278.5
TCGA-85-A4JC-01A
0 years, male, white, stage:Stage IIA, dead, 604 days
278.1
TCGA-85-7950-01A
0 years, male, white, stage:Stage IB, alive, 576 days
278.1
TCGA-94-8490-01A
0 years, male, white, stage:Stage IIB, alive, 153 days
277.6
TCGA-60-2713-01A
0 years, male, white, stage:Stage IB, alive, 1731 days
277.5
TCGA-66-2770-01A
0 years, male, stage:Stage IB, alive, 700 days
277.5
TCGA-66-2759-01A
0 years, male, stage:Stage IIIA, alive, 762 days
275.2
TCGA-66-2800-01A
0 years, male, stage:Stage IIIB, alive, 1492 days
273.7
TCGA-77-7337-01A
0 years, male, white, stage:Stage IIB, dead, 3253 days
273.0
TCGA-37-A5EN-01A
0 years, male, white, stage:Stage IIIB, alive, 660 days
271.2
TCGA-85-A512-01A
0 years, male, white, stage:Stage IIA, alive, 465 days
269.6
TCGA-85-7844-01A
0 years, male, white, stage:Stage IB, alive, 911 days
269.4
TCGA-37-3783-01A
0 years, male, white, stage:Stage IIIA, alive, 122 days
267.3
TCGA-77-8156-01A
0 years, male, stage:Stage IB, alive, 1106 days
267.1
TCGA-98-A53D-01A
0 years, male, white, stage:Stage IIB, dead, 645 days
265.9
TCGA-63-A5MJ-01A
0 years, male, stage:Stage IIB, alive, 1824 days
265.3
TCGA-52-7811-01A
0 years, male, white, stage:Stage IB, dead, 266 days
265.0
TCGA-60-2710-01A
0 years, female, white, stage:Stage IIA, alive, 2024 days
263.9
TCGA-58-8390-01A
0 years, male, white, stage:Stage IIA, alive, 911 days
263.7
TCGA-85-7698-01A
0 years, male, white, stage:Stage IA, alive, 952 days
262.8
TCGA-NC-A5HR-01A
0 years, female, white, stage:Stage IIA, alive, 1244 days
262.7
TCGA-34-2596-01A
0 years, male, white, stage:Stage IIB, dead, 80 days
262.4
TCGA-98-A53I-01A
0 years, male, white, stage:Stage IIA, alive, 565 days
261.3
TCGA-92-8063-01A
0 years, male, white, stage:Stage IIIA, alive, 122 days
261.1
TCGA-43-6770-01A
0 years, female, black or african american, stage:Stage IB, alive, 653 days
261.0
TCGA-22-0944-01A
0 years, male, white, stage:Stage IB, dead, 223 days
259.2
TCGA-39-5021-01A
0 years, male, white, stage:Stage IB, dead, 2086 days
257.4
TCGA-66-2766-01A
0 years, male, stage:Stage IIIA, alive, 31 days
256.9
TCGA-98-A53J-01A
0 years, male, white, stage:Stage IB, alive, 630 days
256.3
TCGA-21-1072-01A
0 years, male, white, stage:Stage IB, alive, 3016 days
256.3
TCGA-LA-A446-01A
0 years, male, white, stage:Stage IA, alive, 401 days
255.8
TCGA-NK-A5D1-01A
0 years, male, white, stage:Stage IIA, alive, 511 days
255.7
TCGA-85-7696-01A
0 years, male, white, stage:Stage IA, alive, 1111 days
255.5
TCGA-37-4133-01A
0 years, male, white, stage:Stage IIIA, alive, 238 days
255.3
TCGA-98-8021-01A
0 years, female, white, stage:Stage IA, alive, 937 days
255.1
TCGA-43-2576-01A
0 years, female, white, stage:Stage IIIA, alive, 1223 days
255.1
TCGA-66-2791-01A
0 years, male, stage:Stage IIIB, dead, 153 days
254.6
TCGA-66-2727-01A
0 years, female, stage:Stage IB, dead, 516 days
254.5
TCGA-66-2787-01A
0 years, male, stage:Stage IA, alive, 1217 days
252.8
TCGA-22-4609-01A
0 years, male, white, stage:Stage IA, dead, 291 days
252.7
TCGA-22-5473-01A
0 years, male, white, stage:'--, dead, 1933 days
252.7
TCGA-77-8131-01A
0 years, male, stage:Stage IB, dead, 383 days
252.5
TCGA-66-2794-01A
0 years, male, stage:Stage IIIB, alive, 1645 days
251.9
TCGA-66-2792-01A
0 years, male, stage:Stage IIB, alive, 913 days
251.8
TCGA-33-4583-01A
0 years, male, white, stage:Stage IA, dead, 4601 days
251.8
TCGA-22-5485-01A
0 years, female, white, stage:Stage IA, dead, 916 days
250.8
TCGA-43-8118-01A
0 years, female, white, stage:Stage IA, dead, 89 days
250.7
TCGA-56-7730-01A
0 years, male, white, stage:Stage IIA, dead, 198 days
249.8
TCGA-52-7810-01A
0 years, female, white, stage:Stage IIB, alive, 923 days
249.7
TCGA-L3-A524-01A
0 years, female, white, stage:Stage IIB, dead, 490 days
249.0
TCGA-85-8584-01A
0 years, male, white, stage:Stage IIA, dead, 383 days
247.2
TCGA-77-8133-01A
0 years, male, stage:Stage IIA, dead, 1640 days
245.7
TCGA-77-A5G3-01A
0 years, male, stage:Stage IIB, alive, 4570 days
245.5
TCGA-66-2757-01A
0 years, female, stage:Stage IA, dead, 1338 days
245.4
TCGA-77-8148-01A
0 years, male, stage:Stage IIIA, alive, 2023 days
245.1
TCGA-56-8082-01A
0 years, female, white, stage:Stage IIA, alive, 455 days
245.0
TCGA-68-7755-01A
0 years, female, white, stage:Stage IIA, alive, 83 days
244.7
TCGA-60-2695-01A
0 years, female, white, stage:Stage IB, alive, 642 days
244.4
TCGA-O2-A52Q-01A
0 years, female, white, stage:Stage III, dead, 113 days
243.5
TCGA-96-A4JL-01A
0 years, female, asian, stage:Stage IIA, alive, 842 days
243.1
TCGA-39-5039-01A
0 years, male, white, stage:Stage IIA, dead, 544 days
242.5
TCGA-98-A53A-01A
0 years, male, black or african american, stage:Stage IB, dead, 552 days
241.6
TCGA-52-7622-01A
0 years, female, white, stage:Stage IA, alive, 862 days
241.5
TCGA-21-5784-01A
0 years, female, white, stage:Stage IB, alive, 1268 days
240.9
TCGA-22-5471-01A
0 years, male, white, stage:Stage IB, alive, 1845 days
240.8
TCGA-85-A511-01A
0 years, male, white, stage:Stage IIB, dead, 455 days
240.2
TCGA-43-A475-01A
0 years, female, white, stage:Stage IIB, alive, 296 days
239.5
TCGA-39-5037-01A
0 years, male, white, stage:Stage IIA, alive, 1690 days
239.3
TCGA-33-A4WN-01A
0 years, male, white, stage:Stage IB, dead, 143 days
239.0
TCGA-68-7756-01A
0 years, male, white, stage:Stage IIIA, alive, 202 days
238.4
TCGA-37-4135-01A
0 years, male, white, stage:Stage IB, alive, 207 days
238.4
TCGA-66-2768-01A
0 years, male, stage:Stage IIB, alive, 61 days
238.0
TCGA-43-3394-01A
0 years, male, black or african american, stage:Stage IB, dead, 1190 days
237.0
TCGA-77-7338-01A
0 years, male, white, stage:Stage IB, dead, 5 days
236.8
TCGA-56-8309-01A
0 years, male, white, stage:Stage IA, alive, 428 days
236.8
TCGA-43-2578-01A
0 years, female, white, stage:Stage IA, dead, 684 days
236.8
TCGA-77-A5GF-01A
0 years, male, stage:Stage IIA, dead, 840 days
236.7
TCGA-77-8009-01A
0 years, male, stage:Stage IIB, dead, 1695 days
236.7
TCGA-85-8072-01A
0 years, male, white, stage:Stage IA, alive, 932 days
236.7
TCGA-60-2722-01A
0 years, male, white, stage:Stage IIB, alive, 908 days
236.2
TCGA-96-A4JK-01A
0 years, male, white, stage:Stage IIA, alive, 589 days
236.0
TCGA-56-A4ZJ-01A
0 years, female, white, stage:Stage IA, alive, 640 days
235.6
TCGA-56-A4BW-01A
0 years, male, white, stage:Stage IIA, alive, 585 days
234.6
TCGA-NC-A5HH-01A
0 years, male, white, stage:Stage IA, alive, 37 days
234.5
TCGA-77-8150-01A
0 years, male, stage:Stage IIIA, dead, 1655 days
234.4
TCGA-66-2756-01A
0 years, male, stage:Stage IIIB, alive, 30 days
233.5
TCGA-51-4081-01A
0 years, male, white, stage:Stage IIB, alive, 911 days
232.9
TCGA-85-8052-01A
0 years, male, white, stage:Stage IIB, alive, 734 days
232.7
TCGA-85-6798-01A
0 years, male, white, stage:Stage IIIA, dead, 195 days
231.8
TCGA-22-0940-01A
0 years, male, white, stage:Stage IIA, dead, 669 days
231.7
TCGA-56-1622-01A
0 years, male, white, stage:Stage IB, dead, 881 days
231.5
TCGA-34-5240-01A
0 years, female, white, stage:Stage IIB, alive, 1541 days
231.3
TCGA-56-A4BY-01A
0 years, male, white, stage:Stage IB, dead, 543 days
231.3
TCGA-66-2783-01A
0 years, male, stage:Stage IIIB, alive, 759 days
230.9
TCGA-22-4605-01A
0 years, female, stage:Stage IB, dead, 974 days
230.7
TCGA-NC-A5HL-01A
0 years, male, white, stage:Stage IIA, dead, 88 days
230.6
TCGA-98-A53H-01A
0 years, female, white, stage:Stage IA, alive, 618 days
230.6
TCGA-22-5472-01A
0 years, male, white, stage:Stage IB, dead, 1975 days
230.3
TCGA-90-7767-01A
0 years, male, white, stage:Stage IIB, alive, 89 days
230.3
TCGA-85-8352-01A
0 years, male, white, stage:Stage IIIA, dead, 161 days
229.7
TCGA-37-4132-01A
0 years, female, white, stage:Stage IV, alive, 227 days
229.7
TCGA-33-6737-01A
0 years, male, white, stage:Stage IIIA, dead, 601 days
229.6
TCGA-98-8020-01A
0 years, female, black or african american, stage:Stage IIIA, dead, 84 days
229.2
TCGA-22-1017-01A
0 years, male, white, stage:Stage IA, dead, 1485 days
228.9
TCGA-37-A5EM-01A
0 years, male, white, stage:Stage II, alive, 867 days
228.0
TCGA-34-5234-01A
0 years, female, white, stage:Stage IA, alive, 2271 days
226.7
TCGA-94-8035-01A
0 years, male, white, stage:Stage IIB, alive, 122 days
226.6
TCGA-33-AASJ-01A
0 years, male, black or african american, stage:Stage IB, dead, 3600 days
226.5
TCGA-85-8277-01A
0 years, male, white, stage:Stage IIIA, dead, 307 days
225.9
TCGA-XC-AA0X-01A
0 years, female, black or african american, stage:Stage IA, dead, 6 days
225.0
TCGA-18-3410-01A
0 years, male, stage:Stage IIB, dead, 146 days
224.5
TCGA-77-A5GH-01A
0 years, male, stage:Stage IB, alive, 1182 days
223.9
TCGA-77-7141-01A
0 years, male, white, stage:Stage IB, alive, 15 days
223.6
TCGA-58-8386-01A
0 years, male, stage:Stage IV, dead, 1 days
223.3
TCGA-66-2737-01A
0 years, male, stage:Stage IIB, alive, 61 days
223.1
TCGA-66-2758-01A
0 years, male, stage:Stage IB, alive, 639 days
222.4
TCGA-22-5491-01A
0 years, male, white, stage:Stage IA, dead, 1713 days
221.6
TCGA-33-4538-01A
0 years, male, white, stage:Stage IIIA, dead, 2979 days
221.6
TCGA-56-7579-01A
0 years, male, white, stage:Stage IIIA, dead, 951 days
221.4
TCGA-66-2744-01A
0 years, male, stage:Stage IIB, alive, 30 days
220.6
TCGA-66-2777-01A
0 years, male, stage:Stage IB, alive, 61 days
220.2
TCGA-77-A5G1-01A
0 years, male, stage:Stage IIIA, alive, 4026 days
220.1
TCGA-NC-A5HJ-01A
0 years, male, white, stage:Stage IIB, dead, 418 days
219.9
TCGA-18-4083-01A
0 years, male, white, stage:Stage IIB, dead, 188 days
219.9
TCGA-39-5034-01A
0 years, female, white, stage:Stage IIB, dead, 1107 days
218.9
TCGA-NC-A5HM-01A
0 years, male, white, stage:Stage IB, alive, 1212 days
217.8
TCGA-85-8666-01A
0 years, male, white, stage:Stage IB, dead, 687 days
217.8
TCGA-56-7731-01A
0 years, female, white, stage:Stage IB, dead, 3 days
217.3
TCGA-66-2755-01A
0 years, male, stage:Stage IB, alive, 28 days
217.2
TCGA-85-7699-01A
0 years, male, white, stage:Stage IIIA, dead, 1001 days
217.2
TCGA-43-A474-01A
0 years, male, white, stage:Stage IIA, alive, 353 days
215.2
TCGA-39-5011-01A
0 years, female, white, stage:Stage IA, alive, 4053 days
215.0
TCGA-66-2765-01A
0 years, male, stage:Stage IB, alive, 61 days
214.6
TCGA-22-5481-01A
0 years, female, white, stage:Stage IIB, dead, 2409 days
214.1
TCGA-56-A62T-01A
0 years, male, black or african american, stage:Stage IIA, alive, 440 days
213.1
TCGA-22-5479-01A
0 years, male, white, stage:Stage IB, dead, 2625 days
212.9
TCGA-18-4086-01A
0 years, male, stage:Stage IB, dead, 85 days
212.8
TCGA-34-7107-01A
0 years, male, white, stage:Stage II, dead, 34 days
212.8
TCGA-56-8503-01A
0 years, female, white, stage:Stage IIB, alive, 41 days
212.4
TCGA-56-A5DR-01A
0 years, male, white, stage:Stage IA, alive, 4 days
212.4
TCGA-68-A59J-01A
0 years, female, white, stage:Stage IB, alive, 448 days
212.0
TCGA-85-A53L-01A
0 years, male, asian, stage:Stage IIA, alive, 377 days
211.9
TCGA-34-5236-01A
0 years, male, white, stage:Stage IIB, dead, 276 days
211.6
TCGA-58-8387-01A
0 years, male, white, stage:Stage IIA, dead, 403 days
211.5
TCGA-85-8481-01A
0 years, male, white, stage:Stage IIB, dead, 236 days
211.2
TCGA-96-7545-01A
0 years, male, white, stage:Stage IA, dead, 1736 days
211.2
TCGA-58-A46L-01A
0 years, male, white, stage:Stage IIIA, alive, 1723 days
211.0
TCGA-46-3769-01A
0 years, male, white, stage:'--, alive, 135 days
210.9
TCGA-60-2720-01A
0 years, female, white, stage:Stage IB, alive, 97 days
210.3
TCGA-O2-A52N-01A
0 years, male, white, stage:Stage I, dead, 1006 days
210.0
TCGA-94-7557-01A
0 years, male, black or african american, stage:Stage IB, dead, 5 days
209.3
TCGA-85-8353-01A
0 years, male, white, stage:Stage IIIA, dead, 94 days
209.2
TCGA-22-4607-01A
0 years, male, white, stage:Stage IB, dead, 587 days
208.8
TCGA-66-2769-01A
0 years, male, stage:Stage IIIB, dead, 215 days
208.8
TCGA-34-5929-01A
0 years, female, white, stage:Stage IB, dead, 151 days
208.4
TCGA-56-7582-01A
0 years, male, white, stage:Stage IB, alive, 601 days
208.4
TCGA-92-7340-01A
0 years, female, white, stage:Stage IIA, alive, 82 days
207.9
TCGA-43-5670-01A
0 years, male, white, stage:Stage IIA, alive, 849 days
206.7
TCGA-92-7341-01A
0 years, male, white, stage:Stage IB, alive, 106 days
206.3
TCGA-43-7657-01A
0 years, female, white, stage:Stage IA, alive, 236 days
206.0
TCGA-58-8388-01A
0 years, male, white, stage:Stage IB, dead, 412 days
205.9
TCGA-34-8456-01A
0 years, female, white, stage:Stage IIA, alive, 804 days
205.4
TCGA-60-2711-01A
0 years, female, white, stage:Stage IB, alive, 1260 days
205.2
TCGA-60-2726-01A
0 years, male, white, stage:Stage IIA, dead, 358 days
205.2
TCGA-66-2786-01A
0 years, female, stage:Stage IA, alive, 790 days
205.0
TCGA-56-A4BX-01A
0 years, male, white, stage:Stage IIA, alive, 405 days
204.5
TCGA-56-8504-01A
0 years, male, white, stage:Stage IB, alive, 510 days
204.1
TCGA-56-A4ZK-01A
0 years, female, white, stage:Stage IB, alive, 570 days
203.6
TCGA-33-4582-01A
0 years, male, white, stage:Stage IA, dead, 3149 days
203.5
TCGA-85-A510-01A
0 years, female, white, stage:Stage IIB, alive, 482 days
203.5
TCGA-43-5668-01A
0 years, male, white, stage:Stage IIA, dead, 559 days
203.4
TCGA-85-8664-01A
0 years, male, white, stage:Stage IIB, dead, 550 days
202.5
TCGA-60-2725-01A
0 years, male, white, stage:Stage IB, alive, 816 days
202.2
TCGA-18-3412-01A
0 years, male, white, stage:Stage IB, dead, 345 days
201.8
TCGA-77-7138-01A
0 years, male, stage:Stage IB, dead, 340 days
201.1
TCGA-77-7463-01A
0 years, male, white, stage:Stage IB, dead, 1423 days
200.9
TCGA-22-4594-01A
0 years, female, stage:Stage IIIA, dead, 1470 days
200.4
TCGA-NC-A5HI-01A
0 years, female, white, stage:Stage IB, alive, 1743 days
200.1
TCGA-43-2581-01A
0 years, female, white, stage:Stage IIIA, alive, 1176 days
198.9
TCGA-33-6738-01A
0 years, male, white, stage:Stage IIIA, alive, 1927 days
198.8
TCGA-21-1079-01A
0 years, male, white, stage:Stage IIIA, dead, 965 days
198.7
TCGA-60-2697-01A
0 years, male, white, stage:Stage IIA, dead, 372 days
198.7
TCGA-33-4587-01A
0 years, female, white, stage:Stage IB, dead, 1656 days
198.3
TCGA-77-A5GA-01A
0 years, male, stage:Stage IB, alive, 1280 days
198.0
TCGA-63-7023-01A
male, stage:Stage IIA, alive, 1682 days
197.9
TCGA-39-5031-01A
0 years, female, stage:Stage IA, dead, 1841 days
197.7
TCGA-34-5241-01A
0 years, male, white, stage:Stage IB, dead, 515 days
197.5
TCGA-94-7033-01A
0 years, male, white, stage:Stage IB, alive, 640 days
197.5
TCGA-66-2785-01A
0 years, male, stage:Stage IB, alive, 60 days
197.3
TCGA-21-1080-01A
0 years, male, white, stage:Stage IB, alive, 3724 days
197.0
TCGA-60-2708-01A
0 years, female, white, stage:Stage IIB, alive, 2447 days
196.7
TCGA-77-8136-01A
0 years, female, stage:Stage IIB, dead, 1189 days
196.5
TCGA-60-2698-01A
0 years, male, white, stage:Stage IIB, dead, 311 days
196.5
TCGA-34-5232-01A
0 years, female, black or african american, stage:Stage IIA, alive, 2471 days
195.3
TCGA-98-A539-01A
0 years, male, white, stage:Stage IIB, alive, 173 days
195.2
TCGA-60-2707-01A
0 years, male, stage:Stage IB, dead, 667 days
194.1
TCGA-85-A4QQ-01A
0 years, male, white, stage:Stage IB, dead, 927 days
194.0
TCGA-51-4080-01A
0 years, male, black or african american, stage:Stage IIIB, dead, 12 days
193.8
TCGA-34-8454-01A
0 years, female, white, stage:Stage IIIA, alive, 1180 days
193.7
TCGA-58-A46J-01A
0 years, male, white, stage:Stage IIB, alive, 2589 days
192.7
TCGA-77-6843-01A
0 years, male, white, stage:Stage IIA, dead, 2224 days
192.7
TCGA-77-8130-01A
0 years, male, stage:Stage IIB, alive, 4765 days
192.7
TCGA-85-A4PA-01A
0 years, male, white, stage:Stage IB, alive, 741 days
192.5
TCGA-90-A4EE-01A
0 years, male, white, stage:Stage IIA, alive, 688 days
192.1
TCGA-63-A5MH-01A
0 years, male, stage:Stage IA, alive, 2026 days
192.0
TCGA-56-7221-01A
0 years, male, white, stage:Stage IB, alive, 608 days
191.9
TCGA-37-4130-01A
0 years, male, white, stage:Stage IA, alive, 247 days
191.0
TCGA-22-5477-01A
0 years, male, white, stage:Stage IA, dead, 1346 days
190.7
TCGA-22-1016-01A
0 years, male, white, stage:Stage IB, dead, 822 days
190.7
TCGA-56-7822-01A
0 years, male, black or african american, stage:Stage IIB, dead, 532 days
190.6
TCGA-37-4141-01A
0 years, female, white, stage:Stage IA, alive, 12 days
190.5
TCGA-34-5927-01A
0 years, female, white, stage:Stage IA, alive, 1361 days
190.5
TCGA-46-6025-01A
0 years, male, white, stage:Stage IIB, alive, 324 days
190.0
TCGA-77-6842-01A
0 years, male, white, stage:Stage IIB, dead, 899 days
190.0
TCGA-46-3767-01A
0 years, male, white, stage:Stage IA, alive, 396 days
189.4
TCGA-22-1000-01A
0 years, male, white, stage:Stage IB, dead, 454 days
188.9
TCGA-56-7580-01A
0 years, male, white, stage:Stage IB, alive, 925 days
188.4
TCGA-77-7142-01A
0 years, female, white, stage:Stage IB, alive, 2227 days
187.9
TCGA-68-8251-01A
0 years, male, white, stage:Stage IB, alive, 406 days
187.8
TCGA-77-8140-01A
0 years, female, stage:Stage IIB, dead, 351 days
187.5
TCGA-66-2773-01A
0 years, male, stage:Stage IB, dead, 92 days
187.3
TCGA-18-3407-01A
0 years, male, asian, stage:Stage IB, dead, 136 days
187.3
TCGA-77-A5FZ-01A
0 years, male, stage:Stage IIIB, dead, 3838 days
187.3
TCGA-O2-A52S-01A
0 years, female, white, stage:Stage III, dead, 387 days
186.7
TCGA-85-7843-01A
0 years, male, white, stage:Stage IIA, alive, 35 days
186.6
TCGA-18-3411-01A
0 years, female, stage:Stage IIIA, alive, 3576 days
185.9
TCGA-98-8022-01A
0 years, male, white, stage:Stage IA, dead, 933 days
185.2
TCGA-66-2795-01A
0 years, male, stage:Stage IIIB, alive, 122 days
185.0
TCGA-22-4596-01A
0 years, female, white, stage:Stage IB, dead, 17 days
184.6
TCGA-22-5480-01A
0 years, female, white, stage:Stage IA, dead, 2170 days
184.6
TCGA-39-5040-01A
0 years, male, white, stage:Stage IIIA, dead, 519 days
183.8
TCGA-56-8625-01A
0 years, female, white, stage:Stage IIIA, dead, 315 days
183.4
TCGA-22-5474-01A
0 years, male, white, stage:Stage IB, dead, 445 days
182.8
TCGA-85-8582-01A
0 years, male, white, stage:Stage IA, alive, 1160 days
182.6
TCGA-34-5239-01A
0 years, male, white, stage:Stage IIIA, alive, 1834 days
182.3
TCGA-60-2723-01A
0 years, female, white, stage:Stage IB, alive, 1092 days
181.5
TCGA-56-7223-01A
0 years, male, white, stage:Stage IIIA, dead, 442 days
181.5
TCGA-68-8250-01A
0 years, male, black or african american, stage:Stage IA, alive, 244 days
181.2
TCGA-56-8201-01A
0 years, male, white, stage:Stage IIB, dead, 397 days
181.0
TCGA-66-2780-01A
0 years, male, stage:Stage IB, dead, 366 days
180.0
TCGA-63-A5MB-01A
0 years, male, stage:Stage IB, alive, 3123 days
180.0
TCGA-21-1076-01A
0 years, female, white, stage:Stage IB, alive, 1852 days
179.7
TCGA-22-5492-01A
0 years, female, stage:Stage IIIA, dead, 506 days
179.6
TCGA-85-8355-01A
0 years, male, white, stage:Stage IA, alive, 61 days
179.2
TCGA-66-2771-01A
0 years, male, stage:Stage IIB, alive, 578 days
178.9
TCGA-66-2778-01A
0 years, female, stage:Stage IIIB, alive, 578 days
178.8
TCGA-39-5019-01A
0 years, male, white, stage:Stage IB, alive, 3387 days
178.6
TCGA-56-8626-01A
0 years, male, white, stage:Stage IA, dead, 302 days
178.4
TCGA-56-8305-01A
0 years, male, white, stage:Stage IB, alive, 105 days
178.4
TCGA-85-A4JB-01A
0 years, male, white, stage:Stage IIB, alive, 942 days
177.0
TCGA-66-2767-01A
0 years, male, stage:Stage IIIB, alive, 61 days
176.9
TCGA-NK-A5CT-01A
0 years, male, white, stage:Stage IA, alive, 1997 days
176.7
TCGA-21-1071-01A
0 years, male, white, stage:Stage IB, dead, 1426 days
176.2
TCGA-J1-A4AH-01A
0 years, male, white, stage:Stage IIA, alive, 581 days
176.1
TCGA-21-5783-01A
0 years, male, white, stage:Stage IB, dead, 2680 days
175.8
TCGA-85-A4QR-01A
0 years, male, white, stage:Stage IB, alive, 600 days
175.6
TCGA-39-5029-01A
0 years, male, white, stage:Stage IIIA, dead, 740 days
175.1
TCGA-60-2704-01A
0 years, male, white, stage:Stage IIB, dead, 1154 days
174.2
TCGA-85-A50M-01A
0 years, male, asian, stage:Stage IIA, dead, 826 days
173.9
TCGA-98-A53C-01A
0 years, female, white, stage:Stage IA, alive, 822 days
173.9
TCGA-34-A5IX-01A
0 years, male, white, stage:Stage IIB, alive, 1031 days
172.8
TCGA-66-2789-01A
0 years, male, stage:Stage IIIB, dead, 123 days
172.5
TCGA-56-8628-01A
0 years, male, white, stage:Stage IA, alive, 616 days
172.4
TCGA-NC-A5HG-01A
0 years, male, white, stage:Stage IIIA, alive, 1963 days
171.6
TCGA-18-4721-01A
0 years, male, white, stage:Stage IA, alive, 4694 days
171.6
TCGA-NC-A5HF-01A
0 years, male, white, stage:Stage IIIB, dead, 138 days
171.5
TCGA-94-A5I6-01A
0 years, male, white, stage:Stage IIB, alive, 538 days
171.4
TCGA-98-7454-01A
0 years, male, white, stage:Stage IB, alive, 652 days
171.3
TCGA-66-2734-01A
0 years, female, stage:Stage IB, alive, 1311 days
170.8
TCGA-NC-A5HN-01A
0 years, male, white, stage:Stage IIA, alive, 1499 days
170.6
TCGA-56-8623-01A
0 years, male, white, stage:Stage IB, dead, 692 days
170.2
TCGA-NK-A7XE-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 13 days
170.1
TCGA-L3-A4E7-01A
0 years, male, white, stage:Stage IB, alive, 392 days
170.0
TCGA-56-8622-01A
0 years, male, white, stage:Stage IB, alive, 55 days
169.7
TCGA-NK-A5CX-01A
0 years, male, white, stage:Stage IIA, alive, 111 days
169.1
TCGA-39-5030-01A
0 years, female, asian, stage:Stage IIIA, dead, 59 days
168.7
TCGA-98-8023-01A
0 years, male, white, stage:Stage IIIA, alive, 649 days
168.6
TCGA-43-A56V-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 366 days
167.8
TCGA-60-2715-01A
0 years, male, white, stage:Stage IA, dead, 1075 days
167.1
TCGA-34-2600-01A
0 years, female, white, stage:Stage IA, dead, 1874 days
166.7
TCGA-22-4591-01A
0 years, male, white, stage:Stage IIIA, dead, 623 days
166.6
TCGA-21-A5DI-01A
0 years, male, white, stage:Stage IA, alive, 979 days
166.5
TCGA-63-7021-01A
male, stage:Stage IA, alive, 2142 days
165.4
TCGA-90-A59Q-01A
0 years, female, white, stage:Stage IIA, dead, 322 days
165.2
TCGA-56-A49D-01A
0 years, male, white, stage:Stage IIIA, alive, 637 days
164.4
TCGA-O2-A5IB-01A
0 years, female, white, stage:Stage III, dead, 340 days
164.0
TCGA-63-A5MR-01A
0 years, female, stage:Stage IB, alive, 2716 days
164.0
TCGA-56-8308-01A
0 years, male, white, stage:Stage IIB, alive, 517 days
163.8
TCGA-77-8008-01A
0 years, male, stage:Stage IB, dead, 2639 days
163.7
TCGA-85-6175-01A
0 years, female, white, stage:Stage IIB, dead, 294 days
163.7
TCGA-98-A538-01A
0 years, male, white, stage:Stage IIB, alive, 826 days
163.4
TCGA-22-1012-01A
0 years, female, white, stage:Stage IB, dead, 429 days
163.2
TCGA-MF-A522-01A
0 years, male, white, stage:Stage IB, dead, 360 days
163.1
TCGA-18-3409-01A
0 years, male, white, stage:Stage IA, alive, 3747 days
162.9
TCGA-85-7710-01A
0 years, female, white, stage:Stage IA, alive, 42 days
161.4
TCGA-85-8048-01A
0 years, male, white, stage:Stage IA, alive, 765 days
161.2
TCGA-18-3406-01A
0 years, male, white, stage:Stage IA, dead, 371 days
161.2
TCGA-56-5897-01A
0 years, male, white, stage:Stage IA, alive, 378 days
160.8
TCGA-56-5898-01A
0 years, male, white, stage:Stage IA, alive, 555 days
160.4
TCGA-68-A59I-01A
0 years, female, black or african american, stage:Stage IIIA, alive, 492 days
160.1
TCGA-77-8138-01A
0 years, male, stage:Stage IB, dead, 539 days
159.2
TCGA-34-2608-01A
0 years, male, white, stage:Stage IB, dead, 1000 days
159.1
TCGA-85-8354-01A
0 years, male, white, stage:Stage IB, alive, 995 days
158.9
TCGA-60-2706-01A
0 years, male, white, stage:Stage IA, alive, 2820 days
158.8
TCGA-90-6837-01A
0 years, male, white, stage:Stage IIB, alive, 758 days
158.7
TCGA-43-8115-01A
0 years, female, white, stage:Stage IIA, alive, 407 days
158.7
TCGA-34-8455-01A
0 years, male, white, stage:Stage IV, dead, 123 days
158.6
TCGA-18-5592-01A
0 years, male, stage:Stage IIB, alive, 1519 days
158.0
TCGA-77-8154-01A
0 years, male, stage:Stage IA, alive, 1841 days
158.0
TCGA-56-6545-01A
0 years, female, white, stage:Stage IB, alive, 666 days
157.8
TCGA-O2-A52V-01A
0 years, female, black or african american, stage:Stage II, dead, 1335 days
157.7
TCGA-56-7222-01A
0 years, male, white, stage:Stage IB, dead, 562 days
157.6
TCGA-66-2781-01A
0 years, male, stage:Stage IB, alive, 121 days
157.5
TCGA-22-A5C4-01A
0 years, male, white, stage:Stage IIA, alive, 671 days
157.3
TCGA-63-A5MV-01A
0 years, male, stage:Stage IIA, alive, 1100 days
156.8
TCGA-22-4604-01A
0 years, male, white, stage:Stage IIA, dead, 399 days
156.5
TCGA-33-4566-01A
0 years, male, white, stage:Stage IB, dead, 5287 days
156.3
TCGA-34-5928-01A
0 years, female, white, stage:Stage IIB, alive, 1196 days
156.0
TCGA-77-8143-01A
0 years, male, stage:Stage IIIA, dead, 803 days
155.9
TCGA-85-8276-01A
0 years, male, white, stage:Stage IIA, alive, 1050 days
155.4
TCGA-58-A46K-01A
0 years, male, white, stage:Stage IIIA, dead, 1045 days
155.3
TCGA-52-7809-01A
0 years, male, white, stage:Stage IB, dead, 166 days
154.7
TCGA-85-8350-01A
0 years, male, white, stage:Stage IA, alive, 683 days
153.8
TCGA-60-2724-01A
0 years, male, white, stage:Stage IIIA, alive, 717 days
153.7
TCGA-85-7697-01A
0 years, male, white, stage:Stage IIB, alive, 1063 days
152.9
TCGA-85-8351-01A
0 years, male, white, stage:Stage IIA, alive, 510 days
152.7
TCGA-21-5786-01A
0 years, male, white, stage:Stage IB, alive, 1032 days
152.5
TCGA-60-2719-01A
0 years, female, white, stage:Stage IB, alive, 1297 days
151.8
TCGA-22-5489-01A
0 years, male, white, stage:Stage IA, dead, 1912 days
151.6
TCGA-39-5016-01A
0 years, male, white, stage:Stage IIA, alive, 3850 days
151.4
TCGA-21-1077-01A
0 years, male, white, stage:Stage IIB, dead, 1058 days
150.3
TCGA-85-6560-01A
0 years, male, white, stage:Stage IIA, alive, 1259 days
150.2
TCGA-22-5478-01A
0 years, male, stage:Stage IB, dead, 24 days
148.9
TCGA-NC-A5HQ-01A
0 years, male, white, stage:Stage IIIA, dead, 448 days
148.4
TCGA-60-2714-01A
0 years, female, white, stage:Stage IIB, alive, 1531 days
148.1
TCGA-39-5028-01A
0 years, male, white, stage:Stage IIIA, dead, 52 days
147.9
TCGA-66-2763-01A
0 years, female, stage:Stage IB, alive, 30 days
147.9
TCGA-39-5035-01A
0 years, female, white, stage:Stage IA, alive, 2080 days
147.9
TCGA-85-A513-01A
0 years, female, asian, stage:Stage IA, alive, 910 days
147.6
TCGA-66-2742-01A
0 years, male, stage:Stage IV, alive, 641 days
147.5
TCGA-58-8392-01A
0 years, male, white, stage:Stage IB, dead, 501 days
147.5
TCGA-18-5595-01A
0 years, male, stage:Stage IB, dead, 827 days
146.8
TCGA-22-4595-01A
0 years, male, white, stage:Stage IIIA, dead, 734 days
146.8
TCGA-22-4601-01A
0 years, female, white, stage:Stage IIIA, dead, 1057 days
146.5
TCGA-46-3766-01A
0 years, female, white, stage:Stage IA, alive, 370 days
146.5
TCGA-33-AASD-01A
0 years, male, black or african american, stage:Stage IA, dead, 2249 days
145.5
TCGA-60-2709-01A
0 years, male, black or african american, stage:Stage IB, alive, 1505 days
145.5
TCGA-18-3421-01A
0 years, male, white, stage:Stage IB, alive, 2645 days
145.4
TCGA-63-A5MW-01A
0 years, male, stage:Stage IB, alive, 1639 days
144.9
TCGA-94-8491-01A
0 years, male, white, stage:Stage IIA, alive, 810 days
144.9
TCGA-21-1078-01A
0 years, male, white, stage:Stage IB, dead, 474 days
144.6
TCGA-70-6723-01A
0 years, male, asian, stage:Stage IIA, alive, 375 days
144.4
TCGA-43-6647-01A
0 years, female, white, stage:Stage IIB, alive, 757 days
142.9
TCGA-60-2703-01A
0 years, male, white, stage:Stage IIB, dead, 2945 days
142.7
TCGA-58-8393-01A
0 years, female, white, stage:Stage IB, alive, 1058 days
142.2
TCGA-21-1075-01A
0 years, male, white, stage:Stage IIB, alive, 2134 days
142.1
TCGA-43-7656-01A
0 years, male, white, stage:Stage IA, alive, 596 days
141.8
TCGA-63-A5MY-01A
0 years, male, stage:Stage IA, alive, 1052 days
141.7
TCGA-22-1002-01A
0 years, male, white, stage:Stage IA, dead, 131 days
141.6
TCGA-56-8304-01A
0 years, female, white, stage:Stage IA, alive, 106 days
140.9
TCGA-43-8116-01A
0 years, male, white, stage:Stage IA, alive, 358 days
139.7
TCGA-70-6722-01A
0 years, male, asian, stage:Stage IIIA, alive, 367 days
139.5
TCGA-33-4547-01A
0 years, male, white, stage:Stage IB, alive, 2419 days
139.5
TCGA-92-8064-01A
0 years, male, white, stage:'--, alive, 160 days
139.3
TCGA-85-A50Z-01A
0 years, male, white, stage:Stage IIA, alive, 493 days
138.5
TCGA-NC-A5HT-01A
0 years, male, white, stage:Stage IIIA, alive, 804 days
138.5
TCGA-46-6026-01A
0 years, male, white, stage:Stage IIB, alive, 423 days
138.5
TCGA-39-5022-01A
0 years, male, white, stage:Stage IB, dead, 1679 days
138.2
TCGA-77-A5G6-01A
0 years, male, stage:Stage IIIA, dead, 678 days
138.2
TCGA-22-4593-01A
0 years, male, white, stage:Stage IIA, dead, 1067 days
138.0
TCGA-94-7943-01A
0 years, male, white, stage:Stage IA, alive, 559 days
137.8
TCGA-22-1005-01A
0 years, male, white, stage:Stage IA, dead, 1953 days
137.2
TCGA-90-A4ED-01A
0 years, male, white, stage:Stage IB, alive, 615 days
136.7
TCGA-43-A56U-01A
0 years, female, white, stage:Stage IA, alive, 432 days
136.4
TCGA-51-6867-01A
0 years, female, white, stage:Stage I, dead, 1856 days
136.0
TCGA-98-A53B-01A
0 years, male, white, stage:Stage IB, dead, 61 days
135.6
TCGA-22-4599-01A
0 years, female, white, stage:Stage IB, dead, 1161 days
135.1
TCGA-85-8288-01A
0 years, male, white, stage:Stage IIA, dead, 402 days
134.5
TCGA-66-2788-01A
0 years, male, stage:Stage IB, alive, 699 days
134.2
TCGA-96-8170-01A
0 years, female, white, stage:Stage IIA, alive, 531 days
133.9
TCGA-63-A5MN-01A
0 years, female, stage:Stage IIB, dead, 345 days
133.1
TCGA-77-6845-01A
0 years, male, white, stage:Stage IIB, dead, 708 days
132.7
TCGA-77-8146-01A
0 years, male, stage:Stage IA, alive, 3189 days
132.6
TCGA-63-A5MS-01A
0 years, male, stage:Stage IB, alive, 2381 days
132.0
TCGA-22-4613-01A
0 years, female, white, stage:Stage IA, dead, 358 days
131.1
TCGA-21-1082-01A
0 years, male, white, stage:Stage IB, alive, 3644 days
130.6
TCGA-56-8624-01A
0 years, male, white, stage:Stage IIB, alive, 420 days
130.1
TCGA-85-8049-01A
0 years, male, white, stage:Stage IB, alive, 579 days
129.2
TCGA-94-A4VJ-01A
0 years, female, white, stage:Stage IA, alive, 430 days
128.8
TCGA-60-2696-01A
0 years, female, black or african american, stage:Stage IIA, dead, 109 days
128.4
TCGA-43-6773-01A
0 years, male, white, stage:Stage IIB, dead, 116 days
128.2
TCGA-90-7766-01A
0 years, female, white, stage:Stage IA, alive, 289 days
128.0
TCGA-56-8629-01A
0 years, male, white, stage:Stage IIA, alive, 481 days
127.1
TCGA-66-2753-01A
0 years, male, stage:Stage IB, alive, 31 days
126.9
TCGA-96-8169-01A
0 years, female, white, stage:Stage IA, alive, 557 days
126.8
TCGA-63-A5MG-01A
0 years, male, stage:Stage IB, alive, 2148 days
126.0
TCGA-56-A5DS-01A
0 years, female, white, stage:Stage IB, alive, 8 days
125.8
TCGA-33-4532-01A
0 years, male, white, stage:Stage IB, dead, 3924 days
125.6
TCGA-33-AASI-01A
0 years, female, black or african american, stage:Stage IIB, dead, 1344 days
124.8
TCGA-77-8007-01A
0 years, male, stage:Stage IIB, dead, 198 days
124.5
TCGA-66-2793-01A
0 years, male, stage:Stage IIIB, dead, 306 days
123.1
TCGA-43-6771-01A
0 years, male, white, stage:Stage IB, dead, 166 days
122.8
TCGA-66-2782-01A
0 years, male, stage:Stage IIB, dead, 365 days
122.7
TCGA-63-A5MI-01A
0 years, male, stage:Stage IIIA, alive, 1784 days
122.4
TCGA-34-5231-01A
0 years, male, white, stage:Stage IA, dead, 1984 days
122.1
TCGA-63-7022-01A
female, stage:Stage IA, alive, 2073 days
119.8
TCGA-66-2790-01A
0 years, male, stage:Stage IIB, alive, 699 days
119.3
TCGA-21-1070-01A
0 years, female, black or african american, stage:Stage IIIA, alive, 3636 days
119.3
TCGA-18-3417-01A
0 years, male, stage:Stage IV, dead, 1097 days
119.1
TCGA-96-7544-01A
0 years, male, white, stage:Stage IIB, dead, 2160 days
118.3
TCGA-85-8287-01A
0 years, male, white, stage:Stage IA, dead, 23 days
117.9
TCGA-85-6561-01A
0 years, male, white, stage:Stage IB, alive, 1224 days
117.9
TCGA-77-6844-01A
0 years, male, white, stage:Stage IIIA, dead, 2284 days
116.1
TCGA-63-7020-01A
male, stage:Stage IA, alive, 2133 days
116.0
TCGA-21-1083-01A
0 years, male, white, stage:Stage IA, dead, 1315 days
115.9
TCGA-77-8139-01A
0 years, male, stage:Stage IIB, alive, 3166 days
114.2
TCGA-18-3408-01A
0 years, female, white, stage:Stage IB, dead, 2304 days
114.1
TCGA-90-7964-01A
0 years, male, white, stage:Stage IB, alive, 428 days
113.7
TCGA-22-1011-01A
0 years, male, white, stage:Stage IB, dead, 53 days
112.3
TCGA-56-8307-01A
0 years, female, white, stage:Stage IIB, alive, 818 days
110.5
TCGA-60-2721-01A
0 years, male, white, stage:Stage IB, alive, 983 days
110.5
TCGA-21-1081-01A
0 years, male, white, stage:Stage IIB, dead, 284 days
110.5
TCGA-O2-A52W-01A
0 years, male, black or african american, stage:Stage I, dead, 261 days
110.2
TCGA-77-8145-01A
0 years, male, stage:Stage IIIB, dead, 212 days
109.8
TCGA-92-8065-01A
0 years, female, white, stage:Stage IIB, alive, 70 days
109.0
TCGA-60-2716-01A
0 years, male, stage:Stage IIB, alive, 1475 days
105.5
TCGA-21-5782-01A
0 years, female, white, stage:Stage IB, dead, 962 days
104.5
TCGA-43-6143-01A
0 years, male, white, stage:Stage IB, alive, 699 days
99.5
TCGA-60-2712-01A
0 years, female, white, stage:Stage IIB, dead, 274 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC61B is not prognostic in Lung Squamous Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
132.6
Number of samples
68
Samples
Sample
Description
TPM
L857
0 years, male, stage:Stage IB, dead, 226 days
248.9
L559
0 years, male, stage:Stage IIB, alive, 2615 days
247.1
L633
0 years, female, stage:Stage IA, alive, 2102 days
224.3
L852
0 years, male, stage:Stage IB, dead, 700 days
213.1
L534
0 years, male, stage:Stage IIA, alive, 2693 days
193.8
L483
0 years, male, stage:Stage IB, dead, 77 days
178.6
L650
0 years, female, stage:Stage IB, dead, 986 days
177.6
L723
0 years, male, stage:Stage IIA, dead, 433 days
177.4
L496
0 years, male, stage:Stage IB, alive, 2761 days
175.2
L767
0 years, male, stage:Stage IA, alive, 1718 days
173.8
L658
0 years, female, stage:Stage IIB, alive, 2083 days
171.1
L881
0 years, male, stage:Stage IB, alive, 1752 days
171.1
L608
0 years, male, stage:Stage IA, alive, 2350 days
169.4
L712
0 years, male, stage:Stage IA, alive, 1698 days
167.8
L756
0 years, male, stage:Stage IB, alive, 1796 days
164.9
L563
0 years, female, stage:Stage IIB, dead, 1216 days
164.1
L464
0 years, male, stage:Stage IB, dead, 1935 days
162.6
L739
0 years, female, stage:Stage IIIA, dead, 352 days
162.2
L592
0 years, male, stage:Stage IB, alive, 2368 days
161.7
L488
0 years, female, stage:Stage IIA, alive, 2993 days
158.8
L539
0 years, male, stage:Stage IB, dead, 370 days
157.6
L788
0 years, female, stage:Stage IA, alive, 3385 days
152.7
L753
0 years, male, stage:Stage IIA, alive, 1705 days
149.8
L661
0 years, male, stage:Stage IA, dead, 1123 days
149.2
L818
0 years, male, stage:Stage IB, alive, 2480 days
146.7
L457
0 years, female, stage:Stage IIA, alive, 2901 days
138.7
L854
0 years, female, stage:Stage IB, alive, 2256 days
137.9
L858
0 years, female, stage:Stage IIB, dead, 558 days
137.0
L744
0 years, male, stage:Stage IA, alive, 1614 days
133.7
L856
0 years, male, stage:Stage IA, dead, 1465 days
133.4
L568
0 years, female, stage:Stage IIB, dead, 71 days
130.7
L466
0 years, female, stage:Stage IIIA, dead, 412 days
127.2
L824
0 years, male, stage:Stage IA, dead, 665 days
122.8
L747
0 years, female, stage:Stage IA, dead, 1112 days
122.3
L529
0 years, female, stage:Stage IA, alive, 2775 days
122.0
L719
0 years, male, stage:Stage IB, alive, 1615 days
119.9
L456
0 years, male, stage:Stage IIA, dead, 1660 days
119.7
L751
0 years, female, stage:Stage IIIA, alive, 1600 days
117.2
L642
0 years, male, stage:Stage IB, dead, 1167 days
116.8
L736
0 years, male, stage:Stage IA, dead, 1195 days
116.0
L886
0 years, male, stage:Stage IB, dead, 1932 days
114.8
L685
0 years, female, stage:Stage IIB, alive, 1944 days
114.7
L459
0 years, male, stage:Stage IIA, alive, 3181 days
111.4
L472
0 years, male, stage:Stage IB, dead, 423 days
111.1
L470
0 years, female, stage:Stage IB, dead, 1774 days
110.8
L447
0 years, male, stage:Stage IIB, alive, 3203 days
109.9
L604
0 years, male, stage:Stage IIA, dead, 286 days
108.8
L444
0 years, female, stage:Stage IIB, alive, 3337 days
108.3
L452
0 years, male, stage:Stage IIIA, dead, 3115 days
107.0
L655
0 years, male, stage:Stage IIA, dead, 1603 days
106.1
L644
0 years, male, stage:Stage IA, dead, 282 days
103.4
L586
0 years, male, stage:Stage IIA, dead, 784 days
103.4
L442
0 years, female, stage:Stage IB, dead, 2433 days
101.7
L420
0 years, female, stage:Stage IIB, dead, 295 days
100.0
L572
0 years, male, stage:Stage IA, alive, 2532 days
98.5
L864
0 years, female, stage:Stage IA, alive, 2192 days
93.4
L817
0 years, female, stage:Stage IIIA, dead, 1279 days
93.1
L715
0 years, female, stage:Stage IIIA, dead, 150 days
93.0
L490
0 years, male, stage:Stage IA, dead, 716 days
92.8
L820
0 years, female, stage:Stage IA, alive, 2405 days
92.3
L652
0 years, male, stage:Stage IA, dead, 5 days
87.9
L468
0 years, male, stage:Stage IB, alive, 3004 days
87.3
L755
0 years, male, stage:Stage IIA, dead, 227 days
85.1
L406
0 years, male, stage:Stage IA, alive, 3057 days
77.9
L758
0 years, male, stage:Stage IA, dead, 1562 days
74.8
L860
0 years, male, stage:Stage IA, alive, 2056 days
73.8
L884
0 years, male, stage:Stage IIA, alive, 1627 days
70.5
L760
0 years, male, stage:Stage IIA, alive, 1895 days
70.3
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LUNG ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
213
Samples
Sample ID
Sample type
nRPX
CPT0084140003
Tumor
1.4
CPT0090340003
Tumor
1.1
CPT0068610003
Tumor
1.0
CPT0063810003
Tumor
0.9
CPT0066780003
Tumor
0.9
CPT0109740004
Tumor
0.8
CPT0001580009
Tumor
0.8
CPT0147080004
Tumor
0.8
CPT0090700003
Tumor
0.8
CPT0067450003
Tumor
0.7
CPT0113210003
Tumor
0.7
CPT0117970003
Tumor
0.7
CPT0069360003
Tumor
0.6
CPT0055100004
Tumor
0.6
CPT0021450003
Tumor
0.6
CPT0147380004
Tumor
0.6
CPT0069700003
Tumor
0.6
CPT0001960003
Tumor
0.6
CPT0070060003
Tumor
0.6
CPT0112060003
Tumor
0.5
CPT0001060010
Tumor
0.5
CPT0067940003
Tumor
0.5
CPT0069520003
Tumor
0.5
CPT0086310003
Tumor
0.5
CPT0068100003
Tumor
0.5
CPT0053040004
Tumor
0.5
CPT0115070003
Tumor
0.5
CPT0000920017
Tumor
0.5
CPT0105230003
Tumor
0.5
CPT0118200003
Tumor
0.5
CPT0105710003
Tumor
0.4
CPT0118620003
Tumor
0.4
CPT0118160003
Tumor
0.4
CPT0082740004
Tumor
0.4
CPT0068800003
Tumor
0.4
CPT0092240003
Tumor
0.4
CPT0067070003
Tumor
0.4
CPT0083780003
Tumor
0.4
CPT0113990003
Tumor
0.3
CPT0147480004
Tumor
0.3
CPT0090570004
Tumor
0.3
CPT0052170004
Tumor
0.3
CPT0109830004
Tumor
0.3
CPT0106110003
Tumor
0.3
CPT0090170004
Tumor
0.3
CPT0052940004
Tumor
0.3
CPT0146980004
Tumor
0.3
CPT0014860003
Tumor
0.3
CPT0067250003
Tumor
0.3
CPT0008450003
Tumor
0.3
CPT0105600003
Tumor
0.3
CPT0091240003
Tumor
0.2
CPT0001660013
Tumor
0.2
CPT0105940003
Tumor
0.2
CPT0014260003
Tumor
0.2
CPT0089340003
Tumor
0.2
CPT0147980004
Tumor
0.2
CPT0118880003
Tumor
0.2
CPT0063730003
Tumor
0.2
CPT0105330003
Tumor
0.2
CPT0097580003
Tumor
0.2
CPT0001970003
Normal
0.2
CPT0105630003
Tumor
0.2
CPT0013880003
Tumor
0.2
CPT0147880004
Tumor
0.2
CPT0083390004
Tumor
0.2
CPT0086750003
Tumor
0.2
CPT0110980004
Tumor
0.2
CPT0092530003
Tumor
0.1
CPT0114660004
Tumor
0.1
CPT0146780004
Tumor
0.1
CPT0091860003
Tumor
0.1
CPT0104630003
Tumor
0.1
CPT0125810003
Tumor
0.1
CPT0105060003
Tumor
0.1
CPT0148180004
Tumor
0.1
CPT0015410003
Tumor
0.1
CPT0105510003
Tumor
0.1
CPT0110860004
Tumor
0.0
CPT0066890003
Tumor
0.0
CPT0001380003
Tumor
0.0
CPT0001390003
Normal
0.0
CPT0104750003
Tumor
0.0
CPT0090860003
Tumor
0.0
CPT0109680004
Tumor
0.0
CPT0146880004
Tumor
0.0
CPT0102450003
Tumor
0.0
CPT0013600003
Tumor
0.0
CPT0062810003
Normal
0.0
CPT0104970003
Tumor
0.0
CPT0105270003
Tumor
-0.1
CPT0114840003
Tumor
-0.1
CPT0146680004
Tumor
-0.1
CPT0148280004
Tumor
-0.1
CPT0067620003
Tumor
-0.1
CPT0111300003
Tumor
-0.1
CPT0118340003
Tumor
-0.1
CPT0118240003
Normal
-0.1
CPT0001800013
Tumor
-0.1
CPT0114690003
Normal
-0.1
CPT0118570003
Tumor
-0.1
CPT0001070003
Normal
-0.2
CPT0011710004
Tumor
-0.2
CPT0118810003
Tumor
-0.2
CPT0109760003
Normal
-0.2
CPT0000930003
Normal
-0.2
CPT0008410003
Tumor
-0.2
CPT0083810003
Normal
-0.2
CPT0111480003
Normal
-0.2
CPT0092930003
Tumor
-0.2
CPT0098130003
Tumor
-0.2
CPT0114010003
Normal
-0.2
CPT0086320003
Normal
-0.2
CPT0079830003
Tumor
-0.3
CPT0083100003
Tumor
-0.3
CPT0111590003
Normal
-0.3
CPT0112080003
Normal
-0.3
CPT0067110003
Normal
-0.3
CPT0104650003
Normal
-0.3
CPT0014930003
Normal
-0.3
CPT0114880003
Normal
-0.3
CPT0021490003
Normal
-0.3
CPT0011930003
Normal
-0.3
CPT0104760003
Normal
-0.3
CPT0090720003
Normal
-0.3
CPT0109710003
Normal
-0.3
CPT0067290003
Normal
-0.3
CPT0148000003
Normal
-0.3
CPT0146700003
Normal
-0.3
CPT0086770003
Normal
-0.3
CPT0023310003
Tumor
-0.4
CPT0069720003
Normal
-0.4
CPT0097600003
Normal
-0.4
CPT0125830003
Normal
-0.4
CPT0023320003
Normal
-0.4
CPT0147900003
Normal
-0.4
CPT0067950003
Normal
-0.4
CPT0146800003
Normal
-0.4
CPT0105190003
Normal
-0.4
CPT0069550003
Normal
-0.4
CPT0147100003
Normal
-0.4
CPT0147580004
Tumor
-0.4
CPT0091260003
Normal
-0.4
CPT0110890003
Normal
-0.4
CPT0063840003
Normal
-0.4
CPT0084170003
Normal
-0.4
CPT0105250003
Normal
-0.4
CPT0051690004
Tumor
-0.4
CPT0066810003
Normal
-0.4
CPT0090600003
Normal
-0.4
CPT0001810003
Normal
-0.4
CPT0091870003
Normal
-0.4
CPT0063750003
Normal
-0.4
CPT0092250003
Normal
-0.5
CPT0001590003
Normal
-0.5
CPT0113220003
Normal
-0.5
CPT0082850004
Tumor
-0.5
CPT0118600003
Normal
-0.5
CPT0014290003
Normal
-0.5
CPT0013910003
Normal
-0.5
CPT0147500003
Normal
-0.5
CPT0115090003
Normal
-0.5
CPT0105550003
Normal
-0.5
CPT0105610003
Normal
-0.5
CPT0146600003
Normal
-0.6
CPT0148200003
Normal
-0.6
CPT0083140003
Normal
-0.6
CPT0068650003
Normal
-0.6
CPT0118010003
Normal
-0.6
CPT0118360003
Normal
-0.6
CPT0109720004
Tumor
-0.6
CPT0118650003
Normal
-0.6
CPT0015420003
Normal
-0.6
CPT0147400003
Normal
-0.7
CPT0105680003
Normal
-0.7
CPT0068130003
Normal
-0.7
CPT0118180003
Normal
-0.7
CPT0106100003
Normal
-0.7
CPT0102480003
Normal
-0.7
CPT0090200003
Normal
-0.7
CPT0105740003
Normal
-0.7
CPT0109850003
Normal
-0.7
CPT0083420003
Normal
-0.7
CPT0092940003
Normal
-0.7
CPT0118830003
Normal
-0.7
CPT0068830003
Normal
-0.7
CPT0109700003
Normal
-0.7
CPT0082890003
Normal
-0.8
CPT0118890003
Normal
-0.8
CPT0069370003
Normal
-0.8
CPT0090370003
Normal
-0.8
CPT0079850003
Normal
-0.8
CPT0148100003
Normal
-0.8
CPT0001690003
Normal
-0.8
CPT0090900004
Normal
-0.8
CPT0066930003
Normal
-0.8
CPT0013630003
Normal
-0.8
CPT0011750003
Normal
-0.9
CPT0089360003
Normal
-0.9
CPT0147600003
Normal
-0.9
CPT0105010004
Normal
-0.9
CPT0067470004
Normal
-0.9
CPT0105980003
Normal
-0.9
CPT0008420003
Normal
-0.9
CPT0147000003
Normal
-1.0
CPT0148300003
Normal
-1.0
CPT0105370004
Normal
-1.0
CPT0011910004
Tumor
-1.2
CPT0082770003
Normal
-1.2
CPT0067770003
Normal
-1.5
CPT0070080003
Normal
-3.9
CPT0146580004
Tumor
N/A
CPT0148080004
Tumor
N/A
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
212
Samples
Sample ID
Sample type
nRPX
CPT0112580003
Tumor
1.3
CPT0197090003
Tumor
1.1
CPT0202350004
Tumor
1.1
CPT0063430003
Tumor
1.0
CPT0108560003
Tumor
0.9
CPT0237690004
Tumor
0.9
CPT0234560003
Tumor
0.8
CPT0191710003
Tumor
0.7
CPT0237200004
Tumor
0.7
CPT0063480003
Tumor
0.7
CPT0197480003
Tumor
0.7
CPT0175390003
Tumor
0.6
CPT0204990003
Tumor
0.6
CPT0090440003
Tumor
0.6
CPT0175260003
Tumor
0.6
CPT0221200003
Tumor
0.6
CPT0023470003
Tumor
0.6
CPT0091610003
Tumor
0.6
CPT0079050003
Tumor
0.6
CPT0237060004
Tumor
0.6
CPT0236420003
Tumor
0.6
CPT0126810003
Tumor
0.6
CPT0191860003
Tumor
0.5
CPT0126830003
Normal
0.5
CPT0192540004
Tumor
0.5
CPT0202170003
Tumor
0.5
CPT0187370003
Tumor
0.5
CPT0147680004
Tumor
0.5
CPT0089880003
Tumor
0.5
CPT0130030003
Tumor
0.5
CPT0186180003
Tumor
0.5
CPT0241170003
Tumor
0.4
CPT0079100003
Tumor
0.4
CPT0219360003
Tumor
0.4
CPT0068280003
Tumor
0.4
CPT0218280003
Tumor
0.4
CPT0126390003
Tumor
0.4
CPT0086260003
Tumor
0.4
CPT0007740003
Tumor
0.4
CPT0202020008
Tumor
0.4
CPT0237970004
Tumor
0.4
CPT0175120003
Tumor
0.4
CPT0112650003
Tumor
0.4
CPT0227400003
Tumor
0.4
CPT0245780003
Tumor
0.4
CPT0208770003
Tumor
0.4
CPT0197210003
Tumor
0.3
CPT0087190003
Tumor
0.3
CPT0091820003
Tumor
0.3
CPT0098770003
Tumor
0.3
CPT0064040003
Tumor
0.3
CPT0232670003
Tumor
0.3
CPT0233600003
Tumor
0.3
CPT0234790003
Tumor
0.3
CPT0234930004
Tumor
0.2
CPT0197150003
Tumor
0.2
CPT0202530004
Tumor
0.2
CPT0108600003
Normal
0.2
CPT0126740003
Tumor
0.2
CPT0105420003
Tumor
0.2
CPT0238110004
Tumor
0.2
CPT0204600003
Tumor
0.2
CPT0001020003
Tumor
0.2
CPT0101130003
Tumor
0.2
CPT0112540003
Tumor
0.2
CPT0205000003
Normal
0.1
CPT0237410004
Tumor
0.1
CPT0068320003
Normal
0.1
CPT0209020004
Tumor
0.1
CPT0217420003
Tumor
0.1
CPT0187380003
Normal
0.1
CPT0245830003
Tumor
0.1
CPT0175560003
Tumor
0.1
CPT0146480004
Tumor
0.1
CPT0237550004
Tumor
0.1
CPT0197740003
Tumor
0.1
CPT0233320003
Tumor
0.1
CPT0010050003
Tumor
0.1
CPT0102790003
Tumor
0.0
CPT0117720003
Tumor
0.0
CPT0207210003
Tumor
0.0
CPT0227020003
Tumor
0.0
CPT0091050003
Tumor
0.0
CPT0190550003
Tumor
0.0
CPT0130410003
Tumor
0.0
CPT0222730003
Tumor
0.0
CPT0147180004
Tumor
0.0
CPT0225380003
Tumor
-0.1
CPT0123350003
Tumor
-0.1
CPT0104930003
Tumor
-0.1
CPT0221650003
Tumor
-0.1
CPT0146500003
Normal
-0.1
CPT0186140003
Normal
-0.1
CPT0202720003
Tumor
-0.1
CPT0197860003
Normal
-0.1
CPT0196810003
Tumor
-0.1
CPT0227070003
Normal
-0.2
CPT0128900003
Normal
-0.2
CPT0083980003
Tumor
-0.2
CPT0197380003
Normal
-0.2
CPT0104360003
Tumor
-0.2
CPT0069890003
Tumor
-0.2
CPT0195510003
Tumor
-0.2
CPT0128890003
Tumor
-0.2
CPT0197170003
Normal
-0.2
CPT0126450003
Tumor
-0.2
CPT0209490003
Tumor
-0.2
CPT0130270003
Tumor
-0.2
CPT0217490003
Normal
-0.2
CPT0245790003
Normal
-0.2
CPT0112660003
Normal
-0.2
CPT0221220003
Normal
-0.2
CPT0204800003
Tumor
-0.3
CPT0126530003
Tumor
-0.3
CPT0091090003
Normal
-0.3
CPT0102840003
Normal
-0.3
CPT0175410003
Normal
-0.3
CPT0209510003
Normal
-0.3
CPT0183250004
Tumor
-0.3
CPT0112720003
Tumor
-0.3
CPT0079060003
Normal
-0.3
CPT0238130003
Normal
-0.3
CPT0219390003
Normal
-0.3
CPT0233120003
Tumor
-0.3
CPT0208780003
Normal
-0.3
CPT0130440004
Normal
-0.3
CPT0111150004
Tumor
-0.3
CPT0237570003
Normal
-0.3
CPT0237780003
Normal
-0.3
CPT0147700003
Normal
-0.4
CPT0086270003
Normal
-0.4
CPT0112600003
Normal
-0.4
CPT0112550003
Normal
-0.4
CPT0130310003
Normal
-0.4
CPT0104380003
Normal
-0.4
CPT0236430003
Normal
-0.4
CPT0202400004
Normal
-0.4
CPT0098800003
Normal
-0.4
CPT0183270003
Normal
-0.4
CPT0146400003
Normal
-0.4
CPT0241210003
Normal
-0.4
CPT0209040003
Normal
-0.4
CPT0079110003
Normal
-0.4
CPT0222740003
Normal
-0.4
CPT0207250003
Normal
-0.4
CPT0245880003
Tumor
-0.4
CPT0010060003
Normal
-0.4
CPT0237990003
Normal
-0.5
CPT0237710003
Normal
-0.5
CPT0237760003
Tumor
-0.5
CPT0202220004
Normal
-0.5
CPT0091620003
Normal
-0.5
CPT0245840003
Normal
-0.5
CPT0126670003
Tumor
-0.5
CPT0204660003
Normal
-0.5
CPT0192590004
Normal
-0.5
CPT0245890003
Normal
-0.5
CPT0175160003
Normal
-0.5
CPT0218310003
Normal
-0.5
CPT0001030003
Normal
-0.5
CPT0023500003
Normal
-0.5
CPT0196820003
Normal
-0.5
CPT0223790003
Tumor
-0.5
CPT0232690003
Normal
-0.5
CPT0136640003
Tumor
-0.5
CPT0191750003
Normal
-0.5
CPT0237210003
Normal
-0.5
CPT0104950003
Normal
-0.5
CPT0007760003
Normal
-0.6
CPT0186210003
Normal
-0.6
CPT0234950004
Normal
-0.6
CPT0146380004
Tumor
-0.6
CPT0063440003
Normal
-0.6
CPT0130070003
Normal
-0.6
CPT0202040003
Normal
-0.6
CPT0227420003
Normal
-0.6
CPT0063500003
Normal
-0.6
CPT0186130003
Tumor
-0.6
CPT0126400003
Normal
-0.6
CPT0123370003
Normal
-0.6
CPT0112730003
Normal
-0.6
CPT0225470003
Normal
-0.7
CPT0064050003
Normal
-0.7
CPT0233160003
Normal
-0.7
CPT0202740003
Normal
-0.7
CPT0233640003
Normal
-0.7
CPT0087210003
Normal
-0.7
CPT0221660003
Normal
-0.7
CPT0126760003
Normal
-0.7
CPT0195520003
Normal
-0.7
CPT0105430003
Normal
-0.7
CPT0234820003
Normal
-0.7
CPT0175270003
Normal
-0.7
CPT0197520003
Normal
-0.8
CPT0126470003
Normal
-0.8
CPT0237430003
Normal
-0.8
CPT0117770003
Normal
-0.8
CPT0237080003
Normal
-0.8
CPT0147200003
Normal
-0.8
CPT0191930003
Normal
-0.9
CPT0111000004
Normal
-0.9
CPT0069900003
Normal
-0.9
CPT0202580004
Normal
-1.0
CPT0115830003
Tumor
-1.0
CPT0083990003
Normal
-1.0
CPT0136660003
Normal
-1.1
CPT0115860003
Normal
-1.1
CPT0204820003
Normal
-1.1
CPT0233330003
Normal
-1.1
CPT0197100003
Normal
-1.3
CPT0234580003
Normal
-1.4
CPT0223820003
Normal
-1.9
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LUNG CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.