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HEAD AND NECK SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USP11 is not prognostic in Head and Neck Squamous Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.9
Number of samples
492
Samples
Sample
Description
TPM
TCGA-CV-5430-01A
0 years, male, white, stage:Stage IVA, alive, 4241 days
355.9
TCGA-CR-7370-01A
0 years, female, white, stage:'--, alive, 105 days
113.6
TCGA-CN-6997-01A
0 years, male, white, stage:Stage IVA, dead, 988 days
84.6
TCGA-BB-4225-01A
0 years, male, white, stage:'--, alive, 146 days
79.8
TCGA-QK-A6V9-01A
0 years, male, white, stage:Stage II, alive, 833 days
79.7
TCGA-DQ-7591-01A
0 years, male, white, stage:'--, alive, 622 days
76.7
TCGA-CQ-6221-01A
0 years, male, white, stage:'--, alive, 1000 days
68.8
TCGA-QK-AA3K-01A
0 years, male, black or african american, stage:Stage IVA, alive, 253 days
67.1
TCGA-CR-7374-01A
0 years, female, white, stage:'--, alive, 30 days
65.9
TCGA-CN-6994-01A
0 years, male, white, stage:Stage IVA, alive, 1183 days
65.7
TCGA-CV-7100-01A
0 years, male, white, stage:Stage III, dead, 274 days
64.3
TCGA-BA-5153-01A
0 years, male, white, stage:'--, dead, 1762 days
63.5
TCGA-D6-A6EP-01A
0 years, male, white, stage:Stage III, alive, 424 days
63.3
TCGA-CR-6473-01A
0 years, male, white, stage:'--, alive, 1125 days
62.4
TCGA-CV-5434-01A
0 years, male, black or african american, stage:Stage IVA, dead, 3314 days
61.9
TCGA-CN-6018-01A
0 years, female, white, stage:Stage IVA, dead, 580 days
60.4
TCGA-CV-7261-01A
0 years, male, white, stage:Stage IVA, alive, 1512 days
60.3
TCGA-CV-7103-01A
0 years, male, white, stage:Stage IVA, dead, 1591 days
59.2
TCGA-QK-A6IF-01A
0 years, male, white, stage:'--, alive, 704 days
58.9
TCGA-BA-4078-01A
0 years, male, white, stage:'--, dead, 276 days
58.8
TCGA-P3-A5QE-01A
0 years, male, white, stage:Stage III, alive, 1559 days
57.4
TCGA-T3-A92M-01A
0 years, male, black or african american, stage:Stage IVA, alive, 417 days
57.1
TCGA-HD-7831-01A
0 years, male, white, stage:Stage IVA, alive, 667 days
56.9
TCGA-IQ-A61O-01A
0 years, male, white, stage:Stage IVA, dead, 421 days
55.8
TCGA-CV-6950-01A
0 years, male, white, stage:Stage IVA, dead, 459 days
55.8
TCGA-CR-5250-01A
0 years, male, white, stage:'--, alive, 799 days
54.0
TCGA-CN-4723-01A
0 years, male, white, stage:Stage IVA, alive, 1699 days
53.1
TCGA-QK-A6VB-01A
0 years, male, white, stage:Stage IVA, alive, 641 days
53.1
TCGA-CV-7418-01A
0 years, male, black or african american, stage:Stage IVA, dead, 789 days
52.1
TCGA-HD-A634-01A
0 years, male, white, stage:Stage IVA, dead, 130 days
52.0
TCGA-D6-6827-01A
0 years, female, white, stage:Stage I, alive, 568 days
51.2
TCGA-UF-A7J9-01A
0 years, male, white, stage:Stage IVA, alive, 1358 days
50.3
TCGA-CV-6961-01A
0 years, male, white, stage:Stage II, dead, 76 days
50.1
TCGA-CV-7429-01A
0 years, male, white, stage:Stage IVA, dead, 107 days
50.0
TCGA-DQ-5631-01A
0 years, male, white, stage:'--, dead, 548 days
48.4
TCGA-CR-7382-01A
0 years, male, white, stage:Stage IVA, alive, 796 days
48.3
TCGA-BA-6873-01A
0 years, male, white, stage:Stage IVA, alive, 122 days
47.5
TCGA-CV-7422-01A
0 years, female, white, stage:Stage IVA, dead, 1037 days
46.2
TCGA-BA-5555-01A
0 years, male, black or african american, stage:Stage IVA, alive, 520 days
46.0
TCGA-CN-6989-01A
0 years, male, white, stage:Stage IVA, dead, 980 days
45.2
TCGA-CN-5360-01A
0 years, male, white, stage:Stage IVA, alive, 2169 days
45.2
TCGA-BA-A4IH-01A
0 years, male, white, stage:'--, alive, 622 days
44.9
TCGA-CV-7104-01A
0 years, female, white, stage:Stage IVA, dead, 393 days
44.7
TCGA-CN-6016-01A
0 years, male, white, stage:Stage IVA, alive, 1443 days
44.3
TCGA-UF-A71A-01A
0 years, male, white, stage:Stage IVA, dead, 86 days
44.1
TCGA-T2-A6X0-01A
0 years, male, white, stage:'--, alive, 216 days
44.0
TCGA-IQ-A61I-01A
0 years, male, black or african american, stage:Stage IVA, dead, 2 days
43.9
TCGA-CN-6022-01A
0 years, male, white, stage:Stage IVA, dead, 281 days
43.8
TCGA-CV-7406-01A
0 years, male, white, stage:Stage II, dead, 1748 days
43.8
TCGA-BA-5559-01A
0 years, male, white, stage:'--, dead, 2083 days
43.4
TCGA-CR-7377-01A
0 years, male, white, stage:Stage IVA, dead, 279 days
43.3
TCGA-IQ-A6SG-01A
0 years, female, white, stage:Stage III, alive, 579 days
43.1
TCGA-CV-7421-01A
0 years, male, white, stage:Stage IVA, dead, 2 days
42.9
TCGA-CN-5370-01A
0 years, male, white, stage:Stage III, dead, 259 days
42.7
TCGA-CN-6021-01A
0 years, female, white, stage:'--, dead, 276 days
42.4
TCGA-CN-A6V7-01A
0 years, male, white, stage:Stage IVA, alive, 594 days
42.1
TCGA-CV-7440-01A
0 years, male, white, stage:Stage II, dead, 675 days
41.9
TCGA-CV-7414-01A
0 years, male, white, stage:Stage IVA, dead, 14 days
41.8
TCGA-CR-6470-01A
0 years, male, white, stage:Stage II, alive, 1521 days
41.8
TCGA-CV-7095-01A
0 years, female, stage:Stage II, dead, 572 days
41.2
TCGA-CV-6941-01A
0 years, male, white, stage:Stage III, dead, 342 days
41.0
TCGA-CX-7082-01A
0 years, male, white, stage:Stage IVA, dead, 11 days
40.5
TCGA-CR-6480-01A
0 years, male, white, stage:'--, alive, 362 days
40.4
TCGA-UF-A7JA-01A
0 years, female, white, stage:Stage IVA, alive, 2265 days
40.3
TCGA-HD-7832-01A
0 years, male, white, stage:Stage IVA, alive, 836 days
40.1
TCGA-CQ-5330-01A
0 years, female, white, stage:Stage IVA, alive, 1897 days
40.0
TCGA-CR-7371-01A
0 years, female, white, stage:Stage III, dead, 94 days
39.7
TCGA-CR-6474-01A
0 years, male, white, stage:Stage IVA, dead, 564 days
39.6
TCGA-CV-6934-01A
0 years, female, white, stage:Stage IVA, dead, 65 days
39.5
TCGA-CV-7424-01A
0 years, male, asian, stage:Stage IVA, dead, 453 days
39.2
TCGA-UP-A6WW-01A
0 years, male, white, stage:'--, alive, 518 days
39.1
TCGA-CN-6992-01A
0 years, male, white, stage:Stage IVA, alive, 1066 days
38.9
TCGA-CQ-A4CG-01A
0 years, female, white, stage:Stage III, dead, 430 days
38.7
TCGA-BB-A5HY-01A
0 years, male, white, stage:Stage IVA, dead, 321 days
38.5
TCGA-CN-A499-01A
0 years, female, white, stage:Stage II, alive, 717 days
38.5
TCGA-CQ-6224-01A
0 years, male, white, stage:Stage IVA, alive, 1721 days
38.4
TCGA-CR-7389-01A
0 years, male, black or african american, stage:'--, alive, 392 days
37.9
TCGA-BB-A5HU-01A
0 years, male, white, stage:Stage IVA, alive, 782 days
37.8
TCGA-CN-6023-01A
0 years, male, white, stage:Stage IVA, alive, 1584 days
37.7
TCGA-BA-A8YP-01A
0 years, male, black or african american, stage:Stage IVB, alive, 499 days
37.6
TCGA-CR-6487-01A
0 years, male, white, stage:Stage I, alive, 234 days
37.4
TCGA-CN-5361-01A
0 years, male, white, stage:Stage IVA, dead, 2120 days
37.3
TCGA-CV-7415-01A
0 years, male, white, stage:Stage IVA, dead, 695 days
37.1
TCGA-CV-6933-01A
0 years, male, white, stage:Stage III, dead, 2741 days
37.0
TCGA-CV-A45U-01A
0 years, male, white, stage:Stage IVA, dead, 1079 days
36.9
TCGA-CN-6011-01A
0 years, male, white, stage:Stage IVA, alive, 933 days
36.7
TCGA-CV-7435-01A
0 years, female, white, stage:Stage IVA, dead, 4680 days
36.5
TCGA-HD-7754-01A
0 years, male, white, stage:Stage IVA, alive, 783 days
36.2
TCGA-CR-5243-01A
0 years, male, white, stage:'--, alive, 2562 days
36.1
TCGA-CN-5363-01A
0 years, male, black or african american, stage:Stage IVB, dead, 253 days
35.7
TCGA-CV-5444-01A
0 years, male, black or african american, stage:Stage IVA, alive, 2437 days
35.7
TCGA-TN-A7HI-01A
0 years, male, white, stage:Stage IVA, alive, 412 days
35.4
TCGA-CN-A6V6-01A
0 years, male, white, stage:Stage IVA, alive, 635 days
35.4
TCGA-CN-6024-01A
0 years, male, white, stage:Stage IVA, dead, 337 days
35.1
TCGA-UF-A7JD-01A
0 years, male, stage:Stage IVA, dead, 739 days
35.0
TCGA-CN-4735-01A
0 years, male, white, stage:Stage IVA, alive, 1737 days
34.9
TCGA-CN-5366-01A
0 years, male, white, stage:Stage IVA, dead, 360 days
34.3
TCGA-BB-4228-01A
0 years, male, white, stage:Stage III, alive, 559 days
34.1
TCGA-CV-6960-01A
0 years, male, black or african american, stage:Stage III, dead, 862 days
34.1
TCGA-CV-6939-01A
0 years, male, white, stage:Stage IVA, dead, 666 days
34.1
TCGA-CQ-7072-01A
0 years, male, white, stage:Stage II, alive, 2359 days
34.0
TCGA-P3-A6T8-01A
0 years, male, white, stage:Stage IVA, alive, 400 days
34.0
TCGA-CV-7090-01A
0 years, male, white, stage:Stage II, alive, 5252 days
33.8
TCGA-CV-5440-01A
0 years, male, white, stage:Stage IVA, alive, 3270 days
33.7
TCGA-CR-6488-01A
0 years, female, white, stage:Stage II, alive, 379 days
33.3
TCGA-CN-A6UY-01A
0 years, male, white, stage:Stage IVA, alive, 713 days
33.2
TCGA-CV-7433-01A
0 years, male, white, stage:Stage IVA, dead, 601 days
33.0
TCGA-CV-5436-01A
0 years, male, stage:Stage IVA, dead, 584 days
32.9
TCGA-CV-7242-01A
0 years, female, white, stage:Stage II, alive, 1095 days
32.8
TCGA-CR-6477-01A
0 years, female, white, stage:'--, alive, 514 days
32.7
TCGA-CN-5355-01A
0 years, male, black or african american, stage:Stage IVA, alive, 1278 days
32.6
TCGA-D6-6824-01A
0 years, male, white, stage:Stage IVA, alive, 77 days
32.2
TCGA-CN-6019-01A
0 years, male, white, stage:Stage IVA, alive, 1038 days
32.2
TCGA-CR-7402-01A
0 years, male, white, stage:'--, alive, 911 days
32.0
TCGA-CN-A497-01A
0 years, male, stage:Stage III, alive, 1065 days
31.9
TCGA-CN-5367-01A
0 years, female, white, stage:Stage IVA, dead, 352 days
31.9
TCGA-CV-6962-01A
0 years, male, white, stage:Stage IVA, dead, 126 days
31.6
TCGA-CV-7097-01A
0 years, male, white, stage:Stage II, dead, 385 days
31.6
TCGA-CQ-7065-01A
0 years, male, asian, stage:Stage II, alive, 1628 days
31.6
TCGA-RS-A6TO-01A
0 years, female, white, stage:Stage IVA, dead, 387 days
31.4
TCGA-CR-7372-01A
0 years, male, white, stage:Stage I, alive, 759 days
31.1
TCGA-CR-7393-01A
0 years, male, white, stage:Stage III, alive, 993 days
31.1
TCGA-CR-7368-01A
0 years, male, white, stage:Stage IVA, alive, 1245 days
31.1
TCGA-CN-5359-01A
0 years, male, white, stage:Stage IVA, dead, 377 days
31.1
TCGA-CV-5443-01A
0 years, male, black or african american, stage:Stage III, alive, 2784 days
31.0
TCGA-CV-6433-01A
0 years, male, white, stage:Stage II, alive, 641 days
31.0
TCGA-CN-6012-01A
0 years, male, white, stage:Stage IVA, alive, 1460 days
30.9
TCGA-CN-4728-01A
0 years, male, white, stage:Stage IVA, alive, 1724 days
30.8
TCGA-CQ-5323-01A
0 years, male, white, stage:Stage I, alive, 1466 days
30.7
TCGA-CR-7376-01A
0 years, male, white, stage:Stage III, alive, 972 days
30.7
TCGA-CR-6467-01A
0 years, male, white, stage:Stage III, alive, 1777 days
30.5
TCGA-QK-A6IG-01A
0 years, male, white, stage:Stage III, dead, 222 days
30.4
TCGA-CQ-5324-01A
0 years, male, white, stage:Stage III, alive, 1593 days
30.4
TCGA-CV-7238-01A
0 years, female, white, stage:Stage II, alive, 2727 days
30.3
TCGA-CN-A49C-01A
0 years, male, white, stage:'--, alive, 645 days
30.3
TCGA-CV-7434-01A
0 years, male, white, stage:Stage IVA, dead, 218 days
30.2
TCGA-DQ-7592-01A
0 years, male, american indian or alaska native, stage:'--, alive, 1143 days
30.1
TCGA-CQ-A4C7-01A
0 years, male, white, stage:Stage III, dead, 353 days
29.9
TCGA-UF-A7JK-01A
0 years, male, stage:Stage IVA, dead, 424 days
29.8
TCGA-CR-7385-01A
0 years, male, white, stage:'--, alive, 997 days
29.7
TCGA-CR-6482-01A
0 years, male, black or african american, stage:'--, alive, 345 days
29.4
TCGA-CV-A464-01A
0 years, male, white, stage:Stage III, alive, 1722 days
29.4
TCGA-CQ-A4CI-01A
0 years, male, white, stage:Stage III, alive, 950 days
29.4
TCGA-CR-7397-01A
0 years, male, white, stage:Stage IVA, alive, 754 days
29.4
TCGA-HD-A6HZ-01A
0 years, female, white, stage:Stage III, alive, 111 days
29.1
TCGA-CV-7178-01A
0 years, female, white, stage:Stage IVA, dead, 2166 days
29.1
TCGA-CR-6478-01A
0 years, female, white, stage:'--, dead, 183 days
29.0
TCGA-CR-7379-01A
0 years, female, white, stage:Stage IVA, alive, 1036 days
28.9
TCGA-CR-7404-01A
0 years, male, white, stage:'--, alive, 1472 days
28.8
TCGA-CN-6017-01A
0 years, male, white, stage:Stage IVA, dead, 853 days
28.7
TCGA-CN-A63U-01A
0 years, male, white, stage:Stage IVA, alive, 964 days
28.7
TCGA-CQ-6228-01A
0 years, female, white, stage:Stage IVA, dead, 456 days
28.7
TCGA-QK-A8Z8-01A
0 years, female, black or african american, stage:Stage IVC, dead, 171 days
28.6
TCGA-CR-7369-01A
0 years, male, white, stage:Stage IVA, dead, 1090 days
28.5
TCGA-BA-A6DE-01A
0 years, female, white, stage:Stage II, alive, 440 days
28.4
TCGA-F7-8489-01A
0 years, male, white, stage:Stage II, alive, 658 days
28.2
TCGA-BB-A6UM-01A
0 years, male, white, stage:Stage III, alive, 393 days
28.1
TCGA-BB-8596-01A
0 years, female, white, stage:Stage IVA, alive, 2161 days
27.9
TCGA-CV-5971-01A
0 years, male, white, stage:Stage IVA, alive, 701 days
27.9
TCGA-CR-7392-01A
0 years, female, white, stage:Stage IVA, alive, 1425 days
27.8
TCGA-QK-A8ZA-01A
0 years, male, black or african american, stage:'--, dead, 371 days
27.7
TCGA-UF-A719-01A
0 years, male, stage:Stage II, alive, 1663 days
27.6
TCGA-RS-A6TP-01A
0 years, male, white, stage:Stage II, alive, 516 days
27.6
TCGA-CV-5966-01A
0 years, female, white, stage:Stage IVA, dead, 545 days
27.6
TCGA-CR-7398-01A
0 years, female, white, stage:Stage II, alive, 156 days
27.5
TCGA-IQ-A61J-01A
0 years, male, white, stage:Stage IVA, alive, 1021 days
27.3
TCGA-BA-A4IF-01A
0 years, male, white, stage:'--, alive, 895 days
27.3
TCGA-D6-6517-01A
0 years, male, white, stage:Stage III, alive, 292 days
27.2
TCGA-CV-A45W-01A
0 years, male, white, stage:Stage II, dead, 1398 days
27.2
TCGA-CN-4741-01A
0 years, male, white, stage:Stage IVA, alive, 2239 days
27.2
TCGA-CN-4736-01A
0 years, female, white, stage:'--, dead, 395 days
27.1
TCGA-CV-5431-01A
0 years, male, white, stage:Stage IVA, dead, 522 days
27.0
TCGA-HD-8314-01A
0 years, male, white, stage:Stage III, alive, 670 days
27.0
TCGA-CR-5249-01A
0 years, female, white, stage:Stage II, alive, 1152 days
26.9
TCGA-BB-4223-01A
0 years, male, white, stage:Stage IVA, alive, 3221 days
26.8
TCGA-CV-7091-01A
0 years, male, white, stage:Stage I, alive, 3381 days
26.7
TCGA-CQ-6219-01A
0 years, female, white, stage:Stage IVA, dead, 479 days
26.5
TCGA-IQ-7631-01A
0 years, female, white, stage:Stage II, alive, 1172 days
26.4
TCGA-CQ-7069-01A
0 years, female, white, stage:Stage II, alive, 1274 days
26.4
TCGA-CR-7386-01A
0 years, male, white, stage:Stage IVA, alive, 1430 days
26.3
TCGA-DQ-5624-01A
0 years, female, white, stage:'--, alive, 1778 days
26.3
TCGA-UF-A7JV-01A
0 years, female, white, stage:Stage IVA, dead, 90 days
26.3
TCGA-CR-7373-01A
0 years, male, white, stage:Stage IVA, alive, 889 days
26.2
TCGA-BA-4076-01A
0 years, male, white, stage:'--, dead, 415 days
26.2
TCGA-CQ-5334-01A
0 years, male, white, stage:Stage IVA, dead, 129 days
26.2
TCGA-CV-6937-01A
0 years, male, white, stage:Stage II, dead, 624 days
26.1
TCGA-CV-A461-01A
0 years, male, white, stage:'--, dead, 2064 days
26.1
TCGA-CV-6943-01A
0 years, male, white, stage:Stage III, dead, 602 days
26.1
TCGA-CV-7177-01A
0 years, female, white, stage:Stage II, dead, 663 days
26.0
TCGA-MZ-A5BI-01A
0 years, male, white, stage:'--, dead, 217 days
26.0
TCGA-CV-7446-01A
0 years, male, white, stage:Stage IVA, dead, 1093 days
25.9
TCGA-D6-6515-01A
0 years, female, white, stage:Stage II, dead, 403 days
25.9
TCGA-CV-A6JD-01A
0 years, female, white, stage:'--, dead, 182 days
25.7
TCGA-CN-5364-01A
0 years, male, white, stage:Stage IVA, dead, 493 days
25.6
TCGA-P3-A6T3-01A
0 years, male, white, stage:Stage IVA, dead, 577 days
25.6
TCGA-BA-6871-01A
0 years, male, white, stage:'--, dead, 108 days
25.6
TCGA-UF-A7JJ-01A
0 years, male, stage:Stage IVA, alive, 549 days
25.6
TCGA-CV-7263-01A
0 years, male, black or african american, stage:Stage II, dead, 560 days
25.5
TCGA-CR-7390-01A
0 years, male, white, stage:Stage IVA, alive, 1508 days
25.5
TCGA-HD-7753-01A
0 years, male, black or african american, stage:Stage I, alive, 866 days
25.4
TCGA-CR-7388-01A
0 years, female, white, stage:'--, dead, 823 days
25.4
TCGA-CV-7438-01A
0 years, female, white, stage:Stage I, dead, 194 days
25.3
TCGA-D6-A74Q-01A
0 years, male, white, stage:Stage IVA, alive, 710 days
25.3
TCGA-WA-A7GZ-01A
0 years, male, white, stage:'--, dead, 625 days
25.3
TCGA-CV-6003-01A
0 years, female, white, stage:Stage III, alive, 1665 days
25.2
TCGA-BA-A4IG-01A
0 years, male, white, stage:'--, alive, 855 days
25.0
TCGA-CR-7399-01A
0 years, female, white, stage:Stage IVA, alive, 181 days
25.0
TCGA-UF-A718-01A
0 years, male, white, stage:Stage IVA, alive, 1971 days
24.8
TCGA-CR-6481-01A
0 years, male, white, stage:'--, alive, 311 days
24.7
TCGA-F7-8298-01A
0 years, male, white, stage:Stage I, alive, 995 days
24.6
TCGA-CV-7101-01A
0 years, male, white, stage:Stage II, dead, 160 days
24.6
TCGA-QK-A8Z7-01A
0 years, male, black or african american, stage:Stage IVA, alive, 392 days
24.1
TCGA-CV-5435-01A
0 years, male, white, stage:Stage IVA, dead, 2319 days
23.7
TCGA-P3-A5Q6-01A
0 years, male, white, stage:Stage IVA, dead, 480 days
23.7
TCGA-CV-A45Y-01A
0 years, male, american indian or alaska native, stage:Stage IVA, dead, 2703 days
23.6
TCGA-CV-6441-01A
0 years, male, white, stage:Stage III, dead, 292 days
23.6
TCGA-CR-7365-01A
0 years, male, white, stage:Stage IVA, alive, 1191 days
23.5
TCGA-CV-7437-01A
0 years, male, stage:Stage II, dead, 506 days
23.4
TCGA-CN-4731-01A
0 years, female, white, stage:Stage IVA, dead, 998 days
23.4
TCGA-CV-6948-01A
0 years, female, white, stage:Stage IVB, dead, 1289 days
23.4
TCGA-D6-6825-01A
0 years, male, white, stage:Stage I, alive, 491 days
23.3
TCGA-CR-7383-01A
0 years, female, white, stage:Stage I, dead, 521 days
23.2
TCGA-CQ-7068-01A
0 years, female, white, stage:Stage II, alive, 1309 days
23.2
TCGA-4P-AA8J-01A
0 years, male, black or african american, stage:Stage IVA, alive, 102 days
23.1
TCGA-D6-8569-01A
0 years, male, white, stage:Stage II, alive, 770 days
23.1
TCGA-CV-7416-01A
0 years, female, white, stage:Stage IVA, dead, 763 days
23.0
TCGA-CQ-A4C6-01A
0 years, male, asian, stage:Stage II, alive, 1353 days
22.8
TCGA-CV-5979-01A
0 years, male, white, stage:Stage IVA, alive, 1315 days
22.3
TCGA-D6-A4ZB-01A
0 years, male, white, stage:Stage III, alive, 376 days
22.3
TCGA-CR-5248-01A
0 years, male, white, stage:'--, alive, 1663 days
22.2
TCGA-CV-7248-01A
0 years, female, black or african american, stage:Stage IVA, dead, 521 days
22.1
TCGA-CQ-6225-01A
0 years, male, white, stage:Stage III, dead, 403 days
21.9
TCGA-CR-7364-01A
0 years, male, white, stage:Stage III, alive, 1435 days
21.9
TCGA-CV-7407-01A
0 years, female, white, stage:Stage II, dead, 1081 days
21.9
TCGA-BA-5556-01A
0 years, female, white, stage:Stage II, alive, 725 days
21.9
TCGA-CV-7235-01A
0 years, male, white, stage:Stage II, alive, 2347 days
21.8
TCGA-CV-A460-01A
0 years, male, white, stage:'--, dead, 1838 days
21.8
TCGA-CV-6951-01A
0 years, male, white, stage:Stage IVA, dead, 915 days
21.7
TCGA-CR-7380-01A
0 years, male, white, stage:Stage IVB, dead, 606 days
21.7
TCGA-KU-A66S-01A
0 years, female, white, stage:Stage III, dead, 406 days
21.7
TCGA-CN-4740-01A
0 years, female, white, stage:Stage IVA, dead, 839 days
21.6
TCGA-CQ-5329-01A
0 years, female, white, stage:Stage II, alive, 2143 days
21.5
TCGA-CN-A49A-01A
0 years, male, white, stage:Stage IVB, dead, 526 days
21.5
TCGA-CN-4739-01A
0 years, male, white, stage:Stage IVA, dead, 1394 days
21.4
TCGA-CV-6942-01A
0 years, female, white, stage:Stage II, alive, 4282 days
21.4
TCGA-CV-5441-01A
0 years, male, white, stage:Stage IVA, alive, 2886 days
21.3
TCGA-WA-A7H4-01A
0 years, male, white, stage:Stage II, alive, 443 days
21.3
TCGA-QK-A8ZB-01A
0 years, male, black or african american, stage:Stage IVA, alive, 542 days
21.2
TCGA-HL-7533-01A
0 years, male, white, stage:'--, alive, 1057 days
21.1
TCGA-KU-A6H7-01A
0 years, female, white, stage:Stage IVA, alive, 586 days
21.1
TCGA-CN-4737-01A
0 years, male, white, stage:Stage IVA, alive, 625 days
21.1
TCGA-CV-7410-01A
0 years, male, white, stage:Stage III, dead, 6417 days
21.0
TCGA-CN-5356-01A
0 years, male, white, stage:Stage III, alive, 1409 days
21.0
TCGA-BB-8601-01A
0 years, male, black or african american, stage:Stage III, alive, 624 days
20.9
TCGA-CQ-A4CD-01A
0 years, male, white, stage:Stage IVA, alive, 1022 days
20.8
TCGA-CV-7247-01A
0 years, male, white, stage:Stage III, dead, 577 days
20.8
TCGA-CN-6996-01A
0 years, female, white, stage:Stage IVA, dead, 530 days
20.7
TCGA-CV-7245-01A
0 years, male, white, stage:Stage IVA, alive, 797 days
20.5
TCGA-CV-7253-01A
0 years, male, black or african american, stage:Stage IVA, dead, 361 days
20.4
TCGA-P3-A5QA-01A
0 years, male, stage:Stage I, alive, 2182 days
20.4
TCGA-CV-5432-01A
0 years, male, white, stage:Stage III, alive, 3930 days
20.3
TCGA-CV-A6JZ-01A
0 years, male, white, stage:Stage II, alive, 714 days
20.3
TCGA-CR-6472-01A
0 years, male, white, stage:'--, alive, 1050 days
20.3
TCGA-MZ-A6I9-01A
0 years, male, white, stage:'--, dead, 489 days
20.1
TCGA-F7-7848-01A
0 years, male, white, stage:Stage IVA, alive, 1131 days
20.0
TCGA-F7-A61W-01A
0 years, male, asian, stage:Stage IVA, alive, 14 days
20.0
TCGA-HD-8635-01A
0 years, female, white, stage:Stage III, alive, 695 days
19.9
TCGA-BA-6869-01A
0 years, male, white, stage:Stage III, alive, 644 days
19.8
TCGA-BB-4217-01A
0 years, male, black or african american, stage:Stage IVA, alive, 187 days
19.8
TCGA-BA-A6DG-01A
0 years, male, white, stage:'--, dead, 69 days
19.8
TCGA-CN-6010-01A
0 years, male, white, stage:Stage IVA, alive, 1523 days
19.8
TCGA-CX-7219-01A
0 years, male, black or african american, stage:Stage IVA, alive, 1045 days
19.7
TCGA-CV-7236-01A
0 years, female, white, stage:Stage IVA, dead, 144 days
19.6
TCGA-BA-6872-01A
0 years, male, white, stage:'--, dead, 384 days
19.6
TCGA-CV-7413-01A
0 years, female, white, stage:Stage II, dead, 294 days
19.6
TCGA-CN-4733-01A
0 years, male, white, stage:Stage III, alive, 1586 days
19.4
TCGA-BA-5152-01A
0 years, male, white, stage:Stage IVA, alive, 1288 days
19.4
TCGA-QK-A64Z-01A
0 years, female, white, stage:Stage IVA, dead, 641 days
19.4
TCGA-CV-5978-01A
0 years, female, black or african american, stage:Stage IVB, dead, 215 days
19.4
TCGA-CN-5373-01A
0 years, female, white, stage:Stage I, alive, 1584 days
19.3
TCGA-CV-7430-01A
0 years, male, white, stage:Stage IVA, dead, 495 days
19.3
TCGA-DQ-5629-01A
0 years, male, white, stage:'--, dead, 941 days
19.3
TCGA-CR-6471-01A
0 years, male, white, stage:Stage IVA, dead, 1202 days
19.1
TCGA-F7-A50I-01A
0 years, male, white, stage:Stage IVA, alive, 92 days
19.1
TCGA-CN-5374-01A
0 years, female, white, stage:Stage IVA, dead, 1732 days
19.0
TCGA-CV-7255-01A
0 years, female, white, stage:Stage IVA, dead, 64 days
18.9
TCGA-CV-7254-01A
0 years, male, white, stage:Stage II, dead, 1459 days
18.9
TCGA-P3-A6SX-01A
0 years, male, white, stage:Stage III, dead, 1430 days
18.8
TCGA-CQ-5333-01A
0 years, male, white, stage:Stage II, dead, 341 days
18.8
TCGA-CV-A45Z-01A
0 years, male, white, stage:'--, dead, 1466 days
18.7
TCGA-D6-8568-01A
0 years, male, white, stage:Stage II, alive, 759 days
18.6
TCGA-QK-AA3J-01A
0 years, male, black or african american, stage:Stage I, alive, 466 days
18.5
TCGA-P3-A6T4-01A
0 years, male, white, stage:Stage IVA, dead, 62 days
18.5
TCGA-CV-6954-01A
0 years, male, black or african american, stage:Stage IVA, dead, 2002 days
18.4
TCGA-CV-6959-01A
0 years, male, white, stage:Stage III, dead, 256 days
18.4
TCGA-BA-5557-01A
0 years, female, stage:Stage III, alive, 623 days
18.2
TCGA-CX-7085-01A
0 years, female, white, stage:Stage I, alive, 321 days
18.0
TCGA-HD-8224-01A
0 years, male, white, stage:Stage IVA, dead, 446 days
18.0
TCGA-UF-A7JO-01A
0 years, female, white, stage:Stage IVA, dead, 631 days
17.9
TCGA-D6-A6EO-01A
0 years, male, white, stage:Stage IVA, alive, 759 days
17.6
TCGA-BB-4227-01A
0 years, male, white, stage:Stage IVA, alive, 134 days
17.6
TCGA-P3-A5QF-01A
0 years, male, white, stage:Stage IVA, dead, 330 days
17.5
TCGA-IQ-A61H-01A
0 years, male, white, stage:Stage II, alive, 1138 days
17.4
TCGA-CN-6995-01A
0 years, male, white, stage:Stage IVA, dead, 112 days
17.3
TCGA-HD-A4C1-01A
0 years, female, black or african american, stage:Stage IVA, alive, 11 days
17.3
TCGA-CN-6988-01A
0 years, male, white, stage:Stage IVA, alive, 318 days
17.0
TCGA-CN-A63V-01A
0 years, male, white, stage:Stage IVA, alive, 679 days
17.0
TCGA-D6-6826-01A
0 years, female, white, stage:Stage IVA, dead, 348 days
16.9
TCGA-CR-7391-01A
0 years, female, white, stage:Stage I, alive, 913 days
16.9
TCGA-CQ-A4CB-01A
0 years, male, stage:Stage III, alive, 893 days
16.9
TCGA-CQ-6227-01A
0 years, male, white, stage:Stage IVA, dead, 129 days
16.8
TCGA-IQ-7630-01A
0 years, male, white, stage:Stage II, alive, 485 days
16.8
TCGA-UF-A71B-01A
0 years, male, white, stage:Stage IVA, alive, 1506 days
16.8
TCGA-KU-A6H8-01A
0 years, male, white, stage:Stage IVA, dead, 327 days
16.8
TCGA-CN-6013-01A
0 years, male, white, stage:Stage IVA, dead, 727 days
16.7
TCGA-P3-A6T2-01A
0 years, male, white, stage:Stage IVA, alive, 2298 days
16.7
TCGA-CN-5358-01A
0 years, male, white, stage:Stage II, dead, 261 days
16.6
TCGA-BA-A6DI-01A
0 years, male, black or african american, stage:'--, dead, 336 days
16.6
TCGA-CV-6940-01A
0 years, female, white, stage:Stage III, dead, 804 days
16.6
TCGA-CR-7367-01A
0 years, male, white, stage:Stage IVA, alive, 1440 days
16.6
TCGA-D6-6823-01A
0 years, male, white, stage:Stage II, alive, 701 days
16.5
TCGA-CN-4738-01A
0 years, male, white, stage:Stage IVA, dead, 436 days
16.5
TCGA-CR-7401-01A
0 years, male, white, stage:Stage I, alive, 1077 days
16.5
TCGA-D6-A4Z9-01A
0 years, male, white, stage:Stage IVA, alive, 539 days
16.5
TCGA-CV-7250-01A
0 years, male, white, stage:Stage IVA, dead, 2900 days
16.5
TCGA-CN-4742-01A
0 years, female, white, stage:Stage IVA, dead, 397 days
16.4
TCGA-CN-4729-01A
0 years, male, white, stage:Stage III, alive, 392 days
16.3
TCGA-CN-4730-01A
0 years, male, white, stage:Stage IVA, alive, 817 days
16.3
TCGA-CV-6945-01A
0 years, male, white, stage:Stage IVA, dead, 366 days
16.3
TCGA-F7-A624-01A
0 years, male, white, stage:Stage II, alive, 378 days
16.3
TCGA-CV-5976-01A
0 years, male, white, stage:Stage IVA, alive, 1478 days
16.1
TCGA-C9-A47Z-01A
0 years, female, asian, stage:Stage III, dead, 191 days
16.0
TCGA-CR-6492-01A
0 years, male, white, stage:Stage III, alive, 479 days
16.0
TCGA-BA-5558-01A
0 years, male, white, stage:'--, alive, 1995 days
16.0
TCGA-CN-A63W-01A
0 years, female, white, stage:Stage IVA, dead, 377 days
15.9
TCGA-CQ-7063-01A
0 years, female, white, stage:Stage I, alive, 2133 days
15.9
TCGA-CV-5977-01A
0 years, male, white, stage:Stage IVA, alive, 1840 days
15.9
TCGA-CV-7102-01A
0 years, female, white, stage:Stage IVA, dead, 56 days
15.8
TCGA-CV-6935-01A
0 years, male, white, stage:Stage IVA, dead, 295 days
15.8
TCGA-UF-A7JT-01A
0 years, female, white, stage:Stage IVA, dead, 993 days
15.8
TCGA-BA-5151-01A
0 years, male, white, stage:Stage IVA, alive, 722 days
15.7
TCGA-CV-7252-01A
0 years, female, black or african american, stage:Stage IVA, dead, 151 days
15.7
TCGA-CN-6020-01A
0 years, male, black or african american, stage:Stage III, dead, 205 days
15.6
TCGA-CQ-6222-01A
0 years, male, white, stage:Stage IVA, alive, 2016 days
15.5
TCGA-CV-A45T-01A
0 years, female, white, stage:'--, dead, 4856 days
15.4
TCGA-CV-A468-01A
0 years, male, stage:Stage IVA, dead, 464 days
15.4
TCGA-TN-A7HL-01A
0 years, male, white, stage:Stage IVA, alive, 619 days
15.4
TCGA-CV-7099-01A
0 years, female, white, stage:Stage II, dead, 243 days
15.2
TCGA-CQ-5325-01A
0 years, male, white, stage:Stage I, dead, 654 days
15.1
TCGA-CR-7394-01A
0 years, male, white, stage:Stage IVA, alive, 1346 days
15.0
TCGA-BA-A6DJ-01A
0 years, male, asian, stage:Stage IVA, dead, 407 days
15.0
TCGA-UF-A7JC-01A
0 years, male, white, stage:Stage IVA, dead, 546 days
14.9
TCGA-T2-A6WX-01A
0 years, female, white, stage:'--, dead, 209 days
14.9
TCGA-IQ-A61E-01A
0 years, female, white, stage:Stage III, alive, 1147 days
14.9
TCGA-CQ-5326-01A
0 years, male, white, stage:Stage IVA, dead, 89 days
14.8
TCGA-H7-8502-01A
0 years, male, white, stage:Stage IVA, alive, 458 days
14.8
TCGA-CV-6952-01A
0 years, female, white, stage:Stage IVA, dead, 185 days
14.8
TCGA-CR-5247-01A
0 years, male, black or african american, stage:'--, alive, 358 days
14.7
TCGA-P3-A6T0-01A
0 years, female, white, stage:Stage IVA, alive, 578 days
14.7
TCGA-CQ-6220-01A
0 years, male, white, stage:Stage III, dead, 985 days
14.6
TCGA-QK-A652-01A
0 years, male, white, stage:Stage III, alive, 645 days
14.5
TCGA-UF-A71E-01A
0 years, male, white, stage:Stage IVA, dead, 1504 days
14.4
TCGA-CQ-5332-01A
0 years, male, white, stage:Stage III, dead, 317 days
14.4
TCGA-CV-6936-01A
0 years, male, white, stage:Stage IVA, dead, 166 days
14.4
TCGA-DQ-5625-01A
0 years, female, white, stage:'--, dead, 1133 days
14.4
TCGA-C9-A480-01A
0 years, female, asian, stage:Stage III, alive, 386 days
14.4
TCGA-CV-5970-01A
0 years, male, white, stage:Stage IVA, dead, 406 days
14.3
TCGA-CV-A45R-01A
0 years, male, white, stage:Stage III, alive, 5480 days
14.3
TCGA-CQ-5331-01A
0 years, female, white, stage:'--, alive, 1399 days
14.3
TCGA-F7-A620-01A
0 years, male, white, stage:Stage III, alive, 543 days
14.2
TCGA-CV-7089-01A
0 years, male, white, stage:Stage IVA, dead, 1972 days
14.1
TCGA-T3-A92N-01A
0 years, male, black or african american, stage:Stage IVA, dead, 95 days
13.9
TCGA-CN-5369-01A
0 years, female, white, stage:Stage IVA, dead, 1 days
13.9
TCGA-CN-A6V3-01A
0 years, male, white, stage:Stage IVA, alive, 742 days
13.9
TCGA-CV-7428-01A
0 years, male, white, stage:Stage IVA, dead, 1671 days
13.8
TCGA-H7-8501-01A
0 years, male, white, stage:Stage IVA, alive, 461 days
13.7
TCGA-H7-A76A-01A
0 years, male, white, stage:'--, alive, 637 days
13.4
TCGA-F7-A61S-01A
0 years, male, white, stage:Stage III, alive, 576 days
13.4
TCGA-CQ-A4CH-01A
0 years, male, asian, stage:Stage II, dead, 379 days
13.3
TCGA-BA-A4II-01A
0 years, male, white, stage:Stage II, alive, 918 days
13.2
TCGA-T2-A6WZ-01A
0 years, male, white, stage:'--, dead, 484 days
13.0
TCGA-CV-5439-01A
0 years, male, white, stage:Stage IVA, dead, 546 days
12.9
TCGA-CN-A498-01A
0 years, female, white, stage:Stage III, dead, 773 days
12.9
TCGA-CV-7427-01A
0 years, female, white, stage:Stage II, dead, 4760 days
12.9
TCGA-CR-6491-01A
0 years, male, black or african american, stage:Stage IVA, alive, 693 days
12.9
TCGA-CR-6484-01A
0 years, female, asian, stage:Stage IVA, alive, 354 days
12.8
TCGA-UF-A7JH-01A
0 years, male, black or african american, stage:Stage IVA, alive, 896 days
12.6
TCGA-BB-A6UO-01A
0 years, female, white, stage:Stage IVA, dead, 268 days
12.5
TCGA-CN-A63T-01A
0 years, male, white, stage:Stage IVA, alive, 225 days
12.5
TCGA-UF-A7JF-01A
0 years, male, white, stage:Stage IVA, alive, 1686 days
12.4
TCGA-CN-4734-01A
0 years, male, white, stage:Stage II, alive, 1690 days
12.4
TCGA-DQ-5630-01A
0 years, male, white, stage:'--, alive, 1030 days
12.3
TCGA-BA-A6DD-01A
0 years, male, black or african american, stage:Stage IVA, dead, 173 days
12.3
TCGA-BA-A6DB-01A
0 years, female, white, stage:Stage I, alive, 216 days
12.3
TCGA-P3-A6T6-01A
0 years, male, white, stage:Stage IVA, dead, 395 days
12.0
TCGA-MT-A51X-01A
0 years, male, white, stage:Stage IVA, alive, 242 days
11.9
TCGA-F7-A623-01A
0 years, male, white, stage:Stage IVA, alive, 616 days
11.9
TCGA-CR-7395-01A
0 years, female, white, stage:Stage II, alive, 930 days
11.9
TCGA-CX-A4AQ-01A
0 years, male, white, stage:Stage IVA, alive, 1555 days
11.8
TCGA-D6-6516-01A
0 years, male, white, stage:Stage I, alive, 773 days
11.8
TCGA-HD-7229-01A
0 years, male, white, stage:Stage IVA, alive, 1027 days
11.7
TCGA-CV-A6K2-01A
0 years, male, white, stage:Stage IVA, dead, 317 days
11.7
TCGA-CQ-5327-01A
0 years, female, asian, stage:Stage IVA, alive, 1660 days
11.6
TCGA-IQ-A6SH-01A
0 years, male, black or african american, stage:Stage III, alive, 471 days
11.6
TCGA-BA-4074-01A
0 years, male, white, stage:Stage IVA, dead, 462 days
11.3
TCGA-CV-A6JE-01A
0 years, male, white, stage:'--, alive, 1075 days
11.1
TCGA-CN-A642-01A
0 years, male, white, stage:Stage IVB, dead, 82 days
11.1
TCGA-CQ-A4C9-01A
0 years, male, stage:Stage III, alive, 707 days
10.9
TCGA-CN-A49B-01A
0 years, male, white, stage:Stage III, alive, 904 days
10.8
TCGA-CX-7086-01A
0 years, male, black or african american, stage:Stage III, alive, 573 days
10.6
TCGA-P3-A6SW-01A
0 years, male, white, stage:Stage IVB, alive, 1120 days
10.5
TCGA-CR-6493-01A
0 years, male, black or african american, stage:Stage IVA, dead, 282 days
10.4
TCGA-CQ-6229-01A
0 years, male, white, stage:Stage II, alive, 1179 days
10.4
TCGA-CV-7425-01A
0 years, female, white, stage:Stage III, dead, 1718 days
10.4
TCGA-MT-A67F-01A
0 years, female, white, stage:Stage IVA, alive, 384 days
10.2
TCGA-BA-A6D8-01A
0 years, male, black or african american, stage:Stage IVA, alive, 850 days
10.1
TCGA-HD-A633-01A
0 years, male, white, stage:Stage IVA, alive, 421 days
10.0
TCGA-F7-A61V-01A
0 years, male, white, stage:Stage II, alive, 759 days
10.0
TCGA-CQ-6218-01A
0 years, female, white, stage:Stage IVA, alive, 1253 days
9.9
TCGA-KU-A66T-01A
0 years, female, white, stage:Stage IVA, alive, 552 days
9.8
TCGA-P3-A6T7-01A
0 years, male, white, stage:Stage IVA, dead, 487 days
9.8
TCGA-UF-A71D-01A
0 years, female, white, stage:Stage IVA, alive, 1461 days
9.7
TCGA-BA-A6DL-01A
0 years, male, white, stage:'--, alive, 623 days
9.7
TCGA-D6-A6EQ-01A
0 years, male, white, stage:Stage IVA, alive, 368 days
9.5
TCGA-MT-A67D-01A
0 years, male, white, stage:Stage II, alive, 56 days
9.4
TCGA-BA-4075-01A
0 years, male, black or african american, stage:Stage III, dead, 283 days
9.3
TCGA-TN-A7HJ-01A
0 years, male, white, stage:Stage IVA, alive, 403 days
9.3
TCGA-CV-A6JM-01A
0 years, male, white, stage:'--, dead, 194 days
9.2
TCGA-BA-6870-01A
0 years, female, black or african american, stage:'--, dead, 451 days
9.2
TCGA-BB-A5HZ-01A
0 years, male, white, stage:Stage IVA, alive, 827 days
9.2
TCGA-CV-A465-01A
0 years, male, white, stage:Stage III, dead, 215 days
9.1
TCGA-CQ-6223-01A
0 years, male, white, stage:Stage II, alive, 1428 days
9.0
TCGA-IQ-7632-01A
0 years, female, white, stage:Stage IVA, alive, 441 days
9.0
TCGA-BB-4224-01A
0 years, male, white, stage:Stage IVA, alive, 278 days
9.0
TCGA-CV-6938-01A
0 years, male, white, stage:Stage II, dead, 144 days
8.9
TCGA-CN-4722-01A
0 years, female, white, stage:Stage II, alive, 1483 days
8.9
TCGA-H7-A6C4-01A
0 years, female, white, stage:Stage IVA, dead, 414 days
8.8
TCGA-CV-7423-01A
0 years, male, white, stage:Stage II, dead, 3059 days
8.8
TCGA-CN-5365-01A
0 years, male, white, stage:Stage IVB, dead, 351 days
8.8
TCGA-CV-A6JU-01A
0 years, female, white, stage:Stage IVB, alive, 110 days
8.8
TCGA-F7-A50J-01A
0 years, female, white, stage:Stage III, alive, 947 days
8.7
TCGA-QK-A6VC-01A
0 years, female, black or african american, stage:Stage IVA, alive, 600 days
8.5
TCGA-CN-4725-01A
0 years, male, white, stage:Stage II, alive, 1157 days
8.5
TCGA-CV-5442-01A
0 years, female, white, stage:Stage IVA, alive, 2327 days
8.2
TCGA-CV-7568-01A
0 years, female, white, stage:Stage IVA, dead, 927 days
8.1
TCGA-DQ-7588-01A
0 years, male, white, stage:'--, dead, 427 days
8.1
TCGA-CV-A6JT-01A
0 years, male, white, stage:Stage II, alive, 852 days
8.0
TCGA-CV-7180-01A
0 years, male, white, stage:Stage II, dead, 327 days
8.0
TCGA-CV-A45V-01A
0 years, female, white, stage:Stage IVA, dead, 32 days
8.0
TCGA-CN-4727-01A
0 years, male, white, stage:Stage IVA, alive, 1560 days
7.9
TCGA-BA-7269-01A
0 years, male, white, stage:Stage III, alive, 1273 days
7.9
TCGA-MT-A51W-01A
0 years, female, white, stage:Stage I, alive, 437 days
7.6
TCGA-P3-A5Q5-01A
0 years, male, white, stage:Stage IVA, alive, 910 days
7.6
TCGA-T2-A6X2-01A
0 years, male, white, stage:Stage III, alive, 987 days
7.6
TCGA-MZ-A7D7-01A
0 years, male, white, stage:Stage IVA, alive, 547 days
7.5
TCGA-MT-A7BN-01A
0 years, male, white, stage:Stage IVA, alive, 469 days
7.4
TCGA-H7-7774-01A
0 years, female, white, stage:Stage IVA, alive, 407 days
7.4
TCGA-CQ-A4CE-01A
0 years, female, stage:Stage II, alive, 897 days
7.2
TCGA-CV-7432-01A
0 years, male, white, stage:Stage II, dead, 2570 days
7.0
TCGA-F7-A50G-01A
0 years, male, white, stage:Stage III, alive, 616 days
7.0
TCGA-CV-7411-01A
0 years, female, white, stage:Stage IVA, dead, 2717 days
7.0
TCGA-QK-A6IJ-01A
0 years, male, white, stage:Stage III, alive, 387 days
7.0
TCGA-CV-A45P-01A
0 years, female, white, stage:Stage I, alive, 639 days
6.9
TCGA-P3-A6T5-01A
0 years, female, white, stage:Stage IVA, dead, 882 days
6.8
TCGA-QK-A6IH-01A
0 years, female, white, stage:Stage IVB, alive, 653 days
6.8
TCGA-IQ-A61G-01A
0 years, male, white, stage:Stage IVA, alive, 360 days
6.8
TCGA-CQ-7071-01A
0 years, female, white, stage:Stage III, alive, 1311 days
6.8
TCGA-CN-6998-01A
0 years, male, white, stage:Stage IVA, dead, 357 days
6.7
TCGA-D6-A6EM-01A
0 years, female, white, stage:Stage III, alive, 232 days
6.6
TCGA-CV-6955-01A
0 years, female, white, stage:Stage II, dead, 334 days
6.6
TCGA-CN-A641-01A
0 years, male, white, stage:Stage IVA, alive, 367 days
6.6
TCGA-HD-8634-01A
0 years, female, white, stage:Stage I, dead, 385 days
6.4
TCGA-D6-A6EN-01A
0 years, male, white, stage:Stage III, alive, 687 days
6.1
TCGA-CN-4726-01A
0 years, male, white, stage:Stage IVA, dead, 142 days
6.1
TCGA-CV-6436-01A
0 years, male, white, stage:Stage IVA, alive, 1899 days
5.9
TCGA-CV-A45X-01A
0 years, male, white, stage:Stage IVA, dead, 198 days
5.7
TCGA-CV-7183-01A
0 years, male, white, stage:Stage II, alive, 3981 days
5.5
TCGA-F7-A622-01A
0 years, male, white, stage:Stage III, dead, 359 days
4.9
TCGA-CV-A6JN-01A
0 years, male, white, stage:'--, alive, 906 days
4.8
TCGA-CV-6953-01A
0 years, female, white, stage:Stage III, dead, 1641 days
4.8
TCGA-CV-A463-01A
0 years, female, white, stage:Stage IVA, dead, 23 days
4.7
TCGA-CV-A6K1-01A
0 years, male, white, stage:Stage IVA, alive, 685 days
4.2
TCGA-BA-A6DA-01A
0 years, female, white, stage:Stage IVA, alive, 351 days
3.8
TCGA-CV-A6JY-01A
0 years, male, white, stage:Stage IVA, alive, 646 days
3.5
TCGA-MT-A67A-01A
0 years, female, white, stage:Stage I, alive, 914 days
3.4
TCGA-UF-A7JS-01A
0 years, male, white, stage:Stage IVA, dead, 680 days
3.3
TCGA-CV-A45Q-01A
0 years, female, white, stage:'--, dead, 5152 days
3.3
TCGA-QK-A6II-01A
0 years, male, white, stage:Stage IVA, dead, 284 days
2.7
TCGA-HD-A6I0-01A
0 years, male, white, stage:Stage IVA, alive, 210 days
2.5
TCGA-D6-A6EK-01A
0 years, male, white, stage:Stage III, alive, 875 days
2.5
TCGA-CV-A45O-01A
0 years, male, white, stage:'--, alive, 851 days
1.7
TCGA-D6-A6ES-01A
0 years, male, white, stage:Stage IVA, alive, 389 days
1.6
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HEAD AND NECK SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
183
Samples
Sample ID
Sample type
nRPX
CPT0195680003
Tumor
1.2
CPT0245500003
Tumor
1.0
CPT0163090003
Tumor
0.7
CPT0194790003
Tumor
0.6
CPT0163160003
Tumor
0.6
CPT0013130003
Tumor
0.6
CPT0222180003
Tumor
0.6
CPT0084630009
Tumor
0.5
CPT0190850003
Tumor
0.5
CPT0250310003
Tumor
0.5
CPT0245060004
Tumor
0.5
CPT0248330003
Tumor
0.5
CPT0246590003
Tumor
0.5
CPT0087820003
Tumor
0.5
CPT0223970003
Tumor
0.5
CPT0244890004
Tumor
0.4
CPT0245230004
Tumor
0.4
CPT0163530003
Tumor
0.4
CPT0245550003
Tumor
0.4
CPT0169730003
Tumor
0.4
CPT0226250004
Tumor
0.4
CPT0163650003
Tumor
0.3
CPT0094280004
Tumor
0.3
CPT0226130003
Tumor
0.3
CPT0163340003
Tumor
0.3
CPT0246540003
Tumor
0.3
CPT0163840003
Tumor
0.3
CPT0024810003
Tumor
0.3
CPT0013250003
Normal
0.3
CPT0177390003
Tumor
0.3
CPT0013210004
Tumor
0.3
CPT0195700003
Normal
0.3
C3N-01620-05
Normal
0.3
CPT0011130005
Tumor
0.2
CPT0163910003
Tumor
0.2
CPT0163790003
Tumor
0.2
CPT0094560004
Tumor
0.2
CPT0163410003
Tumor
0.2
CPT0127050003
Tumor
0.2
CPT0199820003
Tumor
0.2
CPT0088430003
Normal
0.2
CPT0245450003
Tumor
0.2
CPT0194250003
Tumor
0.2
CPT0008630003
Tumor
0.2
CPT0196040003
Tumor
0.2
CPT0245400003
Tumor
0.2
CPT0088410003
Tumor
0.2
CPT0246620003
Tumor
0.1
CPT0008960003
Normal
0.1
CPT0013460003
Normal
0.1
CPT0195880003
Normal
0.1
CPT0123180003
Tumor
0.1
CPT0013430003
Tumor
0.1
CPT0226390003
Tumor
0.1
CPT0013030003
Normal
0.1
CPT0235460003
Tumor
0.1
CPT0261520003
Tumor
0.1
CPT0162990004
Tumor
0.1
CPT0226030003
Tumor
0.1
CPT0008520008
Tumor
0.1
CPT0223460003
Normal
0.1
CPT0011320003
Normal
0.0
CPT0207870004
Tumor
0.0
CPT0256560003
Tumor
0.0
CPT0237150003
Normal
0.0
CPT0087990003
Tumor
0.0
CPT0226400003
Normal
0.0
CPT0245350003
Tumor
0.0
CPT0162890003
Tumor
0.0
CPT0163250003
Normal
0.0
CPT0162940003
Tumor
0.0
C3N-04276-06
Normal
0.0
CPT0163860003
Normal
0.0
CPT0169920003
Normal
0.0
CPT0220610003
Tumor
0.0
CPT0245190003
Normal
0.0
CPT0194260003
Normal
0.0
CPT0184530003
Tumor
0.0
CPT0084650004
Normal
0.0
CPT0177710003
Tumor
0.0
CPT0177200003
Tumor
0.0
CPT0008930003
Tumor
0.0
CPT0236850004
Tumor
0.0
CPT0163170003
Normal
0.0
CPT0220620003
Normal
0.0
CPT0237500003
Normal
-0.1
CPT0190860003
Normal
-0.1
CPT0245730003
Tumor
-0.1
CPT0163740003
Tumor
-0.1
CPT0088060004
Tumor
-0.1
CPT0245180003
Tumor
-0.1
CPT0235920003
Normal
-0.1
CPT0226440003
Tumor
-0.1
CPT0245680003
Tumor
-0.1
CPT0013000004
Tumor
-0.1
CPT0245410003
Normal
-0.1
CPT0177010003
Tumor
-0.1
CPT0163430003
Normal
-0.1
CPT0222360003
Tumor
-0.1
C3N-01859-04
Normal
-0.1
CPT0176770003
Tumor
-0.1
CPT0123260003
Tumor
-0.1
CPT0163490003
Normal
-0.1
CPT0236870003
Normal
-0.1
CPT0094420004
Tumor
-0.1
CPT0163480003
Tumor
-0.1
CPT0223450003
Tumor
-0.1
CPT0169890003
Tumor
-0.1
CPT0245140003
Normal
-0.1
CPT0163020003
Normal
-0.1
CPT0237480004
Tumor
-0.1
CPT0237130004
Tumor
-0.1
CPT0095040003
Tumor
-0.1
CPT0163600003
Tumor
-0.1
C3N-01758-04
Normal
-0.1
CPT0243090003
Tumor
-0.1
CPT0196210003
Tumor
-0.1
CPT0011290003
Tumor
-0.2
C3N-04275-05
Normal
-0.2
CPT0245020003
Normal
-0.2
CPT0199710003
Normal
-0.2
CPT0245010003
Tumor
-0.2
CPT0245630003
Tumor
-0.2
CPT0163720003
Normal
-0.2
CPT0199880003
Tumor
-0.2
C3N-00295-05
Normal
-0.2
CPT0201830004
Tumor
-0.2
CPT0236620003
Tumor
-0.2
CPT0242000004
Normal
-0.2
CPT0123280003
Normal
-0.2
CPT0248350003
Normal
-0.2
CPT0194420003
Tumor
-0.2
CPT0194960003
Tumor
-0.2
CPT0199830003
Normal
-0.2
CPT0226450003
Normal
-0.2
CPT0199890003
Normal
-0.2
CPT0245460003
Normal
-0.2
CPT0226090003
Normal
-0.2
CPT0163800003
Normal
-0.2
CPT0088080003
Normal
-0.2
CPT0241980004
Tumor
-0.2
CPT0226270003
Normal
-0.2
CPT0243140004
Normal
-0.3
CPT0237640003
Normal
-0.3
CPT0237620004
Tumor
-0.3
CPT0245300003
Tumor
-0.3
C3N-04279-05
Normal
-0.3
CPT0229220002
Normal
-0.3
CPT0194800003
Normal
-0.3
CPT0088010003
Normal
-0.3
CPT0235910003
Tumor
-0.3
CPT0245560003
Normal
-0.3
CPT0226350003
Normal
-0.3
CPT0281470002
Normal
-0.3
CPT0094490004
Tumor
-0.3
CPT0201860004
Normal
-0.3
CPT0235470002
Normal
-0.3
CPT0196060003
Normal
-0.3
CPT0246670003
Tumor
-0.3
CPT0278700002
Normal
-0.3
CPT0177220003
Normal
-0.3
CPT0236640003
Normal
-0.4
CPT0094350004
Tumor
-0.4
CPT0226340003
Tumor
-0.4
CPT0094580003
Normal
-0.4
C3N-00857-05
Normal
-0.4
CPT0163240003
Tumor
-0.4
CPT0199700003
Tumor
-0.4
CPT0195860003
Tumor
-0.4
CPT0248520003
Tumor
-0.4
CPT0169740004
Normal
-0.5
CPT0123190003
Normal
-0.5
CPT0244940004
Tumor
-0.5
CPT0245130003
Tumor
-0.5
CPT0169640003
Tumor
-0.5
CPT0222200003
Normal
-0.5
CPT0163610003
Normal
-0.5
C3N-02693-06
Normal
-0.6
CPT0245600003
Tumor
-0.7
CPT0229230003
Normal
N/A
CPT0169750003
Normal
N/A
CPT0229210003
Tumor
N/A
CPT0229190003
Tumor
N/A
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HEAD AND NECK CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
