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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
80.4
nTPM
GTEx:
80.4
nTPM
FANTOM5:
355.5
Scaled Tags Per Million
Pig:
141.2
nTPM
Mouse:
295.8
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
80.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 80.4
Samples: 105
Max nTPM: 142.3
Min nTPM: 27.3
Std nTPM: 24.4
Median nTPM:
218_1
71 years, female
142.3
322_1
76 years, male
132.1
320_1
89 years, female
123.4
452_1
88 years, female
121.8
237_1
82 years, male
120.2
375_1
74 years, female
118.9
506_1
65 years, male
117.5
353_1
82 years, female
113.1
321_1
62 years, female
112.4
243_1
75 years, male
112.3
386_1
76 years, male
111.8
379_1
60 years, male
111.7
351_1
91 years, male
108.7
377_1
82 years, female
108.7
354_1
81 years, female
107.3
319_1
81 years, male
106.7
447_1
81 years, male
103.5
356_1
87 years, female
103.4
503_1
68 years, male
101.5
352_1
62 years, male
100.4
295_1
61 years, female
99.9
264_1
73 years, female
98.8
316_1
62 years, male
98.0
347_1
72 years, male
97.8
335_1
73 years, female
97.7
350_1
84 years, female
97.7
4_1
88 years, female
97.1
173_1
67 years, male
97.1
163_1
78 years, male
96.3
396_1
62 years, male
95.6
425_1
59 years, female
95.3
172_1
72 years, female
94.8
189_1
76 years, male
93.1
376_1
75 years, female
92.3
349_1
83 years, male
91.3
292_1
71 years, male
91.1
293_1
68 years, female
91.0
348_1
84 years, male
89.8
480_1
63 years, male
89.3
404_1
82 years, female
89.2
384_1
83 years, male
88.6
355_1
70 years, female
88.5
99_1
64 years, male
87.6
317_1
60 years, male
87.5
517_1
88 years, male
87.3
17_1
71 years, male
87.1
526_1
61 years, male
86.7
518_1
75 years, female
86.3
229_1
69 years, female
85.8
177_1
74 years, male
85.5
405_1
91 years, male
84.8
389_1
86 years, female
84.5
314_1
67 years, male
84.4
251_1
78 years, male
83.9
291_1
76 years, male
83.5
318_1
68 years, male
83.5
406_1
79 years, male
81.3
120_1
70 years, female
80.8
2_1
77 years, female
79.1
286_1
68 years, female
79.1
394_1
75 years, female
78.9
6_1
73 years, female
78.8
266_1
85 years, male
78.7
35_1
74 years, female
78.2
265_1
87 years, male
75.9
217_1
76 years, male
73.8
145_1
84 years, male
72.8
468_1
89 years, male
71.8
288_1
66 years, female
71.7
311_1
78 years, male
71.4
307_1
66 years, female
70.9
254_1
77 years, female
70.0
324_1
76 years, male
69.9
153_1
70 years, female
67.6
246_1
77 years, male
67.1
313_1
79 years, female
66.3
137_1
83 years, male
65.6
18_1
88 years, male
62.8
499_1
55 years, female
62.0
115_1
83 years, male
61.6
315_1
62 years, female
60.5
109_1
81 years, female
60.1
42_1
85 years, male
58.3
139_1
64 years, female
56.2
41_1
94 years, female
55.6
9_1
66 years, female
54.4
126_1
63 years, male
52.3
117_1
61 years, male
51.6
142_1
61 years, female
51.0
81_1
67 years, male
49.5
501_1
88 years, male
48.6
495_1
57 years, female
47.0
32_1
67 years, male
46.8
414_1
84 years, female
45.7
415_1
77 years, female
45.4
43_1
64 years, female
44.1
162_1
79 years, female
42.5
119_1
70 years, female
41.8
466_1
57 years, female
40.8
308_1
70 years, female
40.2
89_1
63 years, male
35.2
413_1
59 years, female
34.3
491_1
89 years, female
33.5
490_1
67 years, female
32.9
149_1
88 years, male
27.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
