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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
510.5
nTPM
HPA Brain:
339.4
nTPM
GTEx:
510.5
nTPM
FANTOM5:
341.1
Scaled Tags Per Million
Pig:
303.7
nTPM
Mouse:
465.2
nTPM
Allen mouse:
17.8
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
339.4
Sample id
Sample description
nTPM
Amygdala nTPM: 291.7
2814
Male, age 76, right hemisphere
391.3
2695
Female, age 67, right hemisphere
294.1
2517
Female, age 94, left hemisphere
276.9
1987
Female, age 91, left hemisphere
263.9
2514
Male, age 75, right hemisphere
232.0
Basal amygdala nTPM: 339.4
2827
Female, age 67, right hemisphere
380.7
2609
Male, age 75, right hemisphere
373.3
2685
Female, age 94, left hemisphere
354.0
1955
Male, age 76, both hemispheres
341.3
2243
Female, age 91, right hemisphere
299.8
2110
Male, age 80, left hemisphere
287.4
Central amygdala nTPM: 334.4
2826
Female, age 94, left hemisphere
511.3
1905
Male, age 76, both hemispheres
388.0
2239
Male, age 80, left hemisphere
279.0
2515
Male, age 75, right hemisphere
254.1
2701
Female, age 91, right hemisphere
239.5
Corticomedial amygdala nTPM: 278.3
2829
Male, age 80, left hemisphere
359.3
2535
Female, age 67, right hemisphere
307.6
2428
Male, age 75, right hemisphere
286.3
2429
Female, age 94, left hemisphere
260.5
2242
Female, age 91, right hemisphere
232.9
2240
Male, age 76, both hemispheres
223.4
Lateral amygdala nTPM: 331.4
2534
Female, age 94, left hemisphere
454.9
1883
Male, age 76, both hemispheres
391.6
2256
Male, age 80, left hemisphere
324.9
2830
Female, age 67, right hemisphere
297.4
2516
Male, age 75, right hemisphere
282.9
2255
Female, age 91, right hemisphere
236.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
510.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 510.5
Samples: 152
Max nTPM: 1572.4
Min nTPM: 135.1
Std nTPM: 196.5
Median nTPM: 481.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
1572.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
1140.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
1136.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
956.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
914.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
855.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
848.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
823.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
793.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
792.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
785.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
783.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
782.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
765.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
750.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
749.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
743.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
739.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
719.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
714.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
705.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
704.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
700.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
688.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
688.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
680.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
679.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
672.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
670.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
665.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
661.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
661.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
657.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
653.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
628.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
619.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
619.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
611.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
603.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
600.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
599.6
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
594.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
577.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
570.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
568.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
567.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
562.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
558.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
557.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
552.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
549.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
548.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
548.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
540.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
539.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
530.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
529.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
528.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
524.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
520.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
518.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
517.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
516.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
515.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
508.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
502.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
500.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
500.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
497.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
494.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
487.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
486.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
485.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
485.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
484.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
482.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
480.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
478.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
477.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
474.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
474.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
469.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
468.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
465.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
463.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
460.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
456.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
454.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
453.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
452.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
451.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
444.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
439.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
438.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
437.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
435.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
431.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
426.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
425.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
416.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
416.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
415.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
415.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
407.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
398.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
395.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
393.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
392.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
391.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
390.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
387.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
382.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
377.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
377.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
376.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
375.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
375.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
374.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
374.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
365.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
365.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
364.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
357.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
356.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
354.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
329.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
328.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
323.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
323.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
323.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
321.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
320.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
316.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
303.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
300.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
295.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
295.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
293.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
290.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
286.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
282.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
279.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
275.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
264.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
262.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
259.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
239.7
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
238.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
237.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
236.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
185.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
135.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
465.2
Mouse sample
Sample description
nTPM
Amygdala nTPM: 465.3
Samples: 4
Max nTPM: 536.5
Min nTPM: 428.7
Sample A
Male
461.8
Sample B
Male
434.0
Sample C
Female
536.5
Sample D
Female
428.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.