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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GNAS is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1420.4
Number of samples
349
Samples
Sample
Description
TPM
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
4395.1
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
4215.9
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
4165.6
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
3954.6
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
3747.3
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
3695.9
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
3510.1
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
3195.4
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
3171.3
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
3158.7
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
3143.9
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
3102.2
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
2990.3
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
2937.3
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
2838.4
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
2806.7
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
2691.5
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
2690.7
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
2661.4
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
2640.8
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
2527.7
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
2467.7
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
2465.9
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
2406.6
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
2380.1
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
2331.8
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
2325.6
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
2325.4
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
2320.7
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
2311.8
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
2288.3
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
2288.2
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
2237.8
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
2233.8
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
2228.4
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
2193.8
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
2191.9
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
2182.6
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
2176.7
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
2175.8
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
2141.7
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
2129.6
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
2102.8
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
2102.0
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
2098.5
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
2097.4
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
2093.5
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
2090.1
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
2089.9
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
2088.5
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
2084.9
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
2051.9
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
2043.6
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
2037.7
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
2037.2
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
2031.8
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
2030.5
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
2023.8
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
2021.0
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
2017.9
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
2014.3
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
2012.2
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
2010.8
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
2009.9
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
1983.9
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
1955.7
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
1932.8
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
1931.5
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
1925.9
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
1922.9
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
1911.8
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
1906.8
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
1897.4
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
1895.8
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
1872.6
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
1866.9
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
1863.3
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
1853.1
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
1806.7
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
1786.8
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
1770.8
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
1761.7
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
1758.5
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
1742.3
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
1732.9
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
1712.4
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1709.1
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
1706.0
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
1700.8
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
1696.0
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
1695.1
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
1695.0
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
1685.5
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
1685.1
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
1684.3
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
1680.4
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
1680.1
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
1675.4
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
1663.4
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
1653.3
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
1621.7
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
1621.6
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
1620.7
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
1613.0
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
1612.1
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
1606.2
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
1596.7
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
1591.0
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
1576.4
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
1565.4
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
1565.1
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
1546.4
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
1545.0
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
1531.6
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
1531.5
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
1531.0
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
1529.8
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
1529.4
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
1515.8
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
1511.7
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
1510.6
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
1504.7
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
1504.0
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
1499.4
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
1492.8
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
1481.4
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
1465.1
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
1461.2
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
1460.5
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
1444.7
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
1443.3
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
1437.7
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
1436.1
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
1431.2
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
1431.1
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1428.7
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
1424.7
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
1419.3
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
1418.1
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
1415.2
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
1413.4
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
1409.7
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
1404.8
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
1387.7
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
1387.2
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
1385.8
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
1383.6
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
1382.7
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
1379.8
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
1377.0
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
1376.7
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
1374.6
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
1373.7
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
1367.9
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
1363.7
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
1360.0
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
1357.2
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
1357.0
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
1356.5
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1355.6
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
1349.3
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
1343.5
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
1337.6
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
1336.7
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
1326.2
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
1325.2
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
1322.5
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
1320.3
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
1320.0
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
1317.8
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
1315.1
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
1312.6
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
1310.6
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
1308.7
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
1303.1
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
1300.9
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
1298.4
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
1297.9
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
1297.8
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
1296.9
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
1289.3
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
1279.1
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
1271.0
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
1270.6
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
1260.8
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
1253.4
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
1252.7
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
1242.9
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
1242.9
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
1241.4
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
1238.8
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
1236.8
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
1234.2
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
1233.3
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
1230.9
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
1230.1
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
1228.8
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
1221.4
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
1220.0
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
1214.9
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
1205.8
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
1190.0
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
1189.2
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
1187.8
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
1187.6
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
1183.5
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
1178.7
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
1172.4
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
1172.2
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
1157.9
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
1157.4
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
1149.1
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
1147.4
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
1146.2
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
1145.1
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
1143.8
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
1141.0
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
1135.2
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
1133.8
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
1132.4
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
1114.8
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
1113.5
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
1107.4
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
1107.3
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
1102.0
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
1090.2
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
1089.7
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
1088.1
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
1086.1
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
1075.3
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
1074.0
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
1072.9
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
1072.8
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
1067.4
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
1059.8
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
1058.7
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
1048.8
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
1046.8
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
1046.0
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
1045.7
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
1042.5
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
1039.3
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
1037.7
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
1014.9
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
1008.3
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
1004.9
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
997.8
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
993.0
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
987.0
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
986.7
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
984.7
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
983.7
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
979.2
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
978.7
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
965.9
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
965.8
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
957.6
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
954.4
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
950.8
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
948.3
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
943.6
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
940.3
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
939.4
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
936.0
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
935.4
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
928.0
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
925.9
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
924.6
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
918.3
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
917.3
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
916.7
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
911.3
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
910.2
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
903.6
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
897.0
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
895.5
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
893.0
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
880.0
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
877.9
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
876.8
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
876.7
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
874.7
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
873.7
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
858.5
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
854.7
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
847.3
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
846.4
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
845.3
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
839.4
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
834.2
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
833.0
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
829.4
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
821.8
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
819.6
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
816.8
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
810.4
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
808.9
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
803.1
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
794.2
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
790.9
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
790.7
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
774.7
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
773.2
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
771.4
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
771.3
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
765.2
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
756.8
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
752.8
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
752.4
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
749.4
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
740.2
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
736.8
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
731.1
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
711.7
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
704.8
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
703.2
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
698.6
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
696.9
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
691.6
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
675.8
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
673.5
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
666.4
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
661.8
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
661.3
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
647.5
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
643.0
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
640.7
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
640.2
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
623.5
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
611.0
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
604.9
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
604.2
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
598.9
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
581.0
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
571.4
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
566.2
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
557.2
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
553.0
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
540.7
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
524.9
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
522.3
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
520.1
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
519.5
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
504.3
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
497.8
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
493.3
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
482.2
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
467.0
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GNAS is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
860.5
Number of samples
81
Samples
Sample
Description
TPM
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
1893.6
DO46468
0 years, female, NA, stage:III, alive, 2776 days
1890.2
DO46376
0 years, female, NA, stage:III, dead, 1430 days
1865.3
DO46331
0 years, female, NA, stage:III, dead, 612 days
1662.1
DO46463
0 years, female, NA, stage:III, dead, 2451 days
1535.9
DO46453
0 years, female, NA, stage:III, dead, 3294 days
1510.2
DO46561
0 years, female, NA, stage:III, dead, 195 days
1487.4
DO46597
0 years, female, NA, stage:III, dead, 393 days
1430.8
DO46586
0 years, female, NA, stage:III, dead, 1019 days
1424.0
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
1394.5
DO46546
0 years, female, NA, stage:III, dead, 1889 days
1283.0
DO46602
0 years, female, NA, stage:III, dead, 205 days
1280.1
DO46448
0 years, female, NA, stage:III, dead, 654 days
1264.3
DO46382
0 years, female, NA, stage:IV, dead, 311 days
1235.2
DO46538
0 years, female, NA, stage:III, dead, 1527 days
1189.0
DO46588
0 years, female, NA, stage:III, dead, 438 days
1170.8
DO46392
0 years, female, NA, stage:III, dead, 628 days
1140.3
DO46344
0 years, female, NA, stage:III, dead, 642 days
1130.1
DO46493
0 years, female, NA, stage:IV, alive, 839 days
1113.3
DO46348
0 years, female, NA, stage:IV, dead, 287 days
1095.8
DO46390
0 years, female, NA, stage:III, dead, 374 days
1075.4
DO46370
0 years, female, NA, stage:III, dead, 1727 days
1064.6
DO46372
0 years, female, NA, stage:III, dead, 1326 days
1054.2
DO46533
0 years, female, NA, stage:III, alive, 3667 days
1019.6
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
1013.5
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
995.7
DO46334
0 years, female, NA, stage:III, dead, 496 days
932.8
DO46402
0 years, female, NA, stage:III, dead, 511 days
923.1
DO46432
0 years, female, NA, stage:III, alive, 2218 days
869.2
DO46591
0 years, female, NA, stage:III, dead, 195 days
862.1
DO46581
0 years, female, NA, stage:III, dead, 408 days
855.4
DO46380
0 years, female, NA, stage:III, dead, 1423 days
853.4
DO46408
0 years, female, NA, stage:III, dead, 489 days
828.9
DO46566
0 years, female, NA, stage:III, dead, 673 days
826.1
DO46336
0 years, female, NA, stage:IV, dead, 664 days
818.0
DO46330
0 years, female, NA, stage:III, dead, 684 days
794.9
DO46551
0 years, female, NA, stage:III, dead, 1055 days
764.8
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
764.0
DO46364
0 years, female, NA, stage:III, dead, 806 days
756.9
DO46576
0 years, female, NA, stage:III, alive, 133 days
752.0
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
744.1
DO46329
0 years, female, NA, stage:III, dead, 1699 days
719.3
DO46358
0 years, female, NA, stage:III, dead, 423 days
718.6
DO46386
0 years, female, NA, stage:III, dead, 1162 days
716.6
DO46340
0 years, female, NA, stage:III, dead, 616 days
716.6
DO46400
0 years, female, NA, stage:III, dead, 719 days
713.8
DO46368
0 years, female, NA, stage:III, dead, 2879 days
712.8
DO46396
0 years, female, NA, stage:III, dead, 583 days
712.7
DO46508
0 years, female, NA, stage:III, dead, 2101 days
710.4
DO46332
0 years, female, NA, stage:III, dead, 689 days
699.5
DO46398
0 years, female, NA, stage:III, alive, 437 days
691.1
DO46325
0 years, female, NA, stage:III, dead, 477 days
690.3
DO46443
0 years, female, NA, stage:III, dead, 2464 days
685.0
DO46374
0 years, female, NA, stage:III, dead, 1409 days
684.6
DO46404
0 years, female, NA, stage:III, dead, 690 days
679.1
DO46571
0 years, female, NA, stage:III, dead, 243 days
674.3
DO46354
0 years, female, NA, stage:III, dead, 843 days
674.1
DO46560
0 years, female, NA, stage:IV, dead, 286 days
672.9
DO46338
0 years, female, NA, stage:III, dead, 596 days
662.5
DO46388
0 years, female, NA, stage:III, dead, 413 days
611.5
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
588.2
DO46346
0 years, female, NA, stage:III, dead, 1187 days
585.1
DO46378
0 years, female, NA, stage:III, alive, 843 days
577.4
DO46384
0 years, female, NA, stage:III, dead, 614 days
576.2
DO46342
0 years, female, NA, stage:III, dead, 1398 days
556.8
DO46362
0 years, female, NA, stage:III, dead, 1639 days
543.3
DO46328
0 years, female, NA, stage:III, dead, 972 days
540.3
DO46436
0 years, female, NA, stage:III, alive, 3193 days
536.6
DO46568
0 years, female, NA, stage:III, dead, 320 days
526.0
DO46333
0 years, female, NA, stage:III, dead, 359 days
517.4
DO46352
0 years, female, NA, stage:III, dead, 677 days
506.2
DO46356
0 years, female, NA, stage:III, dead, 911 days
502.1
DO46350
0 years, female, NA, stage:III, dead, 886 days
494.8
DO46326
0 years, female, NA, stage:III, dead, 701 days
474.5
DO46327
0 years, female, NA, stage:III, dead, 184 days
454.8
DO46366
0 years, female, NA, stage:III, dead, 2054 days
450.4
DO46518
0 years, female, NA, stage:III, alive, 2960 days
440.5
DO46528
0 years, female, NA, stage:III, alive, 6139 days
346.6
DO46606
0 years, female, NA, stage:III, alive, 804 days
332.1
DO46412
0 years, female, NA, stage:III, dead, 597 days
252.0
DO46611
0 years, female, NA, stage:III, dead, 734 days
191.8
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
0.8
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
0.8
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
0.6
21efd60f-6a31-4b98-9477-16a905_D2
Normal
0.6
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
0.4
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
0.2
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
0.2
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
0.1
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
0.1
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
0.0
a3a26070-fb84-406a-8280-d555e6_D2
Normal
0.0
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
0.0
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-0.1
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
-0.2
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-0.2
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-0.2
161317f3-1a39-438e-af45-cd2502_D2
Tumor
-0.2
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
-0.3
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
-0.3
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
-0.3
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
-0.3
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-0.4
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-0.4
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
-0.4
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
-0.4
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-0.4
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
-0.4
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-0.5
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-0.5
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
-0.5
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
-0.6
285fed94-1495-448e-879b-b55de9_D2
Tumor
-0.6
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
-0.6
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
-0.6
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
-0.6
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
-0.6
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
-0.6
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
-0.6
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-0.6
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
-0.7
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
-0.7
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
-0.7
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-0.7
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
-0.7
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
-0.7
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-0.7
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
-0.7
1a10c200-3895-4648-b951-94f99f_D2
Tumor
-0.7
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
-0.7
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-0.7
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
-0.7
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
-0.8
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-0.8
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-0.8
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
-0.8
10c2d629-0287-4511-ac25-f29031_D2
Tumor
-0.8
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
-0.8
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
-0.8
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
-0.8
1772e913-f62e-446a-8cf3-720348_D2
Tumor
-0.8
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
-0.8
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
-0.9
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
-0.9
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
-0.9
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
-0.9
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
-0.9
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
-1.0
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
-1.0
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
-1.0
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
-1.0
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
-1.0
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
-1.0
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
-1.1
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-1.1
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
-1.1
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
-1.1
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-1.1
340a3769-3031-41ae-bb08-a2f696_D2
Normal
-1.1
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
-1.1
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
-1.1
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
-1.1
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
-1.2
15524912-685a-47ce-a824-567848_D2
Tumor
-1.2
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
-1.2
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
-1.2
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
-1.2
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
-1.3
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
-1.3
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
-1.3
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
-1.4
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
-1.4
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
-1.4
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
-1.4
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
-1.5
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
-1.5
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
-1.5
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
-1.5
2f901c90-617e-46da-9fac-d68369_D2
Tumor
-1.5
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
-1.5
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
-1.5
e9d416e7-f661-400a-896e-388545_D2
Tumor
-1.5
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
-1.6
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
-1.7
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
-1.7
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
-1.8
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
-1.9
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
-2.0
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
-2.0
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.