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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TIMP1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
144.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
2843.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
628.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
623.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
614.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
441.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
284.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
204.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
188.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
167.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
167.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
162.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
153.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
150.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
146.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
141.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
112.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
97.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
92.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
91.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
89.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
86.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
83.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
83.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
78.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
76.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
71.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
69.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
68.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
65.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
64.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
63.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
60.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
59.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
58.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
54.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
49.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
47.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
44.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
44.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
41.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
38.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
37.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
36.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
36.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
34.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
31.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
31.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
27.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
27.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
26.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
25.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
25.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
23.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
22.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
22.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
22.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
21.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
19.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
18.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
15.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
14.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
13.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
10.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TIMP1 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
822.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
13556.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
12337.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
4604.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
4190.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
3934.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
3509.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
3425.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
3288.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
3096.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
2762.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
2756.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
2688.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
2608.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
2434.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
2394.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
2364.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
2360.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
2334.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
2290.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
2268.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
2228.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
2213.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
2212.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
2168.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
1993.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
1976.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
1933.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
1843.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
1789.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
1762.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
1706.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
1697.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
1687.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
1683.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
1677.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
1648.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
1620.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
1613.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
1608.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1603.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
1592.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
1587.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
1580.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
1568.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
1565.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
1538.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
1536.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
1536.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
1527.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
1517.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
1502.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
1501.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
1500.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
1480.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
1472.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
1422.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
1420.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
1408.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
1377.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1371.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
1364.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
1363.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
1351.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
1348.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
1336.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
1320.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
1301.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
1288.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
1276.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
1274.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
1266.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
1255.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
1247.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
1234.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
1233.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
1222.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
1219.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
1219.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
1213.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
1213.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
1210.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
1206.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
1200.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
1198.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1196.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
1190.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
1185.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
1176.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
1166.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
1163.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
1154.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
1153.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
1153.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
1148.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
1140.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
1139.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
1138.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
1135.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
1131.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
1128.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
1124.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
1124.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1119.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
1116.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
1101.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
1091.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
1088.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
1074.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
1073.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
1072.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
1062.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
1060.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
1055.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
1053.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
1050.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
1049.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
1040.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
1033.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
1028.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
1023.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
1018.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
1016.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
1003.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
999.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
993.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
980.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
978.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
974.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
965.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
959.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
957.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
952.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
945.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
930.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
926.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
923.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
913.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
904.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
904.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
901.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
899.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
896.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
895.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
886.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
885.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
883.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
880.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
871.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
870.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
869.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
869.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
864.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
863.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
856.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
852.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
849.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
845.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
843.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
843.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
840.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
839.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
839.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
836.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
832.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
829.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
825.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
822.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
818.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
817.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
817.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
815.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
814.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
812.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
811.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
811.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
810.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
800.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
799.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
798.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
795.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
791.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
790.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
788.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
788.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
786.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
784.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
784.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
784.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
783.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
780.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
775.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
774.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
771.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
767.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
766.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
765.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
762.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
757.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
755.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
754.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
748.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
748.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
746.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
742.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
741.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
741.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
732.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
729.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
728.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
727.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
725.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
712.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
709.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
708.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
705.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
699.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
695.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
695.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
692.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
690.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
688.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
688.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
687.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
687.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
683.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
682.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
681.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
681.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
680.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
679.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
679.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
676.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
674.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
671.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
671.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
663.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
651.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
645.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
640.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
635.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
631.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
631.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
630.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
630.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
628.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
628.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
626.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
625.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
625.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
625.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
625.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
624.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
622.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
621.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
621.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
619.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
618.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
618.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
616.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
615.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
613.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
612.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
611.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
611.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
610.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
608.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
607.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
606.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
606.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
605.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
604.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
602.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
596.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
595.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
594.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
594.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
593.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
592.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
588.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
585.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
585.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
584.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
580.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
578.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
574.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
573.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
572.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
572.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
571.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
570.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
570.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
568.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
566.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
563.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
562.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
561.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
558.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
555.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
553.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
552.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
551.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
551.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
549.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
548.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
548.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
546.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
546.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
543.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
543.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
542.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
541.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
533.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
532.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
531.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
530.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
528.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
527.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
524.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
522.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
522.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
514.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
513.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
508.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
508.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
507.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
507.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
507.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
505.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
504.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
501.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
500.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
499.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
495.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
494.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
491.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
490.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
489.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
487.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
484.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
483.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
482.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
481.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
478.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
477.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
477.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
476.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
472.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
471.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
471.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
470.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
468.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
465.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
462.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
462.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
461.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
461.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
460.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
460.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
454.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
449.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
444.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
442.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
439.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
438.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
436.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
436.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
435.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
433.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
432.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
431.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
431.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
430.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
428.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
426.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
425.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
424.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
423.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
420.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
414.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
410.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
408.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
408.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
408.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
406.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
403.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
402.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
401.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
401.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
401.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
401.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
400.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
399.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
399.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
398.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
398.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
397.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
396.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
394.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
394.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
392.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
390.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
388.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
387.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
386.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
386.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
385.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
385.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
384.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
382.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
382.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
381.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
381.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
374.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
374.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
374.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
373.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
373.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
373.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
373.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
370.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
370.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
370.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
369.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
368.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
367.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
366.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
364.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
364.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
362.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
361.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
359.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
358.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
358.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
355.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
354.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
351.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
350.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
350.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
350.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
349.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
344.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
341.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
341.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
339.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
333.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
326.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
325.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
325.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
322.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
322.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
322.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
321.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
321.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
317.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
315.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
312.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
309.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
309.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
307.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
304.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
302.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
302.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
301.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
300.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
296.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
296.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
294.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
286.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
283.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
280.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
271.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
270.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
268.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
268.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
267.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
267.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
266.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
266.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
265.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
264.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
256.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
255.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
253.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
248.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
243.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
242.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
240.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
238.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
237.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
232.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
225.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
223.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
213.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
210.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
203.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
203.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
202.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
190.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
177.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
175.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
167.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
155.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
139.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
138.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
129.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
119.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
115.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
108.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
105.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
96.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
82.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
80.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
78.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
77.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
66.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
55.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
39.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
35.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
22.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
20.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TIMP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
519.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
6139.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
2687.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
1726.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
1360.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
1285.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
988.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
880.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
868.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
790.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
769.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
712.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
709.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
702.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
685.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
684.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
679.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
676.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
666.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
649.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
647.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
630.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
630.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
604.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
581.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
566.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
563.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
542.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
533.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
523.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
517.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
490.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
481.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
479.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
465.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
447.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
438.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
436.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
432.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
424.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
415.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
415.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
415.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
410.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
400.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
391.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
390.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
387.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
374.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
372.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
371.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
369.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
369.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
367.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
364.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
363.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
359.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
354.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
352.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
351.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
347.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
338.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
335.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
333.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
323.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
322.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
322.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
320.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
319.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
316.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
313.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
309.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
306.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
304.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
301.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
297.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
297.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
288.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
271.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
270.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
268.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
264.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
253.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
252.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
233.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
231.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
222.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
221.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
206.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
205.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
201.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
198.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
174.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
168.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
167.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
154.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
146.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
139.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
138.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
137.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TIMP1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
728.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
3588.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
2959.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
2596.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
2378.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
2372.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
2226.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
2138.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
1945.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
1785.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
1690.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
1626.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
1611.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
1600.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
1598.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
1578.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
1572.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
1570.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
1511.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
1505.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
1440.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
1425.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
1381.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1380.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
1358.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
1348.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
1330.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
1329.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
1322.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
1303.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
1302.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
1298.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
1292.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
1286.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
1262.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
1231.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
1210.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
1194.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
1180.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
1180.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
1166.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
1156.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
1133.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
1109.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
1109.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
1103.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
1100.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
1069.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
1056.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
1056.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
1046.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
1045.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
1043.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
1019.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
1016.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
1015.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
1014.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
1010.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
997.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
995.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
989.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
984.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
969.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
968.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
958.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
957.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
951.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
944.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
939.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
935.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
933.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
929.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
928.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
908.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
892.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
890.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
889.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
883.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
874.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
868.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
851.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
845.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
827.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
826.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
825.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
822.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
820.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
816.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
810.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
807.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
789.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
788.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
784.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
774.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
773.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
771.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
767.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
766.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
764.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
764.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
761.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
744.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
726.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
725.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
725.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
724.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
710.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
709.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
704.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
701.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
701.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
698.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
698.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
693.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
683.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
682.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
680.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
680.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
671.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
670.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
661.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
660.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
660.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
658.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
658.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
656.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
653.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
651.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
650.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
650.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
650.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
646.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
629.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
629.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
629.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
625.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
625.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
623.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
623.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
619.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
616.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
610.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
605.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
604.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
603.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
602.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
594.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
593.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
591.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
589.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
587.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
580.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
580.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
578.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
575.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
572.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
571.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
570.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
568.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
564.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
563.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
556.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
553.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
548.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
542.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
536.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
533.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
531.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
531.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
528.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
528.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
525.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
523.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
522.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
522.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
517.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
514.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
512.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
512.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
511.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
510.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
509.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
509.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
508.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
506.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
502.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
497.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
497.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
495.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
490.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
486.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
481.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
480.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
476.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
473.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
471.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
470.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
468.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
463.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
461.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
455.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
454.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
453.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
451.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
447.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
444.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
443.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
441.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
440.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
439.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
438.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
437.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
433.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
429.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
429.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
427.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
426.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
422.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
419.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
415.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
412.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
410.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
410.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
402.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
402.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
399.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
399.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
398.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
389.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
385.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
384.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
381.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
370.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
366.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
365.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
363.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
362.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
360.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
359.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
358.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
357.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
349.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
342.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
337.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
334.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
333.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
332.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
330.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
325.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
324.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
315.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
311.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
303.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
300.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
299.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
297.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
294.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
291.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
291.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
281.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
279.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
269.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
244.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
229.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
229.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
225.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
222.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
214.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
210.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
206.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
186.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
178.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
165.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
163.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
156.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
143.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
127.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
121.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
114.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
83.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
66.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
21.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
17.2
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0084560003
Tumor
3.1
CPT0076330003
Tumor
2.9
CPT0063630003
Tumor
2.4
CPT0000890001
Normal
1.8
CPT0069160003
Tumor
1.5
CPT0015910003
Tumor
1.3
CPT0026420001
Normal
1.3
CPT0092190003
Normal
1.3
CPT0011240003
Tumor
1.3
CPT0017410003
Tumor
1.2
CPT0081990003
Tumor
1.0
CPT0084590001
Normal
1.0
CPT0069000003
Tumor
1.0
CPT0017850003
Tumor
1.0
CPT0007860003
Tumor
1.0
CPT0075170001
Normal
1.0
CPT0088630003
Tumor
0.9
CPT0081600003
Tumor
0.9
CPT0000640003
Tumor
0.9
CPT0012670003
Tumor
0.8
CPT0012280003
Tumor
0.8
CPT0066480003
Tumor
0.7
CPT0023350003
Tumor
0.7
CPT0075130003
Tumor
0.7
CPT0010120001
Normal
0.7
CPT0079410003
Tumor
0.6
CPT0078510003
Tumor
0.6
CPT0012290003
Normal
0.6
CPT0077320001
Normal
0.5
CPT0092730003
Tumor
0.5
CPT0063320003
Tumor
0.5
CPT0078530001
Normal
0.4
CPT0085670003
Tumor
0.4
CPT0006530001
Normal
0.4
CPT0012550003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0025110003
Tumor
0.4
CPT0001190001
Normal
0.3
CPT0001260009
Tumor
0.3
CPT0000660001
Normal
0.3
CPT0001270001
Normal
0.3
CPT0020120003
Tumor
0.3
CPT0088690003
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0063330001
Normal
0.2
CPT0065690003
Tumor
0.2
CPT0088550004
Tumor
0.2
CPT0018250001
Normal
0.2
CPT0010110003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0001180009
Tumor
0.2
CPT0000790001
Normal
0.2
CPT0012080003
Tumor
0.2
CPT0011410003
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0069190001
Normal
0.1
CPT0065430003
Tumor
0.1
CPT0086950003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0012920003
Normal
0.0
CPT0024680001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0017450001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0075720003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0025350003
Tumor
-0.1
CPT0025880003
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0088760003
Tumor
-0.1
CPT0069010001
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0077310003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0089020003
Tumor
-0.2
CPT0065820001
Normal
-0.2
CPT0000870016
Tumor
-0.2
CPT0012090003
Normal
-0.2
CPT0092290003
Tumor
-0.2
CPT0009000003
Tumor
-0.2
CPT0013790003
Normal
-0.2
CPT0012770003
Normal
-0.3
CPT0001340003
Tumor
-0.3
CPT0065870003
Tumor
-0.3
CPT0092790003
Tumor
-0.3
CPT0025290003
Tumor
-0.3
CPT0075570001
Normal
-0.3
CPT0079510001
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0012180003
Tumor
-0.3
CPT0079000001
Normal
-0.3
CPT0088900003
Tumor
-0.3
CPT0092310003
Normal
-0.3
CPT0065930003
Tumor
-0.3
CPT0019130003
Tumor
-0.3
CPT0007320003
Tumor
-0.3
CPT0071150004
Tumor
-0.3
CPT0001220008
Tumor
-0.3
CPT0001540009
Tumor
-0.4
CPT0001350001
Normal
-0.4
CPT0023690003
Tumor
-0.4
CPT0014470001
Normal
-0.4
CPT0012900004
Tumor
-0.4
CPT0086370003
Normal
-0.4
CPT0079270003
Tumor
-0.4
CPT0092800003
Normal
-0.4
CPT0081880003
Tumor
-0.4
CPT0077110003
Tumor
-0.4
CPT0088500001
Normal
-0.4
CPT0020020001
Normal
-0.4
CPT0020130001
Normal
-0.4
CPT0081620001
Normal
-0.4
CPT0006440003
Tumor
-0.4
CPT0065750003
Tumor
-0.4
CPT0001550001
Normal
-0.4
CPT0088570001
Normal
-0.4
CPT0019990003
Tumor
-0.4
CPT0078940001
Normal
-0.4
CPT0086870003
Tumor
-0.4
CPT0012640003
Normal
-0.4
CPT0087050003
Normal
-0.5
CPT0025920001
Normal
-0.5
CPT0077500001
Normal
-0.5
CPT0088480003
Tumor
-0.5
CPT0014130001
Normal
-0.5
CPT0088920001
Normal
-0.5
CPT0012370003
Tumor
-0.5
CPT0007870001
Normal
-0.5
CPT0002270011
Tumor
-0.5
CPT0087040003
Tumor
-0.5
CPT0025060001
Normal
-0.5
CPT0006730001
Normal
-0.5
CPT0014350001
Normal
-0.5
CPT0001510001
Normal
-0.5
CPT0012570003
Normal
-0.5
CPT0010170001
Normal
-0.5
CPT0089460004
Tumor
-0.5
CPT0092160003
Tumor
-0.6
CPT0006950001
Normal
-0.6
CPT0000780007
Tumor
-0.6
CPT0009060003
Tumor
-0.6
CPT0009080003
Normal
-0.6
CPT0014370004
Tumor
-0.6
CPT0078800003
Tumor
-0.6
CPT0077490003
Tumor
-0.6
CPT0066470004
Tumor
-0.6
CPT0086890003
Normal
-0.6
CPT0086360003
Tumor
-0.6
CPT0025610001
Normal
-0.6
CPT0079480003
Tumor
-0.6
CPT0092740003
Normal
-0.6
CPT0019160001
Normal
-0.7
CPT0024670003
Tumor
-0.7
CPT0025170003
Tumor
-0.7
CPT0025050003
Tumor
-0.7
CPT0001500009
Tumor
-0.7
CPT0079300001
Normal
-0.7
CPT0007470001
Normal
-0.7
CPT0078930003
Tumor
-0.8
CPT0006900003
Tumor
-0.8
CPT0078830003
Tumor
-0.8
CPT0064370003
Tumor
-0.8
CPT0086030003
Tumor
-0.8
CPT0015810003
Tumor
-0.9
CPT0078840001
Normal
-0.9
CPT0025580004
Tumor
-0.9
CPT0088780001
Normal
-0.9
CPT0006630003
Tumor
-0.9
CPT0001230001
Normal
-1.0
CPT0065810003
Tumor
-1.0
CPT0079380003
Tumor
-1.0
CPT0088970003
Tumor
-1.0
CPT0023710001
Normal
-1.0
CPT0014450004
Tumor
-1.0
CPT0026410003
Tumor
-1.1
CPT0010160003
Tumor
-1.1
CPT0078660003
Tumor
-1.1
CPT0064400001
Normal
-1.2
CPT0079180003
Tumor
-1.2
CPT0089480003
Normal
-1.2
CPT0015730003
Tumor
-1.2
CPT0088640003
Normal
-1.3
CPT0078670001
Normal
-1.3
CPT0078990003
Tumor
-1.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
