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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
389.8
nTPM
FANTOM5:
417.1
Scaled Tags Per Million
Pig:
392.6
nTPM
Allen mouse:
13.7
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
389.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 244.7
1984
Male, age 76, both hemispheres
323.3
2301
Female, age 85, both hemispheres
273.5
2188
Female, age 91, both hemispheres
207.9
2090
Male, age 80, both hemispheres
174.1
Dorsal cochlear nucleus nTPM: 261.8
2802
Male, age 74, right hemisphere
381.2
2187
Female, age 91, both hemispheres
250.6
2370
Male, age 61, both hemispheres
244.3
2058
Male, age 76, both hemispheres
226.0
2378
Male, age 80, both hemispheres
206.7
Dorsal tegmental nucleus nTPM: 262.4
2083
Male, age 80, both hemispheres
302.8
1936
Male, age 76, left hemisphere
278.9
2358
Male, age 61, both hemispheres
259.8
2326
Male, age 74, both hemispheres
208.0
Dorsolateral tegmental area nTPM: 221.1
2654
Male, age 80, both hemispheres
310.0
2141
Male, age 76, both hemispheres
244.5
2751
Female, age 85, both hemispheres
223.0
2337
Male, age 61, both hemispheres
168.7
2360
Male, age 74, both hemispheres
159.2
Kolliker-Fuse nucleus nTPM: 268.0
2793
Female, age 91, left hemisphere
310.3
2163
Male, age 80, both hemispheres
254.2
2315
Male, age 76, right hemisphere
239.3
Lateral lemniscal nuclei nTPM: 352.3
2036
Male, age 80, both hemispheres
410.0
2169
Male, age 76, both hemispheres
390.9
2746
Female, age 85, left hemisphere
368.3
2453
Male, age 74, right hemisphere
311.5
2320
Female, age 91, left hemisphere
280.8
Lateral parabrachial nucleus nTPM: 269.9
2139
Female, age 85, right hemisphere
395.3
2013
Male, age 80, both hemispheres
276.6
2790
Male, age 61, both hemispheres
240.4
2792
Male, age 76, both hemispheres
167.4
Lateral vestibular nucleus nTPM: 239.8
2184
Male, age 76, both hemispheres
250.8
2311
Male, age 80, both hemispheres
228.9
Locus coeruleus nTPM: 262.0
2123
Female, age 91, both hemispheres
309.4
2720
Male, age 74, both hemispheres
287.6
2014
Male, age 55, unknown
283.7
2162
Male, age 80, both hemispheres
244.4
2317
Female, age 72, unknown
240.2
1980
Male, age 76, both hemispheres
239.7
2788
Male, age 74, unknown
228.7
Medial parabrachial nucleus nTPM: 252.9
2854
Male, age 80, both hemispheres
267.7
2170
Female, age 91, both hemispheres
257.1
2786
Male, age 76, both hemispheres
255.7
2156
Male, age 61, both hemispheres
247.9
2463
Female, age 85, right hemisphere
236.2
Medial periolivary nuclei nTPM: 301.2
2171
Female, age 85, both hemispheres
461.2
2063
Male, age 76, both hemispheres
378.3
2458
Female, age 91, both hemispheres
245.5
2791
Male, age 74, right hemisphere
226.2
2081
Male, age 80, both hemispheres
194.5
Motor facial nucleus nTPM: 332.7
2062
Male, age 76, both hemispheres
444.7
2697
Female, age 85, both hemispheres
365.5
2795
Female, age 91, both hemispheres
347.2
2327
Male, age 80, both hemispheres
312.7
2365
Male, age 74, right hemisphere
268.7
2126
Male, age 61, both hemispheres
257.2
Motor trigeminal nucleus nTPM: 269.4
2560
Male, age 74, both hemispheres
316.3
2321
Female, age 91, both hemispheres
280.3
2079
Male, age 80, both hemispheres
264.9
2309
Male, age 76, both hemispheres
261.1
2335
Male, age 61, both hemispheres
224.3
Nuclei of the trapezoid body nTPM: 389.8
2735
Female, age 85, both hemispheres
500.6
1983
Male, age 76, both hemispheres
467.2
2159
Male, age 61, both hemispheres
408.5
2166
Male, age 80, both hemispheres
291.8
2368
Female, age 91, both hemispheres
280.7
Nucleus raphe magnus nTPM: 373.5
2172
Female, age 85, both hemispheres
467.0
2160
Male, age 61, both hemispheres
462.5
2051
Male, age 76, both hemispheres
379.9
2328
Male, age 80, both hemispheres
362.9
2455
Male, age 74, both hemispheres
306.4
2459
Female, age 91, both hemispheres
262.2
Paramedian reticular nucleus nTPM: 278.2
2050
Female, age 85, both hemispheres
403.7
2313
Male, age 61, both hemispheres
286.6
2052
Male, age 76, both hemispheres
214.6
2057
Male, age 80, both hemispheres
207.9
Pedunculopontine tegmental nucleus nTPM: 227.3
1921
Female, age 85, both hemispheres
286.2
2334
Male, age 80, both hemispheres
211.9
2338
Male, age 61, both hemispheres
183.7
Pontine nuclei nTPM: 361.8
2787
Female, age 85, both hemispheres
538.2
1968
Male, age 76, left hemisphere
468.5
1863
Male, age 55, unknown
416.2
2727
Male, age 61, right hemisphere
408.5
2109
Female, age 72, unknown
338.1
2115
Male, age 80, left hemisphere
275.0
2454
Male, age 74, left hemisphere
240.1
2319
Female, age 91, both hemispheres
209.4
Pontine raphe nucleus nTPM: 288.3
2853
Male, age 76, midline
288.4
2122
Female, age 85, midline
288.2
Posteroventral cochlear nucleus nTPM: 225.2
2752
Female, age 85, both hemispheres
270.8
2070
Male, age 76, both hemispheres
249.7
2371
Male, age 61, both hemispheres
247.9
2341
Male, age 80, both hemispheres
219.5
2135
Female, age 91, both hemispheres
138.3
Principal sensory trigeminal nucleus nTPM: 318.3
2158
Male, age 61, both hemispheres
415.0
2008
Male, age 80, left hemisphere
372.7
2324
Male, age 76, both hemispheres
263.6
2367
Female, age 91, left hemisphere
221.9
Reticular pontine nucleus, caudal nTPM: 309.5
2332
Male, age 80, right hemisphere
364.7
2092
Male, age 76, both hemispheres
332.9
2457
Female, age 91, both hemispheres
319.9
2559
Male, age 74, both hemispheres
220.5
Reticular pontine nucleus, oral nTPM: 275.0
2012
Female, age 85, both hemispheres
340.1
2361
Male, age 74, both hemispheres
293.6
2366
Female, age 91, both hemispheres
260.5
1939
Male, age 80, both hemispheres
254.8
2167
Male, age 76, both hemispheres
226.1
Reticulotegmental nucleus nTPM: 305.6
2452
Male, age 74, both hemispheres
312.1
2325
Male, age 76, both hemispheres
308.8
2333
Male, age 80, both hemispheres
306.9
2322
Female, age 91, both hemispheres
294.5
Spinal trigeminal nucleus, oral nTPM: 280.5
2737
Female, age 85, both hemispheres
305.3
2164
Male, age 80, both hemispheres
268.9
1978
Male, age 76, both hemispheres
267.3
Subcoeruleus area nTPM: 259.9
1958
Male, age 80, both hemispheres
323.1
2089
Male, age 76, left hemisphere
280.1
2323
Female, age 91, left hemisphere
257.9
2451
Male, age 74, both hemispheres
231.4
2369
Female, age 85, left hemisphere
207.1
Superior olive nTPM: 333.9
1875
Female, age 85, both hemispheres
443.0
2020
Male, age 76, both hemispheres
367.1
2329
Male, age 80, right hemisphere
329.4
2561
Female, age 91, both hemispheres
305.7
2364
Male, age 74, right hemisphere
224.3
Ventral periolivary nuclei nTPM: 340.4
2165
Male, age 80, both hemispheres
383.0
2130
Female, age 85, both hemispheres
354.8
2023
Male, age 76, both hemispheres
333.2
2794
Female, age 91, left hemisphere
290.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 280.4
1959
Male, age 76, both hemispheres
368.4
2449
Male, age 74, both hemispheres
307.2
2161
Male, age 80, both hemispheres
294.4
2840
Female, age 85, both hemispheres
277.5
2456
Female, age 91, both hemispheres
249.6
2359
Male, age 61, both hemispheres
185.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
392.6
Pig sample
Sample description
nTPM
Pons nTPM: 392.6
Samples: 4
Max nTPM: 578.2
Min nTPM: 275.6
Sample A
Female
578.2
Sample B
Female
275.6
Sample C
Male
321.5
Sample D
Male
395.2
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
