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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MYL9 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
355.1
Number of samples
349
Samples
Sample
Description
TPM
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
2269.7
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
1772.3
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
1672.5
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1233.3
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
1041.0
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
1037.2
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
1025.0
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
1005.2
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
936.4
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
913.6
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
868.1
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
777.9
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
762.5
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
749.0
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
746.7
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
742.5
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
729.3
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
729.0
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
726.7
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
722.2
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
720.4
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
719.3
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
716.9
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
712.7
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
709.6
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
701.8
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
701.2
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
697.8
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
693.0
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
692.6
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
677.1
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
676.9
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
676.4
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
675.2
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
674.6
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
670.8
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
667.8
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
654.1
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
644.1
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
643.2
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
643.1
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
639.3
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
632.2
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
628.1
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
627.0
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
624.0
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
621.9
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
621.8
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
620.1
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
613.2
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
608.9
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
593.0
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
591.6
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
590.0
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
577.3
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
576.4
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
575.2
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
574.3
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
573.6
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
566.6
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
564.8
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
561.4
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
554.5
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
546.5
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
544.8
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
543.6
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
542.5
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
541.1
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
523.2
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
521.8
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
520.3
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
519.6
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
519.4
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
519.0
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
517.6
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
510.3
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
507.7
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
502.1
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
501.6
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
501.0
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
496.9
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
492.3
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
492.0
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
489.0
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
487.4
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
486.8
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
483.7
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
479.1
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
478.2
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
475.4
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
469.2
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
468.0
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
458.6
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
455.5
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
453.5
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
452.3
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
449.6
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
448.9
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
448.7
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
444.9
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
443.2
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
437.9
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
431.5
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
431.1
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
430.0
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
429.0
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
428.3
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
427.2
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
426.8
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
423.3
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
420.8
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
420.0
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
417.4
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
417.1
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
416.8
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
412.4
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
412.0
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
411.2
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
410.5
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
407.8
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
407.6
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
405.6
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
404.4
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
403.2
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
400.6
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
393.1
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
390.2
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
388.7
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
388.1
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
382.0
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
380.9
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
380.1
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
379.8
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
377.7
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
375.0
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
359.0
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
358.9
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
357.2
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
356.4
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
354.3
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
354.0
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
349.8
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
346.7
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
345.8
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
345.4
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
344.5
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
343.0
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
342.3
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
342.1
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
338.2
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
337.4
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
333.1
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
329.4
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
325.7
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
322.8
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
321.6
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
321.4
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
321.3
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
319.7
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
319.5
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
317.7
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
317.5
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
317.0
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
315.3
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
309.2
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
308.0
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
306.5
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
305.9
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
303.7
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
302.4
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
300.1
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
299.9
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
297.3
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
296.5
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
296.2
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
295.2
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
290.9
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
290.7
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
289.7
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
289.2
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
287.6
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
287.1
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
286.0
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
280.6
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
280.2
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
280.0
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
278.6
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
277.0
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
276.1
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
274.5
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
271.0
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
269.6
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
268.5
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
265.5
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
265.3
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
265.2
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
265.1
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
265.1
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
262.2
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
261.1
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
261.0
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
259.7
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
259.5
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
259.4
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
259.3
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
257.8
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
257.0
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
255.9
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
255.2
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
253.5
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
253.0
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
252.4
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
250.1
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
249.3
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
245.0
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
242.9
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
240.7
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
238.9
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
238.4
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
233.5
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
230.2
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
227.2
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
226.3
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
224.9
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
223.1
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
222.6
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
220.6
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
219.4
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
216.9
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
214.7
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
213.8
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
211.6
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
208.0
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
205.5
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
203.9
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
198.5
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
197.3
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
197.0
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
193.0
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
192.1
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
191.8
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
191.3
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
187.0
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
184.8
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
184.2
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
183.9
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
182.3
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
182.0
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
180.3
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
180.3
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
179.5
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
177.5
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
177.4
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
176.7
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
176.2
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
174.1
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
173.7
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
171.0
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
170.5
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
169.6
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
169.6
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
168.7
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
167.3
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
167.2
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
166.3
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
165.7
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
165.3
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
165.1
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
163.8
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
162.8
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
161.4
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
161.3
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
160.9
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
159.6
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
159.5
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
157.0
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
156.6
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
155.5
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
155.2
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
154.4
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
153.8
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
153.7
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
153.5
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
152.5
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
152.1
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
150.2
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
140.5
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
140.3
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
139.9
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
138.8
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
138.3
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
133.4
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
132.6
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
132.5
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
132.3
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
131.8
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
131.5
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
131.2
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
131.0
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
129.9
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
127.4
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
126.0
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
125.4
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
125.3
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
124.5
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
122.5
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
122.2
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
120.8
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
119.1
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
118.1
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
115.0
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
115.0
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
107.6
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
106.5
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
106.1
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
104.5
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
104.0
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
103.2
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
102.1
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
101.1
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
98.3
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
96.9
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
94.3
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
93.5
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
91.9
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
89.8
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
88.7
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
88.3
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
86.2
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
85.7
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
84.1
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
83.2
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
82.5
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
80.7
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
79.1
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
78.6
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
77.0
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
74.5
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
71.2
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
70.9
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
69.5
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
67.7
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
65.9
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
65.0
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
58.1
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
52.0
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
50.5
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
49.7
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MYL9 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
209.5
Number of samples
81
Samples
Sample
Description
TPM
DO46448
0 years, female, NA, stage:III, dead, 654 days
1067.7
DO46376
0 years, female, NA, stage:III, dead, 1430 days
800.2
DO46392
0 years, female, NA, stage:III, dead, 628 days
738.0
DO46453
0 years, female, NA, stage:III, dead, 3294 days
591.2
DO46325
0 years, female, NA, stage:III, dead, 477 days
487.6
DO46402
0 years, female, NA, stage:III, dead, 511 days
462.7
DO46508
0 years, female, NA, stage:III, dead, 2101 days
458.4
DO46332
0 years, female, NA, stage:III, dead, 689 days
452.8
DO46364
0 years, female, NA, stage:III, dead, 806 days
424.9
DO46551
0 years, female, NA, stage:III, dead, 1055 days
404.1
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
384.1
DO46382
0 years, female, NA, stage:IV, dead, 311 days
368.1
DO46348
0 years, female, NA, stage:IV, dead, 287 days
362.8
DO46493
0 years, female, NA, stage:IV, alive, 839 days
350.3
DO46384
0 years, female, NA, stage:III, dead, 614 days
327.0
DO46326
0 years, female, NA, stage:III, dead, 701 days
288.8
DO46597
0 years, female, NA, stage:III, dead, 393 days
287.9
DO46560
0 years, female, NA, stage:IV, dead, 286 days
276.2
DO46443
0 years, female, NA, stage:III, dead, 2464 days
269.5
DO46344
0 years, female, NA, stage:III, dead, 642 days
265.0
DO46342
0 years, female, NA, stage:III, dead, 1398 days
255.3
DO46340
0 years, female, NA, stage:III, dead, 616 days
250.4
DO46346
0 years, female, NA, stage:III, dead, 1187 days
244.9
DO46368
0 years, female, NA, stage:III, dead, 2879 days
238.9
DO46398
0 years, female, NA, stage:III, alive, 437 days
235.5
DO46591
0 years, female, NA, stage:III, dead, 195 days
233.3
DO46463
0 years, female, NA, stage:III, dead, 2451 days
230.2
DO46396
0 years, female, NA, stage:III, dead, 583 days
225.6
DO46372
0 years, female, NA, stage:III, dead, 1326 days
218.1
DO46400
0 years, female, NA, stage:III, dead, 719 days
207.5
DO46408
0 years, female, NA, stage:III, dead, 489 days
204.7
DO46388
0 years, female, NA, stage:III, dead, 413 days
202.9
DO46581
0 years, female, NA, stage:III, dead, 408 days
199.9
DO46334
0 years, female, NA, stage:III, dead, 496 days
197.4
DO46528
0 years, female, NA, stage:III, alive, 6139 days
179.1
DO46327
0 years, female, NA, stage:III, dead, 184 days
178.1
DO46378
0 years, female, NA, stage:III, alive, 843 days
174.6
DO46338
0 years, female, NA, stage:III, dead, 596 days
167.7
DO46566
0 years, female, NA, stage:III, dead, 673 days
166.9
DO46336
0 years, female, NA, stage:IV, dead, 664 days
164.8
DO46329
0 years, female, NA, stage:III, dead, 1699 days
162.6
DO46328
0 years, female, NA, stage:III, dead, 972 days
159.9
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
156.2
DO46571
0 years, female, NA, stage:III, dead, 243 days
156.1
DO46374
0 years, female, NA, stage:III, dead, 1409 days
148.2
DO46432
0 years, female, NA, stage:III, alive, 2218 days
142.4
DO46588
0 years, female, NA, stage:III, dead, 438 days
140.1
DO46352
0 years, female, NA, stage:III, dead, 677 days
134.3
DO46533
0 years, female, NA, stage:III, alive, 3667 days
133.4
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
131.0
DO46358
0 years, female, NA, stage:III, dead, 423 days
129.6
DO46386
0 years, female, NA, stage:III, dead, 1162 days
126.6
DO46350
0 years, female, NA, stage:III, dead, 886 days
119.1
DO46354
0 years, female, NA, stage:III, dead, 843 days
115.8
DO46468
0 years, female, NA, stage:III, alive, 2776 days
108.6
DO46606
0 years, female, NA, stage:III, alive, 804 days
104.5
DO46546
0 years, female, NA, stage:III, dead, 1889 days
103.9
DO46390
0 years, female, NA, stage:III, dead, 374 days
99.9
DO46404
0 years, female, NA, stage:III, dead, 690 days
96.4
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
95.8
DO46330
0 years, female, NA, stage:III, dead, 684 days
91.4
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
87.5
DO46370
0 years, female, NA, stage:III, dead, 1727 days
83.4
DO46412
0 years, female, NA, stage:III, dead, 597 days
81.2
DO46331
0 years, female, NA, stage:III, dead, 612 days
76.9
DO46602
0 years, female, NA, stage:III, dead, 205 days
75.4
DO46518
0 years, female, NA, stage:III, alive, 2960 days
75.3
DO46576
0 years, female, NA, stage:III, alive, 133 days
71.1
DO46568
0 years, female, NA, stage:III, dead, 320 days
67.9
DO46362
0 years, female, NA, stage:III, dead, 1639 days
67.2
DO46356
0 years, female, NA, stage:III, dead, 911 days
65.5
DO46380
0 years, female, NA, stage:III, dead, 1423 days
51.1
DO46333
0 years, female, NA, stage:III, dead, 359 days
47.8
DO46586
0 years, female, NA, stage:III, dead, 1019 days
42.4
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
41.1
DO46436
0 years, female, NA, stage:III, alive, 3193 days
39.4
DO46561
0 years, female, NA, stage:III, dead, 195 days
33.6
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
21.3
DO46538
0 years, female, NA, stage:III, dead, 1527 days
19.3
DO46611
0 years, female, NA, stage:III, dead, 734 days
13.5
DO46366
0 years, female, NA, stage:III, dead, 2054 days
12.9
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
340a3769-3031-41ae-bb08-a2f696_D2
Normal
2.0
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
1.7
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
1.7
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
1.4
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
1.3
15524912-685a-47ce-a824-567848_D2
Tumor
1.2
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
1.2
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
1.2
1772e913-f62e-446a-8cf3-720348_D2
Tumor
1.1
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
1.1
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
1.1
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
1.1
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
1.0
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
1.0
a3a26070-fb84-406a-8280-d555e6_D2
Normal
1.0
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
1.0
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
1.0
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
1.0
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
1.0
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
0.9
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
0.9
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
0.9
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
0.9
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
0.9
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
0.9
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
0.8
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
0.8
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
0.8
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
0.8
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
0.8
285fed94-1495-448e-879b-b55de9_D2
Tumor
0.8
a65d8e76-640f-4341-a561-afbb57_D2
Normal
0.7
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.7
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
0.7
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
0.6
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
0.6
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
0.6
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
0.6
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
0.6
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
0.5
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
0.5
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
0.5
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
0.5
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
0.5
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
0.4
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
0.4
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
0.4
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
0.4
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
0.4
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
0.3
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
0.3
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
0.3
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
0.3
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
0.3
1a10c200-3895-4648-b951-94f99f_D2
Tumor
0.2
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
0.2
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
0.2
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
0.2
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
0.2
e9d416e7-f661-400a-896e-388545_D2
Tumor
0.2
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.2
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
0.2
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
0.2
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
0.1
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
0.1
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
0.1
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
0.1
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.1
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
0.0
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
0.0
1db5574d-aca7-403c-8100-6e705f_D2
Normal
0.0
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
0.0
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
0.0
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
0.0
2f901c90-617e-46da-9fac-d68369_D2
Tumor
-0.1
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-0.1
10c2d629-0287-4511-ac25-f29031_D2
Tumor
-0.1
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-0.1
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-0.2
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-0.2
161317f3-1a39-438e-af45-cd2502_D2
Tumor
-0.2
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
-0.2
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
-0.2
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
-0.2
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-0.2
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
-0.3
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
-0.3
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
-0.3
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
-0.3
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
-0.4
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-0.4
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-0.4
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-0.5
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
-0.5
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
-0.5
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
-0.5
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
-0.5
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
-0.5
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
-0.6
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-0.6
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-0.7
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
-0.7
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
-0.8
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
-0.8
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-0.9
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-0.9
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-1.0
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
-1.1
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.