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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPI is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
321.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
939.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
785.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
754.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
752.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
685.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
622.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
600.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
596.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
566.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
541.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
526.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
512.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
480.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
470.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
431.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
412.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
402.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
362.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
356.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
347.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
340.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
327.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
324.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
318.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
316.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
308.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
302.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
277.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
269.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
268.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
265.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
254.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
252.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
252.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
246.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
240.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
239.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
237.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
230.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
227.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
226.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
224.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
222.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
217.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
211.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
207.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
205.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
203.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
202.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
202.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
199.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
185.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
179.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
168.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
167.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
162.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
137.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
128.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
128.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
107.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
98.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
53.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
48.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPI is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
199.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
680.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
642.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
590.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
580.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
495.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
491.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
464.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
448.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
443.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
437.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
426.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
425.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
420.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
407.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
405.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
402.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
401.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
401.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
398.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
396.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
393.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
393.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
392.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
386.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
382.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
380.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
379.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
377.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
373.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
369.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
368.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
363.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
363.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
355.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
352.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
348.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
347.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
345.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
345.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
343.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
342.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
341.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
340.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
340.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
338.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
334.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
332.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
330.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
330.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
329.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
326.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
325.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
323.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
321.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
321.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
320.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
320.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
319.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
319.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
318.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
313.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
310.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
310.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
310.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
310.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
309.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
307.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
306.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
306.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
304.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
301.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
301.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
299.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
297.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
296.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
290.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
289.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
288.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
287.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
287.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
285.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
284.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
284.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
281.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
280.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
279.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
278.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
278.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
277.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
276.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
274.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
274.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
273.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
273.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
271.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
271.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
270.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
269.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
269.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
268.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
268.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
264.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
263.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
263.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
263.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
263.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
263.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
262.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
261.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
260.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
259.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
258.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
258.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
256.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
256.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
256.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
254.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
253.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
253.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
253.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
252.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
251.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
251.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
251.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
250.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
250.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
250.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
250.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
250.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
249.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
248.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
247.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
246.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
246.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
245.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
245.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
244.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
244.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
244.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
244.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
244.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
243.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
243.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
243.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
243.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
242.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
242.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
240.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
240.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
240.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
240.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
239.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
238.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
238.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
238.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
237.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
236.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
235.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
235.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
234.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
233.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
233.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
230.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
229.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
229.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
229.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
229.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
228.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
228.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
227.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
227.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
227.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
226.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
226.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
224.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
224.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
224.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
223.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
221.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
221.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
221.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
221.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
221.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
220.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
220.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
220.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
219.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
218.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
218.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
217.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
217.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
217.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
217.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
216.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
214.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
214.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
214.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
213.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
213.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
213.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
212.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
212.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
212.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
211.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
210.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
210.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
210.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
209.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
209.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
209.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
209.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
209.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
208.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
208.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
208.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
208.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
208.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
207.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
206.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
206.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
205.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
205.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
205.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
204.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
204.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
204.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
203.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
203.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
202.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
201.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
201.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
199.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
199.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
199.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
198.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
198.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
196.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
196.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
195.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
195.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
195.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
195.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
195.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
195.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
194.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
194.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
194.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
194.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
193.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
193.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
193.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
193.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
192.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
192.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
190.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
190.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
189.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
189.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
189.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
189.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
189.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
189.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
189.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
188.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
188.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
188.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
187.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
186.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
186.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
186.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
186.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
185.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
185.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
185.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
184.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
183.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
183.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
182.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
182.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
182.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
182.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
182.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
181.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
180.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
180.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
180.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
180.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
180.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
179.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
179.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
179.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
178.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
178.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
178.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
177.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
177.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
176.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
176.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
176.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
175.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
175.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
175.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
174.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
174.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
174.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
174.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
174.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
173.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
172.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
171.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
171.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
171.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
171.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
171.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
170.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
169.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
168.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
168.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
168.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
166.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
166.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
166.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
165.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
164.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
164.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
162.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
162.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
162.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
161.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
161.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
160.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
160.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
160.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
160.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
160.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
159.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
159.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
159.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
159.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
159.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
158.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
158.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
158.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
157.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
157.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
156.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
155.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
154.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
153.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
152.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
152.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
152.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
152.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
151.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
151.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
150.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
149.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
149.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
148.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
148.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
148.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
148.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
147.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
147.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
146.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
146.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
145.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
145.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
145.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
144.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
144.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
142.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
142.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
141.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
141.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
141.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
140.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
140.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
140.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
140.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
139.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
139.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
139.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
138.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
138.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
138.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
137.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
136.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
136.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
136.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
135.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
135.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
134.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
133.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
133.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
133.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
133.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
133.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
133.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
132.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
132.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
132.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
132.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
131.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
130.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
129.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
127.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
126.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
126.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
125.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
125.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
125.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
125.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
125.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
125.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
123.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
123.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
122.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
122.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
120.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
120.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
120.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
119.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
119.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
118.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
117.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
116.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
114.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
114.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
113.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
112.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
112.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
111.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
111.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
110.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
110.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
109.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
109.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
108.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
108.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
107.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
107.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
106.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
105.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
103.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
103.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
101.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
101.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
101.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
101.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
99.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
98.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
97.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
97.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
94.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
94.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
93.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
92.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
92.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
91.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
90.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
90.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
90.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
90.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
89.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
89.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
88.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
86.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
86.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
86.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
85.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
85.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
84.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
84.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
83.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
83.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
83.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
82.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
79.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
79.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
78.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
75.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
74.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
74.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
72.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
68.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
66.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
66.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
65.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
65.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
65.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
64.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
64.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
63.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
62.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
62.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
62.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
61.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
59.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
57.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
57.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
56.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
56.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
53.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
53.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
49.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
47.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
46.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
46.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
44.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
42.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
42.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
42.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
39.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
36.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
35.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
32.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
32.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
24.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
17.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPI is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
208.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
497.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
492.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
455.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
417.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
407.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
382.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
365.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
359.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
344.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
328.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
323.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
301.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
301.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
289.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
288.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
284.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
273.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
271.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
270.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
269.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
269.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
255.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
254.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
254.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
248.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
246.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
243.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
242.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
242.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
242.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
241.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
240.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
238.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
237.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
230.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
217.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
216.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
213.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
207.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
205.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
205.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
200.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
199.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
196.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
196.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
196.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
194.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
188.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
188.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
188.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
186.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
181.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
179.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
175.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
174.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
174.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
172.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
170.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
170.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
169.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
169.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
167.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
165.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
165.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
164.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
163.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
162.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
161.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
156.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
156.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
153.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
153.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
153.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
152.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
151.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
150.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
149.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
145.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
141.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
139.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
139.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
139.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
138.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
137.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
136.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
135.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
135.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
132.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
131.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
128.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
127.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
120.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
111.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
107.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
104.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
100.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
95.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
90.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPI is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
213.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
1405.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
877.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
793.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
776.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
734.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
723.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
696.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
647.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
549.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
533.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
528.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
506.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
496.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
494.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
479.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
477.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
467.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
460.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
459.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
448.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
441.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
432.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
420.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
416.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
404.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
399.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
399.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
382.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
376.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
370.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
369.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
365.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
359.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
359.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
359.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
350.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
349.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
345.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
344.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
340.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
337.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
336.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
335.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
335.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
325.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
316.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
316.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
314.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
307.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
305.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
303.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
301.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
299.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
297.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
293.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
292.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
291.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
286.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
284.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
281.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
278.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
278.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
275.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
274.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
273.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
264.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
264.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
261.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
259.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
255.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
254.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
253.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
250.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
249.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
248.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
248.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
246.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
246.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
245.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
245.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
244.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
243.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
242.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
240.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
240.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
239.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
236.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
235.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
232.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
231.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
230.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
230.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
228.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
226.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
225.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
225.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
224.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
224.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
222.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
222.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
221.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
221.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
220.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
219.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
218.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
215.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
214.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
212.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
211.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
210.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
209.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
206.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
206.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
205.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
204.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
203.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
202.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
202.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
199.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
198.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
197.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
195.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
194.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
193.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
193.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
193.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
192.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
192.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
192.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
191.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
191.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
186.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
181.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
181.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
181.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
179.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
179.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
178.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
177.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
177.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
176.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
175.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
175.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
174.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
174.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
173.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
172.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
172.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
172.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
169.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
168.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
167.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
167.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
166.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
164.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
164.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
164.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
162.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
161.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
161.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
161.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
161.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
161.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
160.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
156.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
154.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
153.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
153.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
152.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
150.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
150.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
149.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
148.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
148.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
148.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
147.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
146.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
145.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
143.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
142.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
141.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
137.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
137.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
137.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
137.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
136.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
135.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
134.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
134.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
134.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
134.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
133.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
133.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
132.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
132.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
132.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
130.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
130.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
130.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
129.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
129.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
129.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
128.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
127.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
127.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
127.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
125.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
124.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
123.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
121.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
121.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
121.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
121.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
120.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
119.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
117.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
117.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
117.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
116.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
116.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
115.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
114.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
114.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
113.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
112.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
111.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
107.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
107.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
106.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
106.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
105.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
103.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
101.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
100.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
99.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
98.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
97.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
97.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
95.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
95.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
92.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
90.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
90.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
89.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
87.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
86.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
85.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
82.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
82.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
82.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
80.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
79.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
77.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
76.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
73.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
73.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
70.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
69.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
64.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
63.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
61.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
61.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
58.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
57.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
55.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
52.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
52.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
50.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
49.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
48.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
48.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
44.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
43.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
39.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
35.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
31.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
30.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
29.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
29.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
25.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
23.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
13.7
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0071150004
Tumor
0.9
CPT0000870016
Tumor
0.9
CPT0012900004
Tumor
0.9
CPT0088690003
Tumor
0.9
CPT0079270003
Tumor
0.8
CPT0076330003
Tumor
0.8
CPT0001500009
Tumor
0.8
CPT0012370003
Tumor
0.8
CPT0025880003
Tumor
0.8
CPT0025290003
Tumor
0.8
CPT0002350011
Tumor
0.7
CPT0089460004
Tumor
0.7
CPT0026410003
Tumor
0.7
CPT0000640003
Tumor
0.7
CPT0078830003
Tumor
0.7
CPT0025580004
Tumor
0.7
CPT0065930003
Tumor
0.7
CPT0078990003
Tumor
0.6
CPT0077490003
Tumor
0.6
CPT0079180003
Tumor
0.6
CPT0063320003
Tumor
0.6
CPT0009000003
Tumor
0.6
CPT0069000003
Tumor
0.6
CPT0081990003
Tumor
0.6
CPT0079480003
Tumor
0.6
CPT0019130003
Tumor
0.6
CPT0078660003
Tumor
0.6
CPT0010160003
Tumor
0.6
CPT0077110003
Tumor
0.6
CPT0025110003
Tumor
0.6
CPT0065750003
Tumor
0.5
CPT0006630003
Tumor
0.5
CPT0087040003
Tumor
0.5
CPT0015810003
Tumor
0.5
CPT0086030003
Tumor
0.5
CPT0025050003
Tumor
0.5
CPT0065810003
Tumor
0.5
CPT0065430003
Tumor
0.5
CPT0000780007
Tumor
0.4
CPT0065690003
Tumor
0.4
CPT0015730003
Tumor
0.4
CPT0079230003
Tumor
0.4
CPT0088760003
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0001540009
Tumor
0.4
CPT0002270011
Tumor
0.4
CPT0079380003
Tumor
0.4
CPT0077310003
Tumor
0.4
CPT0078930003
Tumor
0.4
CPT0025350003
Tumor
0.4
CPT0081600003
Tumor
0.4
CPT0023350003
Tumor
0.4
CPT0024670003
Tumor
0.4
CPT0079410003
Tumor
0.4
CPT0088480003
Tumor
0.4
CPT0007320003
Tumor
0.3
CPT0006900003
Tumor
0.3
CPT0006440003
Tumor
0.3
CPT0014370004
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0092290003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0064370003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0092790003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0088970003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0001340003
Tumor
0.2
CPT0001180009
Tumor
0.2
CPT0007860003
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0081880003
Tumor
0.1
CPT0012550003
Tumor
0.1
CPT0084560003
Tumor
0.0
CPT0069160003
Tumor
0.0
CPT0001260009
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0092160003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0088900003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0078800003
Tumor
-0.1
CPT0017850003
Tumor
-0.1
CPT0075560003
Tumor
-0.1
CPT0065870003
Tumor
-0.1
CPT0077500001
Normal
-0.2
CPT0076350001
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0088630003
Tumor
-0.2
CPT0025610001
Normal
-0.3
CPT0017410003
Tumor
-0.3
CPT0000790001
Normal
-0.3
CPT0024680001
Normal
-0.3
CPT0012570003
Normal
-0.3
CPT0009080003
Normal
-0.3
CPT0082010001
Normal
-0.3
CPT0001350001
Normal
-0.3
CPT0002370001
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0012090003
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0009020003
Normal
-0.3
CPT0015910003
Tumor
-0.3
CPT0066430001
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0063330001
Normal
-0.3
CPT0012640003
Normal
-0.3
CPT0081620001
Normal
-0.3
CPT0078940001
Normal
-0.3
CPT0085670003
Tumor
-0.3
CPT0014350001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0087050003
Normal
-0.3
CPT0078510003
Tumor
-0.3
CPT0006950001
Normal
-0.3
CPT0012920003
Normal
-0.3
CPT0079510001
Normal
-0.3
CPT0089480003
Normal
-0.3
CPT0025920001
Normal
-0.3
CPT0023360001
Normal
-0.3
CPT0012770003
Normal
-0.4
CPT0063630003
Tumor
-0.4
CPT0088640003
Normal
-0.4
CPT0001550001
Normal
-0.4
CPT0064400001
Normal
-0.4
CPT0092310003
Normal
-0.4
CPT0078670001
Normal
-0.4
CPT0020020001
Normal
-0.4
CPT0069010001
Normal
-0.4
CPT0092800003
Normal
-0.4
CPT0078840001
Normal
-0.4
CPT0018250001
Normal
-0.4
CPT0019160001
Normal
-0.4
CPT0079000001
Normal
-0.4
CPT0066520001
Normal
-0.4
CPT0001230001
Normal
-0.4
CPT0063640001
Normal
-0.4
CPT0017450001
Normal
-0.4
CPT0010170001
Normal
-0.4
CPT0075570001
Normal
-0.4
CPT0089040001
Normal
-0.4
CPT0012290003
Normal
-0.4
CPT0088570001
Normal
-0.4
CPT0007470001
Normal
-0.4
CPT0001510001
Normal
-0.4
CPT0001190001
Normal
-0.4
CPT0086830003
Normal
-0.4
CPT0000890001
Normal
-0.4
CPT0092740003
Normal
-0.4
CPT0009060003
Tumor
-0.4
CPT0079300001
Normal
-0.4
CPT0025060001
Normal
-0.4
CPT0069190001
Normal
-0.4
CPT0086370003
Normal
-0.4
CPT0006530001
Normal
-0.4
CPT0088780001
Normal
-0.4
CPT0007870001
Normal
-0.5
CPT0088710001
Normal
-0.5
CPT0020130001
Normal
-0.5
CPT0013790003
Normal
-0.5
CPT0014130001
Normal
-0.5
CPT0006730001
Normal
-0.5
CPT0077140001
Normal
-0.5
CPT0086890003
Normal
-0.5
CPT0086970003
Normal
-0.5
CPT0078530001
Normal
-0.5
CPT0000660001
Normal
-0.5
CPT0010120001
Normal
-0.5
CPT0075170001
Normal
-0.6
CPT0065820001
Normal
-0.6
CPT0086870003
Tumor
-0.6
CPT0084590001
Normal
-0.6
CPT0092190003
Normal
-0.7
CPT0077320001
Normal
-0.7
CPT0012180003
Tumor
-0.7
CPT0088550004
Tumor
-0.7
CPT0001270001
Normal
-0.7
CPT0086950003
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.