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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
62.2
nTPM
HPA Brain:
67.8
nTPM
GTEx:
62.2
nTPM
FANTOM5:
154.4
Scaled Tags Per Million
Pig:
62.7
nTPM
Mouse:
163.4
nTPM
Allen mouse:
10.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
67.8
Sample id
Sample description
nTPM
Amygdala nTPM: 67.8
2814
Male, age 76, right hemisphere
81.5
2695
Female, age 67, right hemisphere
77.2
1987
Female, age 91, left hemisphere
67.1
2514
Male, age 75, right hemisphere
65.7
2517
Female, age 94, left hemisphere
47.4
Basal amygdala nTPM: 56.5
2609
Male, age 75, right hemisphere
62.1
1955
Male, age 76, both hemispheres
61.3
2243
Female, age 91, right hemisphere
59.8
2110
Male, age 80, left hemisphere
58.3
2685
Female, age 94, left hemisphere
51.2
2827
Female, age 67, right hemisphere
46.3
Central amygdala nTPM: 58.0
1905
Male, age 76, both hemispheres
70.8
2239
Male, age 80, left hemisphere
59.9
2701
Female, age 91, right hemisphere
59.3
2515
Male, age 75, right hemisphere
54.7
2826
Female, age 94, left hemisphere
45.6
Corticomedial amygdala nTPM: 57.1
2829
Male, age 80, left hemisphere
65.6
2429
Female, age 94, left hemisphere
61.3
2240
Male, age 76, both hemispheres
57.0
2242
Female, age 91, right hemisphere
56.8
2428
Male, age 75, right hemisphere
54.8
2535
Female, age 67, right hemisphere
46.9
Lateral amygdala nTPM: 57.0
1883
Male, age 76, both hemispheres
73.5
2516
Male, age 75, right hemisphere
62.7
2255
Female, age 91, right hemisphere
60.8
2256
Male, age 80, left hemisphere
51.7
2534
Female, age 94, left hemisphere
50.6
2830
Female, age 67, right hemisphere
42.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
62.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 62.2
Samples: 152
Max nTPM: 139.5
Min nTPM: 24.7
Std nTPM: 17.8
Median nTPM: 60.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
139.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
111.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
100.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
100.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
99.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
93.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
93.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
92.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
89.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
89.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
87.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
87.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
86.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
85.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
84.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
83.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
82.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
82.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
82.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
81.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
81.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
81.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
80.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
80.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
79.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
79.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
79.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
78.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
78.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
78.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
77.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
77.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
77.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
76.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
75.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
75.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
75.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
74.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
74.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
74.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
74.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
73.8
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
73.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
71.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
71.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
70.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
70.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
69.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
69.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
68.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
68.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
68.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
67.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
67.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
67.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
66.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
66.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
66.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
66.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
65.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
65.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
65.5
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
65.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
65.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
64.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
64.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
64.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
64.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
62.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
62.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
62.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
61.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
61.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
61.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
60.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
60.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
60.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
59.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
59.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
59.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
58.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
58.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
58.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
57.6
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
56.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
56.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
55.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
55.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
55.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
54.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
54.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
54.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
54.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
54.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
54.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
53.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
53.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
52.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
52.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
52.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
52.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
51.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
51.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
51.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
51.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
51.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
51.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
51.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
51.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
51.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
50.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
50.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
50.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
50.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
50.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
50.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
49.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
49.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
49.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
48.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
47.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
47.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
47.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
46.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
46.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
46.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
46.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
45.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
45.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
45.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
44.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
44.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
43.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
42.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
41.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
41.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
41.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
41.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
40.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
40.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
40.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
39.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
37.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
36.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
36.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
36.4
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
35.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
32.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
27.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
27.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
26.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
24.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
163.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 163.4
Samples: 4
Max nTPM: 193.6
Min nTPM: 149.9
Sample A
Male
193.6
Sample B
Male
157.7
Sample C
Female
152.4
Sample D
Female
149.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.