COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Medium
Peripheral nerve/ganglion: Not detected
RNA expressioni
Consensus:44.8 nTPM
HPA:44.8 nTPM
GTEx:22.7 nTPM
FANTOM5:28.6 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION
Neuroendocrine cellsTuft cellsColonocytesGoblet cellsT-cellsNK-cellsEnteric transient amplifying cellsEnteric stem cells020406080100120140nCPM

COLON - Antibody stainingi
Antibody HPA026980
Endothelial cells Not detected
Glandular cells Medium
Peripheral nerve/ganglion Not detected



COLON - HPA RNA-seqi
Average nTPMi 44.8
overview
Male, age 54
Colon sample 67
nTPM: 47.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 40.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 43.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 37.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 47.4
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 40.8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 42.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 45.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 45.9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 57
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 54.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 41.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 37.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 22.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 18.3
Samples: 419

Max nTPM: 33.8
Min nTPM: 9.5
Std nTPM: 4.4
Median nTPM: 17.7
GTEX-WOFM-1926-SM-4M9R2 20-29 years, male 33.8
GTEX-17EUY-1726-SM-79OK4 20-29 years, male 33.6
GTEX-15FZZ-1826-SM-6LLJP 30-39 years, female 33.0
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 32.3
GTEX-11UD2-2226-SM-GI4WZ 50-59 years, male 32.3
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 31.2
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 31.1
GTEX-VJYA-2126-SM-4KL1O 60-69 years, male 30.4
GTEX-X5EB-1126-SM-46MVV 40-49 years, male 29.1
GTEX-1K9T9-2926-SM-E9TKD 50-59 years, female 28.6
GTEX-W5WG-2026-SM-4LMIB 50-59 years, female 28.3
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17.921.926.88.239.50510152025303540
Colon - Transverse
Average nTPM: 22.7
Samples: 479

Max nTPM: 44.7
Min nTPM: 8.2
Std nTPM: 6.2
Median nTPM: 21.9
GTEX-ZT9X-1126-SM-HLJS3 40-49 years, male 44.7
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 42.1
GTEX-144GM-1226-SM-5LU52 20-29 years, male 42.1
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 39.5
GTEX-1IKOE-2026-SM-AHZ31 30-39 years, female 39.3
GTEX-1C475-1626-SM-731FP 40-49 years, female 39.2
GTEX-12BJ1-2126-SM-5BC5O 60-69 years, male 37.3
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 37.2
GTEX-13X6H-1926-SM-5O9DD 50-59 years, female 37.0
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 36.5
GTEX-14XAO-2026-SM-69LOI 60-69 years, female 36.1
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COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 28.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 28.6
FF:10014-101C5 62,83,84 years, mixed 28.6

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