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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USP11 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
56.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
135.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
100.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
99.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
97.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
94.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
94.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
92.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
91.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
91.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
84.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
81.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
80.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
80.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
77.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
76.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
72.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
70.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
65.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
65.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
65.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
64.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
63.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
63.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
62.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
62.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
61.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
60.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
58.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
57.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
57.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
55.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
53.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
53.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
51.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
49.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
48.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
48.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
47.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
45.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
45.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
45.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
45.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
45.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
42.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
41.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
36.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
35.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
34.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
34.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
34.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
33.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
31.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
31.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
29.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
29.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
29.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
28.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
28.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
27.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
25.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
25.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
25.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USP11 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
244.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
217.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
211.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
112.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
104.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
99.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
90.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
87.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
87.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
86.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
83.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
82.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
80.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
80.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
74.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
71.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
69.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
66.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
65.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
61.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
59.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
59.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
58.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
57.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
57.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
57.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
57.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
56.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
55.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
55.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
54.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
54.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
53.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
53.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
52.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
52.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
51.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
49.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
49.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
48.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
48.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
48.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
48.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
47.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
47.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
47.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
47.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
47.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
46.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
46.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
46.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
46.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
46.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
46.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
45.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
45.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
44.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
44.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
44.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
44.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
43.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
43.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
42.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
42.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
42.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
41.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
41.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
41.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
41.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
41.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
41.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
41.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
41.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
40.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
40.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
40.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
40.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
40.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
40.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
40.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
40.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
39.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
39.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
39.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
39.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
39.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
39.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
39.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
39.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
39.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
39.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
38.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
38.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
38.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
38.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
38.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
38.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
38.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
37.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
37.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
37.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
37.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
37.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
37.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
37.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
37.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
37.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
37.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
37.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
36.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
36.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
36.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
36.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
36.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
36.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
36.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
36.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
36.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
36.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
36.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
36.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
36.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
36.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
36.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
36.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
36.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
36.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
36.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
36.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
35.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
35.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
35.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
35.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
35.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
35.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
35.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
35.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
35.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
35.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
35.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
34.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
34.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
34.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
34.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
34.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
34.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
34.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
34.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
34.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
34.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
34.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
34.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
33.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
33.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
33.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
33.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
33.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
33.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
33.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
33.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
33.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
33.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
33.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
33.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
33.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
33.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
32.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
32.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
32.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
32.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
32.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
32.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
32.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
32.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
32.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
32.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
32.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
32.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
32.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
32.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
32.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
31.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
31.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
31.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
31.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
31.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
31.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
31.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
31.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
31.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
31.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
31.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
31.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
31.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
31.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
31.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
31.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
31.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
30.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
30.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
30.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
30.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
30.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
30.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
30.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
30.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
30.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
30.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
30.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
30.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
30.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
30.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
30.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
30.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
30.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
30.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
30.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
29.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
29.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
29.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
29.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
29.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
29.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
29.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
29.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
29.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
29.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
29.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
29.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
29.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
29.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
28.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
28.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
28.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
28.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
28.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
28.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
28.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
28.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
28.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
28.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
28.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
28.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
28.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
28.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
28.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
28.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
28.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
28.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
28.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
28.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
27.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
27.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
27.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
27.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
27.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
27.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
27.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
27.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
27.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
27.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
27.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
27.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
27.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
27.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
27.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
27.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
27.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
27.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
27.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
26.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
26.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
26.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
26.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
26.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
26.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
26.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
26.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
26.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
26.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
26.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
26.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
26.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
26.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
26.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
26.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
25.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
25.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
25.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
25.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
25.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
25.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
25.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
25.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
25.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
25.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
25.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
25.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
25.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
25.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
25.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
25.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
24.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
24.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
24.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
24.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
24.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
24.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
24.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
24.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
24.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
24.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
24.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
24.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
24.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
24.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
24.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
24.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
24.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
24.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
24.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
24.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
24.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
24.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
24.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
24.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
24.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
24.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
24.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
24.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
24.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
24.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
23.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
23.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
23.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
23.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
23.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
23.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
23.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
23.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
23.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
23.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
23.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
23.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
23.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
23.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
22.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
22.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
22.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
22.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
22.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
22.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
22.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
22.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
22.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
22.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
22.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
22.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
22.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
22.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
22.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
22.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
22.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
21.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
21.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
21.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
21.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
21.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
21.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
21.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
21.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
21.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
21.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
21.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
21.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
21.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
21.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
20.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
20.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
20.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
20.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
20.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
20.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
20.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
20.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
20.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
20.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
20.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
20.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
20.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
20.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
20.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
20.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
20.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
20.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
20.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
20.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
19.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
19.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
19.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
19.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
19.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
19.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
19.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
19.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
19.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
19.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
18.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
18.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
18.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
18.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
18.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
18.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
18.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
18.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
18.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
18.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
18.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
18.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
18.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
18.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
18.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
17.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
17.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
17.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
17.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
17.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
17.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
17.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
17.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
17.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
17.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
17.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
17.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
17.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
17.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
17.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
16.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
16.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
16.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
16.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
16.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
16.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
16.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
16.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
16.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
16.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
16.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
16.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
16.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
16.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
16.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
16.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
16.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
16.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
16.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
16.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
15.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
15.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
15.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
15.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
15.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
15.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
15.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
15.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
15.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
15.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
15.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
15.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
15.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
15.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
14.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
14.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
14.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
14.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
14.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
13.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
13.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
13.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
13.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
13.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
13.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
13.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
13.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
13.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
13.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
13.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
12.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
12.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
12.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
12.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
12.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
12.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
11.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
11.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
11.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
11.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
11.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
11.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
11.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
11.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
10.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
10.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
10.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
9.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
9.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
9.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
7.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
6.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
6.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
5.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
4.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USP11 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
75.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
44.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
38.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
38.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
37.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
36.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
35.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
34.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
34.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
33.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
33.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
33.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
32.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
32.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
31.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
31.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
30.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
30.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
30.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
30.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
30.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
29.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
29.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
28.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
28.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
27.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
27.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
27.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
27.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
27.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
26.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
26.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
25.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
25.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
25.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
25.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
25.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
25.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
25.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
25.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
25.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
24.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
24.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
23.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
23.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
23.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
22.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
22.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
22.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
21.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
21.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
21.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
21.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
21.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
21.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
21.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
20.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
20.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
20.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
19.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
19.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
19.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
19.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
18.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
18.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
18.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
18.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
18.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
18.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
18.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
18.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
18.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
17.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
17.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
17.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
17.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
17.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
16.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
16.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
16.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
16.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
16.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
16.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
15.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
15.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
14.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
14.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
14.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
14.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
14.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
13.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
13.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
12.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
11.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
10.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
10.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
9.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USP11 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
35.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
128.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
124.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
114.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
104.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
94.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
91.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
84.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
80.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
78.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
78.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
74.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
74.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
74.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
74.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
74.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
73.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
72.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
72.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
71.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
70.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
69.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
68.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
66.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
65.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
65.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
63.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
63.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
63.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
62.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
61.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
61.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
60.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
59.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
59.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
59.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
58.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
57.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
57.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
56.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
56.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
56.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
55.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
55.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
54.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
53.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
53.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
52.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
51.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
51.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
51.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
50.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
49.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
48.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
48.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
48.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
48.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
48.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
47.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
47.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
47.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
47.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
47.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
46.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
46.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
46.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
45.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
45.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
44.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
44.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
44.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
44.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
44.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
43.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
43.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
42.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
42.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
42.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
42.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
41.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
41.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
41.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
41.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
40.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
40.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
40.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
40.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
40.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
40.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
39.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
39.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
39.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
39.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
38.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
38.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
38.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
38.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
38.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
37.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
37.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
37.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
37.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
37.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
37.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
37.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
36.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
36.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
36.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
36.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
36.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
36.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
36.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
36.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
35.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
35.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
35.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
34.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
34.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
34.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
34.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
33.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
33.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
33.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
33.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
33.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
33.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
33.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
33.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
33.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
33.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
32.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
32.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
32.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
32.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
31.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
31.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
31.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
31.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
31.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
30.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
30.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
30.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
30.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
30.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
30.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
30.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
30.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
30.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
30.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
29.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
29.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
29.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
29.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
29.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
29.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
29.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
29.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
29.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
29.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
28.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
28.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
28.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
28.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
28.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
28.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
28.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
28.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
28.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
27.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
27.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
27.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
27.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
27.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
27.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
27.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
27.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
27.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
26.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
26.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
26.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
26.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
26.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
26.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
25.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
25.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
25.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
25.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
25.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
25.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
25.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
25.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
25.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
24.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
24.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
24.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
24.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
24.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
24.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
24.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
24.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
24.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
24.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
24.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
24.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
24.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
24.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
24.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
23.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
23.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
23.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
23.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
23.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
23.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
23.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
22.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
22.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
22.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
22.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
21.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
21.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
21.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
21.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
21.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
21.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
20.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
20.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
20.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
20.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
20.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
20.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
20.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
19.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
19.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
19.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
19.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
19.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
19.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
19.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
19.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
19.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
19.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
18.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
18.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
18.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
18.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
17.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
17.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
17.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
17.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
17.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
17.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
17.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
16.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
16.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
16.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
16.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
16.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
16.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
16.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
16.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
15.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
15.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
15.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
15.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
14.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
14.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
14.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
14.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
14.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
12.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
11.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
11.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
10.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
10.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
9.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
9.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
8.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
8.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
7.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
7.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
7.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
5.7
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
1.6
CPT0078660003
Tumor
1.3
CPT0001260009
Tumor
0.8
CPT0012180003
Tumor
0.8
CPT0012550003
Tumor
0.7
CPT0078930003
Tumor
0.6
CPT0088550004
Tumor
0.6
CPT0076330003
Tumor
0.5
CPT0078990003
Tumor
0.5
CPT0075130003
Tumor
0.5
CPT0025290003
Tumor
0.4
CPT0007860003
Tumor
0.4
CPT0079380003
Tumor
0.4
CPT0088970003
Tumor
0.4
CPT0012640003
Normal
0.4
CPT0066480003
Tumor
0.4
CPT0092190003
Normal
0.4
CPT0075560003
Tumor
0.4
CPT0079300001
Normal
0.4
CPT0075170001
Normal
0.4
CPT0078510003
Tumor
0.4
CPT0001270001
Normal
0.3
CPT0092290003
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0015910003
Tumor
0.3
CPT0079510001
Normal
0.3
CPT0014160003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0092790003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0009020003
Normal
0.2
CPT0002370001
Normal
0.2
CPT0001180009
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0069160003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0018250001
Normal
0.2
CPT0075570001
Normal
0.2
CPT0025170003
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0066470004
Tumor
0.2
CPT0066520001
Normal
0.2
CPT0065820001
Normal
0.2
CPT0088640003
Normal
0.2
CPT0065810003
Tumor
0.2
CPT0001550001
Normal
0.2
CPT0012920003
Normal
0.1
CPT0065690003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0012280003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0069190001
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0065430003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0017850003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0081880003
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0078670001
Normal
0.1
CPT0012770003
Normal
0.1
CPT0001230001
Normal
0.1
CPT0086970003
Normal
0.1
CPT0088500001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0002350011
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0084560003
Tumor
0.1
CPT0077140001
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0081990003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0063330001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0023360001
Normal
0.0
CPT0011240003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0017450001
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0088630003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0000790001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0000660001
Normal
0.0
CPT0086820003
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0065930003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0012670003
Tumor
0.0
CPT0007320003
Tumor
-0.1
CPT0066430001
Normal
-0.1
CPT0001340003
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0001500009
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0077110003
Tumor
-0.1
CPT0071150004
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0001540009
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0000780007
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0025050003
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0012370003
Tumor
-0.1
CPT0015810003
Tumor
-0.2
CPT0092800003
Normal
-0.2
CPT0024670003
Tumor
-0.2
CPT0009060003
Tumor
-0.2
CPT0011410003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0082010001
Normal
-0.2
CPT0079480003
Tumor
-0.2
CPT0023350003
Tumor
-0.2
CPT0006440003
Tumor
-0.2
CPT0092740003
Normal
-0.2
CPT0010160003
Tumor
-0.2
CPT0085670003
Tumor
-0.2
CPT0025110003
Tumor
-0.2
CPT0009000003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0026420001
Normal
-0.3
CPT0019130003
Tumor
-0.3
CPT0014450004
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0077310003
Tumor
-0.3
CPT0086950003
Tumor
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
