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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC61B is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
302.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
754.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
668.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
657.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
629.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
617.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
616.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
600.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
567.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
555.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
551.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
551.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
546.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
542.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
541.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
541.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
532.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
522.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
515.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
512.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
501.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
499.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
498.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
492.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
491.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
487.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
483.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
482.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
475.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
475.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
467.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
466.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
456.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
451.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
450.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
431.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
426.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
426.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
425.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
423.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
422.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
415.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
410.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
406.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
401.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
400.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
398.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
398.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
396.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
396.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
391.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
390.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
390.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
388.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
387.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
387.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
385.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
384.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
383.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
382.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
381.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
380.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
377.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
376.9
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
376.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
375.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
373.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
372.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
371.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
370.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
368.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
368.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
368.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
366.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
366.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
366.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
364.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
363.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
363.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
362.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
361.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
359.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
358.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
358.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
357.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
356.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
356.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
355.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
355.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
354.9
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
354.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
354.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
353.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
352.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
351.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
350.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
349.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
349.6
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
347.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
346.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
345.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
345.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
344.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
344.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
344.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
344.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
342.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
341.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
341.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
339.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
337.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
337.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
336.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
335.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
335.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
333.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
331.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
330.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
330.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
330.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
329.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
329.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
329.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
328.5
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
328.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
328.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
327.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
326.9
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
325.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
324.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
323.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
319.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
319.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
319.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
319.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
317.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
316.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
316.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
315.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
314.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
314.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
314.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
313.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
313.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
312.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
312.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
309.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
309.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
309.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
307.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
307.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
306.4
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
306.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
305.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
305.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
304.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
304.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
304.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
303.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
303.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
303.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
302.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
302.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
302.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
299.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
298.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
298.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
296.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
296.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
295.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
292.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
292.3
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
292.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
292.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
291.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
291.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
291.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
290.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
289.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
289.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
288.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
287.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
287.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
287.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
286.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
286.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
285.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
285.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
284.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
284.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
283.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
283.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
283.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
283.6
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
282.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
281.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
281.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
280.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
278.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
278.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
277.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
277.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
277.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
276.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
276.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
275.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
274.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
273.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
272.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
271.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
271.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
270.8
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
270.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
267.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
267.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
266.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
266.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
265.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
265.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
264.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
262.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
262.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
261.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
260.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
259.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
259.5
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
259.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
258.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
258.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
256.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
255.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
253.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
252.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
252.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
252.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
250.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
250.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
249.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
248.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
248.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
248.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
247.4
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
246.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
245.7
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
244.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
244.5
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
243.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
243.7
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
243.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
243.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
242.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
242.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
242.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
242.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
242.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
241.9
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
241.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
240.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
240.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
240.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
239.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
238.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
238.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
237.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
236.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
235.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
235.4
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
235.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
233.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
233.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
231.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
231.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
230.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
230.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
230.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
229.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
229.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
228.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
228.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
227.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
226.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
226.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
225.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
225.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
224.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
224.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
224.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
223.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
223.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
222.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
222.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
221.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
220.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
220.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
218.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
217.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
216.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
216.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
213.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
212.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
212.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
212.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
211.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
208.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
207.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
206.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
206.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
205.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
204.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
204.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
202.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
200.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
197.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
197.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
196.5
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
195.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
194.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
194.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
193.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
193.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
193.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
190.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
189.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
186.9
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
185.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
185.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
185.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
184.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
183.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
181.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
180.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
177.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
175.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
175.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
175.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
174.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
173.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
173.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
172.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
171.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
167.9
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
167.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
166.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
166.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
166.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
164.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
164.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
163.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
161.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
158.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
156.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
155.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
153.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
147.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
144.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
142.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
140.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
138.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
135.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
130.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
119.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
116.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC61B is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
195.1
Number of samples
231
Samples
Sample
Description
TPM
DO48741
0 years, male, NA, stage:3, alive, 240 days
528.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
517.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
405.5
DO45275
0 years, male, NA, stage:3, dead, 10 days
405.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
392.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
363.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
355.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
353.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
343.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
340.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
319.6
DO23539
0 years, male, NA, stage:1, alive, 1110 days
316.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
307.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
307.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
303.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
302.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
301.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
294.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
287.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
283.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
281.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
281.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
279.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
277.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
277.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
276.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
275.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
274.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
273.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
273.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
272.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
271.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
271.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
270.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
269.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
264.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
264.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
254.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
254.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
253.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
252.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
252.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
250.2
DO48717
0 years, male, NA, stage:4, dead, 180 days
250.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
248.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
246.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
246.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
245.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
245.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
242.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
240.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
239.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
239.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
239.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
236.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
235.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
232.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
231.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
227.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
227.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
227.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
224.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
223.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
220.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
219.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
219.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
219.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
218.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
217.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
217.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
216.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
214.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
214.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
214.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
214.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
214.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
213.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
213.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
210.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
210.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
210.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
209.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
208.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
208.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
208.2
DO45277
0 years, male, NA, stage:3, alive, 600 days
207.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
207.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
202.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
201.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
200.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
200.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
200.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
199.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
199.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
198.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
197.7
DO23551
0 years, male, NA, stage:3, dead, 150 days
196.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
196.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
196.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
195.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
195.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
195.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
194.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
194.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
193.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
191.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
190.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
190.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
189.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
187.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
187.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
186.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
185.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
184.5
DO45092
0 years, male, NA, stage:4, dead, 1200 days
184.3
DO45127
0 years, male, NA, stage:3, dead, 420 days
184.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
183.8
DO45215
0 years, male, NA, stage:2, alive, 1170 days
180.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
180.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
180.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
179.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
177.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
177.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
176.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
175.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
173.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
173.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
172.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
171.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
171.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
170.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
170.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
169.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
169.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
167.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
166.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
166.8
DO48720
0 years, female, NA, stage:2, alive, 570 days
166.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
165.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
164.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
163.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
163.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
163.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
162.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
162.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
162.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
160.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
160.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
159.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
158.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
158.8
DO50803
0 years, female, NA, stage:1, alive, 540 days
158.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
158.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
156.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
156.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
156.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
155.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
155.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
154.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
154.1
DO23530
0 years, male, NA, stage:4, dead, 180 days
154.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
153.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
152.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
151.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
150.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
150.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
150.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
149.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
149.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
148.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
147.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
147.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
147.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
147.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
146.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
146.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
145.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
145.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
145.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
145.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
144.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
144.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
144.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
144.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
144.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
142.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
141.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
140.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
140.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
139.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
138.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
138.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
138.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
137.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
136.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
136.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
136.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
135.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
133.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
133.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
131.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
131.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
130.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
130.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
129.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
126.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
126.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
123.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
122.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
117.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
115.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
115.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
114.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
114.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
113.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
109.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
108.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
105.8
DO45137
0 years, male, NA, stage:1, alive, 1320 days
104.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
104.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
102.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
99.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
99.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
90.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
78.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
78.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
73.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
73.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
71.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
71.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
65.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
955
Tumor
0.6
327
Tumor
0.6
497
Tumor
0.6
481
Tumor
0.6
777
Tumor
0.6
554
Normal
0.5
1026
Normal
0.5
353
Tumor
0.5
474
Normal
0.5
518
Normal
0.5
494
Normal
0.5
467
Tumor
0.5
1022
Normal
0.5
944
Normal
0.5
484
Normal
0.5
452
Normal
0.5
1016
Normal
0.4
1042
Normal
0.4
218
Normal
0.4
937
Tumor
0.4
546
Normal
0.4
728
Normal
0.4
1028
Normal
0.4
557
Tumor
0.4
957
Tumor
0.4
952
Normal
0.4
982
Normal
0.4
1044
Normal
0.4
866
Normal
0.4
545
Tumor
0.4
412
Normal
0.4
135
Tumor
0.4
918
Normal
0.4
1025
Tumor
0.4
527
Tumor
0.4
214
Normal
0.4
824
Normal
0.4
878
Normal
0.4
968
Normal
0.4
212
Normal
0.4
858
Normal
0.4
136
Normal
0.4
864
Normal
0.3
857
Tumor
0.3
298
Normal
0.3
534
Normal
0.3
416
Normal
0.3
966
Normal
0.3
1046
Normal
0.3
1015
Tumor
0.3
1014
Normal
0.3
448
Normal
0.3
537
Tumor
0.3
462
Normal
0.3
284
Normal
0.3
258
Normal
0.3
922
Normal
0.3
431
Tumor
0.3
492
Normal
0.3
232
Normal
0.3
286
Normal
0.3
222
Normal
0.3
422
Normal
0.3
1021
Tumor
0.3
984
Normal
0.3
515
Tumor
0.3
528
Normal
0.3
267
Tumor
0.3
473
Tumor
0.3
786
Normal
0.3
446
Normal
0.3
524
Normal
0.3
696
Normal
0.3
113
Tumor
0.3
114
Normal
0.3
488
Normal
0.3
466
Normal
0.3
228
Normal
0.3
874
Normal
0.3
533
Tumor
0.3
472
Normal
0.3
965
Tumor
0.3
436
Normal
0.3
882
Normal
0.3
415
Tumor
0.3
964
Normal
0.2
851
Tumor
0.2
394
Normal
0.2
1027
Tumor
0.2
818
Normal
0.2
312
Normal
0.2
737
Tumor
0.2
852
Normal
0.2
698
Normal
0.2
745
Tumor
0.2
277
Tumor
0.2
195
Tumor
0.2
1032
Normal
0.2
145
Tumor
0.2
924
Normal
0.2
816
Normal
0.2
456
Normal
0.2
411
Tumor
0.2
523
Tumor
0.2
111
Normal
0.2
223
Tumor
0.2
746
Normal
0.2
914
Normal
0.2
778
Normal
0.2
395
Tumor
0.2
636
Normal
0.2
526
Normal
0.2
513
Tumor
0.2
493
Tumor
0.2
662
Normal
0.2
433
Tumor
0.2
142
Normal
0.2
392
Normal
0.2
663
Tumor
0.2
865
Tumor
0.2
278
Normal
0.2
956
Normal
0.2
358
Normal
0.2
558
Normal
0.2
331
Tumor
0.2
568
Normal
0.2
138
Normal
0.2
364
Normal
0.2
738
Normal
0.2
926
Normal
0.2
913
Tumor
0.2
426
Normal
0.2
137
Tumor
0.2
376
Normal
0.2
863
Tumor
0.2
272
Normal
0.2
538
Normal
0.2
396
Normal
0.2
132
Normal
0.2
958
Normal
0.2
722
Normal
0.2
525
Tumor
0.2
976
Normal
0.2
564
Normal
0.2
123
Tumor
0.2
616
Normal
0.2
642
Normal
0.2
355
Tumor
0.2
363
Tumor
0.2
386
Normal
0.2
756
Normal
0.2
755
Tumor
0.2
196
Normal
0.2
912
Normal
0.2
628
Normal
0.2
285
Tumor
0.2
356
Normal
0.2
257
Tumor
0.1
868
Normal
0.1
464
Normal
0.1
742
Normal
0.1
916
Normal
0.1
328
Normal
0.1
468
Normal
0.1
455
Tumor
0.1
981
Tumor
0.1
141
Tumor
0.1
124
Normal
0.1
421
Tumor
0.1
664
Normal
0.1
362
Normal
0.1
414
Normal
0.1
574
Normal
0.1
862
Normal
0.1
443
Tumor
0.1
221
Tumor
0.1
186
Normal
0.1
128
Normal
0.1
743
Tumor
0.1
963
Tumor
0.1
262
Normal
0.1
516
Normal
0.1
572
Normal
0.1
217
Tumor
0.1
923
Tumor
0.1
618
Normal
0.1
147
Tumor
0.1
368
Normal
0.1
978
Normal
0.1
727
Tumor
0.1
938
Normal
0.1
434
Normal
0.1
514
Normal
0.1
126
Normal
0.1
697
Tumor
0.1
617
Tumor
0.1
724
Normal
0.1
815
Tumor
0.1
482
Normal
0.1
553
Tumor
0.1
461
Tumor
0.1
146
Normal
0.0
131
Tumor
0.0
148
Normal
0.0
714
Normal
0.0
268
Normal
0.0
983
Tumor
0.0
314
Normal
0.0
365
Tumor
0.0
648
Normal
0.0
211
Tumor
0.0
231
Tumor
0.0
716
Normal
0.0
823
Tumor
0.0
487
Tumor
0.0
424
Normal
0.0
261
Tumor
0.0
517
Tumor
0.0
313
Tumor
0.0
445
Tumor
0.0
478
Normal
0.0
925
Tumor
0.0
463
Tumor
0.0
428
Normal
0.0
785
Tumor
0.0
483
Tumor
0.0
444
Normal
0.0
188
Normal
0.0
162
Normal
0.0
861
Tumor
0.0
1043
Tumor
0.0
471
Tumor
0.0
567
Tumor
0.0
686
Normal
0.0
723
Tumor
0.0
342
Normal
0.0
943
Tumor
0.0
366
Normal
0.0
224
Normal
0.0
615
Tumor
0.0
867
Tumor
0.0
125
Tumor
0.0
187
Tumor
0.0
975
Tumor
0.0
451
Tumor
0.0
817
Tumor
0.0
477
Tumor
0.0
388
Normal
0.0
536
Normal
0.0
672
Normal
0.0
352
Normal
0.0
172
Normal
0.0
332
Normal
0.0
387
Tumor
0.0
425
Tumor
0.0
915
Tumor
0.0
1013
Tumor
0.0
432
Normal
0.0
367
Tumor
0.0
977
Tumor
0.0
647
Tumor
-0.1
954
Normal
-0.1
112
Tumor
-0.1
921
Tumor
-0.1
191
Tumor
-0.1
666
Normal
-0.1
375
Tumor
-0.1
713
Tumor
-0.1
1045
Tumor
-0.1
341
Tumor
-0.1
873
Tumor
-0.1
161
Tumor
-0.1
354
Normal
-0.1
1031
Tumor
-0.1
535
Tumor
-0.1
423
Tumor
-0.1
213
Tumor
-0.1
435
Tumor
-0.1
192
Normal
-0.1
685
Tumor
-0.1
744
Normal
-0.1
297
Tumor
-0.1
385
Tumor
-0.1
344
Normal
-0.1
1041
Tumor
-0.1
814
Normal
-0.1
393
Tumor
-0.1
491
Tumor
-0.1
361
Tumor
-0.1
413
Tumor
-0.1
271
Tumor
-0.1
384
Normal
-0.2
695
Tumor
-0.2
573
Tumor
-0.2
465
Tumor
-0.2
311
Tumor
-0.2
571
Tumor
-0.2
498
Normal
-0.2
951
Tumor
-0.2
661
Tumor
-0.2
447
Tumor
-0.2
357
Tumor
-0.2
813
Tumor
-0.2
883
Tumor
-0.2
283
Tumor
-0.2
881
Tumor
-0.2
383
Tumor
-0.2
721
Tumor
-0.2
563
Tumor
-0.2
953
Tumor
-0.2
185
Tumor
-0.2
171
Tumor
-0.2
967
Tumor
-0.2
917
Tumor
-0.3
227
Tumor
-0.3
343
Tumor
-0.3
671
Tumor
-0.3
911
Tumor
-0.3
351
Tumor
-0.3
427
Tumor
-0.3
884
Normal
-0.3
741
Tumor
-0.4
715
Tumor
-0.4
627
Tumor
-0.4
127
Tumor
-0.4
635
Tumor
-0.5
665
Tumor
-0.6
877
Tumor
-0.6
641
Tumor
-0.6
391
Tumor
-0.8
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.