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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GNAS is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
468.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
1582.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
1449.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
1406.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
1392.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
1390.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
1305.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
1284.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
1261.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
1248.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
1248.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
1194.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
1188.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
1173.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
1171.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
1162.4
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
1132.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
1117.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
1103.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
1075.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
1048.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
1034.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
1030.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
1011.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
985.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
970.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
968.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
967.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
955.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
953.9
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
947.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
941.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
927.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
913.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
892.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
877.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
876.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
855.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
845.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
844.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
821.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
808.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
789.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
784.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
780.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
779.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
778.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
766.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
765.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
752.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
738.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
731.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
724.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
723.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
721.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
712.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
711.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
702.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
698.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
695.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
694.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
691.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
690.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
683.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
675.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
675.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
674.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
668.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
667.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
666.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
664.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
662.7
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
660.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
659.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
658.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
656.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
655.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
650.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
648.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
646.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
644.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
644.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
624.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
623.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
612.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
611.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
608.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
607.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
606.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
605.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
605.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
602.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
602.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
597.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
596.6
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
592.4
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
590.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
588.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
587.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
584.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
584.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
581.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
578.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
576.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
575.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
575.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
569.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
563.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
556.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
555.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
550.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
548.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
544.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
538.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
536.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
533.6
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
531.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
531.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
528.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
523.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
522.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
520.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
517.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
509.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
509.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
503.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
500.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
499.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
496.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
492.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
487.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
486.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
483.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
481.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
479.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
479.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
479.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
478.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
477.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
472.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
472.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
470.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
464.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
464.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
463.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
463.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
461.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
460.8
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
459.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
457.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
456.6
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
455.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
454.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
450.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
446.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
445.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
444.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
442.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
437.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
437.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
434.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
434.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
431.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
430.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
430.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
430.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
428.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
426.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
424.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
424.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
422.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
417.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
416.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
415.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
415.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
415.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
414.8
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
413.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
412.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
412.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
411.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
410.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
409.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
409.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
403.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
399.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
395.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
394.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
393.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
391.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
390.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
387.6
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
387.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
381.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
378.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
378.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
376.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
375.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
370.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
366.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
366.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
365.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
364.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
363.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
359.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
357.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
356.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
356.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
353.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
349.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
347.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
346.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
346.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
343.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
343.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
340.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
339.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
338.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
338.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
336.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
335.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
335.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
334.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
332.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
329.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
329.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
328.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
328.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
327.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
325.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
325.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
324.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
324.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
321.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
320.2
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
318.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
313.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
311.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
310.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
310.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
308.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
308.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
305.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
305.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
304.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
304.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
303.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
301.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
301.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
300.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
298.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
297.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
296.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
295.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
291.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
289.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
289.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
289.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
289.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
288.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
283.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
282.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
280.6
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
279.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
278.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
277.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
274.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
274.9
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
270.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
270.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
269.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
267.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
266.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
264.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
264.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
263.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
262.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
262.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
261.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
259.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
257.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
255.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
255.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
251.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
249.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
245.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
244.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
243.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
243.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
242.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
238.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
237.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
235.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
235.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
234.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
233.4
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
233.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
232.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
227.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
227.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
225.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
223.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
221.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
221.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
221.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
220.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
217.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
211.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
211.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
208.9
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
208.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
207.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
202.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
201.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
195.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
194.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
192.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
192.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
190.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
187.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
185.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
185.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
185.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
184.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
184.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
183.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
183.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
182.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
181.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
178.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
177.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
174.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
172.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
169.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
168.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
167.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
166.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
164.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
152.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
150.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
149.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
146.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
144.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
144.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
142.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
142.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
141.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
140.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
137.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
137.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
136.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
126.4
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
121.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
121.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
104.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
103.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
100.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
69.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
68.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
53.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
42.1
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
39.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GNAS is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
453.2
Number of samples
231
Samples
Sample
Description
TPM
DO50815
0 years, male, NA, stage:3, alive, 150 days
3122.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
1427.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
1389.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
1220.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
1178.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
1154.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
1088.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
993.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
992.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
954.5
DO23549
0 years, male, NA, stage:3, alive, 990 days
945.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
935.2
DO45277
0 years, male, NA, stage:3, alive, 600 days
914.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
912.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
877.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
860.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
845.0
DO45119
0 years, male, NA, stage:3, dead, 510 days
833.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
818.8
DO48712
0 years, male, NA, stage:2, alive, 810 days
809.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
801.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
799.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
797.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
795.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
749.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
743.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
740.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
729.9
DO45103
0 years, male, NA, stage:3, alive, 450 days
729.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
714.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
699.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
691.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
680.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
674.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
658.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
647.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
635.7
DO50791
0 years, female, NA, stage:1, dead, 480 days
635.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
628.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
624.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
623.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
623.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
622.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
616.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
612.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
607.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
607.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
601.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
599.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
594.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
594.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
583.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
581.5
DO45092
0 years, male, NA, stage:4, dead, 1200 days
576.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
573.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
573.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
572.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
556.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
554.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
554.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
548.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
547.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
539.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
535.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
535.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
528.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
528.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
525.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
525.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
525.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
518.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
516.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
515.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
504.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
502.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
488.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
488.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
486.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
485.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
481.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
480.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
473.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
469.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
467.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
466.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
465.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
462.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
459.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
456.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
455.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
455.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
453.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
444.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
437.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
435.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
433.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
432.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
431.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
430.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
428.3
DO45117
0 years, female, NA, stage:2, dead, 1110 days
428.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
427.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
427.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
426.7
DO50857
0 years, male, NA, stage:2, alive, 210 days
426.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
421.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
416.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
414.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
413.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
409.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
404.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
402.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
400.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
400.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
395.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
394.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
392.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
391.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
390.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
389.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
387.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
386.9
DO45167
0 years, male, NA, stage:2, dead, 1440 days
386.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
383.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
376.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
376.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
374.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
374.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
366.9
DO45157
0 years, male, NA, stage:2, alive, 1980 days
365.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
361.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
359.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
359.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
358.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
356.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
351.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
350.5
DO45153
0 years, female, NA, stage:2, alive, 1380 days
350.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
349.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
348.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
347.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
341.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
334.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
333.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
328.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
320.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
318.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
313.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
309.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
307.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
306.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
305.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
305.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
302.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
301.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
301.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
300.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
298.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
293.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
290.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
289.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
288.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
287.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
285.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
285.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
283.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
283.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
280.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
279.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
278.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
277.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
274.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
274.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
274.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
272.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
272.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
271.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
271.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
270.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
266.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
265.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
264.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
254.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
254.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
253.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
248.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
246.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
238.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
234.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
233.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
233.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
233.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
227.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
227.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
222.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
221.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
220.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
218.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
218.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
217.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
212.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
211.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
210.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
205.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
205.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
202.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
201.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
199.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
198.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
196.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
191.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
190.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
183.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
183.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
179.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
178.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
178.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
166.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
160.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
152.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
148.3
DO50822
0 years, male, NA, stage:2, alive, 510 days
144.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
123.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
120.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
119.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
113.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
111.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
111.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
98.3
DO50839
0 years, female, NA, stage:3, alive, 330 days
73.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
34.6
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LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
192
Normal
0.6
112
Tumor
0.6
777
Tumor
0.6
221
Tumor
0.5
627
Tumor
0.5
921
Tumor
0.4
471
Tumor
0.4
617
Tumor
0.4
527
Tumor
0.4
396
Normal
0.4
444
Normal
0.4
126
Normal
0.4
881
Tumor
0.4
443
Tumor
0.4
432
Normal
0.3
455
Tumor
0.3
461
Tumor
0.3
434
Normal
0.3
227
Tumor
0.3
545
Tumor
0.3
618
Normal
0.3
421
Tumor
0.3
222
Normal
0.3
344
Normal
0.3
728
Normal
0.3
1022
Normal
0.3
641
Tumor
0.3
573
Tumor
0.3
498
Normal
0.3
1046
Normal
0.3
944
Normal
0.3
212
Normal
0.3
312
Normal
0.3
664
Normal
0.3
332
Normal
0.3
862
Normal
0.3
716
Normal
0.3
868
Normal
0.3
914
Normal
0.3
425
Tumor
0.3
111
Normal
0.3
268
Normal
0.3
574
Normal
0.3
924
Normal
0.3
388
Normal
0.3
465
Tumor
0.3
196
Normal
0.3
1032
Normal
0.2
723
Tumor
0.2
352
Normal
0.2
195
Tumor
0.2
672
Normal
0.2
742
Normal
0.2
744
Normal
0.2
271
Tumor
0.2
448
Normal
0.2
132
Normal
0.2
538
Normal
0.2
975
Tumor
0.2
523
Tumor
0.2
413
Tumor
0.2
356
Normal
0.2
553
Tumor
0.2
426
Normal
0.2
464
Normal
0.2
878
Normal
0.2
572
Normal
0.2
616
Normal
0.2
648
Normal
0.2
1025
Tumor
0.2
864
Normal
0.2
558
Normal
0.2
466
Normal
0.2
342
Normal
0.2
568
Normal
0.2
778
Normal
0.2
146
Normal
0.2
713
Tumor
0.2
363
Tumor
0.2
917
Tumor
0.2
813
Tumor
0.2
456
Normal
0.2
385
Tumor
0.2
138
Normal
0.2
516
Normal
0.2
984
Normal
0.2
816
Normal
0.2
738
Normal
0.2
214
Normal
0.2
952
Normal
0.2
954
Normal
0.2
436
Normal
0.2
478
Normal
0.2
916
Normal
0.2
386
Normal
0.2
695
Tumor
0.2
686
Normal
0.2
536
Normal
0.2
746
Normal
0.2
424
Normal
0.2
362
Normal
0.2
131
Tumor
0.2
518
Normal
0.2
368
Normal
0.2
721
Tumor
0.2
817
Tumor
0.2
384
Normal
0.2
298
Normal
0.2
422
Normal
0.2
1044
Normal
0.2
162
Normal
0.2
284
Normal
0.2
698
Normal
0.2
172
Normal
0.2
484
Normal
0.2
446
Normal
0.2
636
Normal
0.1
964
Normal
0.1
467
Tumor
0.1
218
Normal
0.1
563
Tumor
0.1
314
Normal
0.1
492
Normal
0.1
976
Normal
0.1
1028
Normal
0.1
874
Normal
0.1
262
Normal
0.1
922
Normal
0.1
786
Normal
0.1
1042
Normal
0.1
877
Tumor
0.1
272
Normal
0.1
514
Normal
0.1
528
Normal
0.1
188
Normal
0.1
474
Normal
0.1
142
Normal
0.1
366
Normal
0.1
258
Normal
0.1
128
Normal
0.1
628
Normal
0.1
468
Normal
0.1
412
Normal
0.1
414
Normal
0.1
364
Normal
0.1
186
Normal
0.1
376
Normal
0.1
818
Normal
0.1
217
Tumor
0.1
278
Normal
0.1
1016
Normal
0.1
148
Normal
0.1
866
Normal
0.1
224
Normal
0.1
958
Normal
0.1
756
Normal
0.1
968
Normal
0.1
824
Normal
0.1
938
Normal
0.1
534
Normal
0.1
428
Normal
0.1
564
Normal
0.1
1021
Tumor
0.1
546
Normal
0.1
696
Normal
0.1
416
Normal
0.1
114
Normal
0.1
277
Tumor
0.1
228
Normal
0.1
852
Normal
0.1
394
Normal
0.1
524
Normal
0.1
1014
Normal
0.1
136
Normal
0.1
918
Normal
0.1
912
Normal
0.1
714
Normal
0.1
472
Normal
0.1
462
Normal
0.1
482
Normal
0.1
526
Normal
0.1
926
Normal
0.1
185
Tumor
0.1
966
Normal
0.1
357
Tumor
0.1
978
Normal
0.1
666
Normal
0.1
354
Normal
0.1
452
Normal
0.1
642
Normal
0.1
232
Normal
0.1
124
Normal
0.1
662
Normal
0.1
882
Normal
0.1
488
Normal
0.0
857
Tumor
0.0
873
Tumor
0.0
494
Normal
0.0
328
Normal
0.0
884
Normal
0.0
722
Normal
0.0
213
Tumor
0.0
955
Tumor
0.0
956
Normal
0.0
1026
Normal
0.0
977
Tumor
0.0
392
Normal
0.0
858
Normal
0.0
851
Tumor
0.0
327
Tumor
0.0
957
Tumor
0.0
1043
Tumor
0.0
286
Normal
0.0
125
Tumor
0.0
297
Tumor
0.0
447
Tumor
0.0
1045
Tumor
0.0
191
Tumor
0.0
963
Tumor
0.0
815
Tumor
0.0
982
Normal
0.0
135
Tumor
0.0
863
Tumor
0.0
737
Tumor
0.0
427
Tumor
0.0
223
Tumor
0.0
343
Tumor
0.0
861
Tumor
0.0
943
Tumor
0.0
814
Normal
0.0
1031
Tumor
0.0
358
Normal
0.0
415
Tumor
0.0
571
Tumor
-0.1
433
Tumor
-0.1
867
Tumor
-0.1
383
Tumor
-0.1
823
Tumor
-0.1
341
Tumor
-0.1
483
Tumor
-0.1
755
Tumor
-0.1
331
Tumor
-0.1
535
Tumor
-0.1
145
Tumor
-0.1
311
Tumor
-0.1
355
Tumor
-0.1
147
Tumor
-0.1
487
Tumor
-0.1
554
Normal
-0.1
615
Tumor
-0.1
375
Tumor
-0.1
883
Tumor
-0.1
491
Tumor
-0.1
481
Tumor
-0.1
497
Tumor
-0.1
913
Tumor
-0.1
367
Tumor
-0.2
445
Tumor
-0.2
423
Tumor
-0.2
261
Tumor
-0.2
113
Tumor
-0.2
451
Tumor
-0.2
671
Tumor
-0.2
463
Tumor
-0.2
285
Tumor
-0.2
283
Tumor
-0.2
137
Tumor
-0.2
161
Tumor
-0.2
365
Tumor
-0.2
187
Tumor
-0.2
211
Tumor
-0.2
493
Tumor
-0.2
1041
Tumor
-0.2
967
Tumor
-0.3
353
Tumor
-0.3
525
Tumor
-0.3
647
Tumor
-0.3
937
Tumor
-0.3
557
Tumor
-0.3
951
Tumor
-0.3
745
Tumor
-0.3
1015
Tumor
-0.3
141
Tumor
-0.3
661
Tumor
-0.3
477
Tumor
-0.3
741
Tumor
-0.3
431
Tumor
-0.3
635
Tumor
-0.3
411
Tumor
-0.3
911
Tumor
-0.3
785
Tumor
-0.3
567
Tumor
-0.3
533
Tumor
-0.3
393
Tumor
-0.3
517
Tumor
-0.3
513
Tumor
-0.3
981
Tumor
-0.3
983
Tumor
-0.4
257
Tumor
-0.4
697
Tumor
-0.4
915
Tumor
-0.4
743
Tumor
-0.4
685
Tumor
-0.4
313
Tumor
-0.4
663
Tumor
-0.4
127
Tumor
-0.4
391
Tumor
-0.5
923
Tumor
-0.5
724
Normal
-0.5
715
Tumor
-0.5
231
Tumor
-0.5
953
Tumor
-0.5
925
Tumor
-0.5
387
Tumor
-0.5
435
Tumor
-0.5
351
Tumor
-0.5
727
Tumor
-0.6
665
Tumor
-0.6
865
Tumor
-0.6
473
Tumor
-0.6
515
Tumor
-0.6
171
Tumor
-0.7
267
Tumor
-0.7
1013
Tumor
-0.7
1027
Tumor
-0.7
537
Tumor
-0.8
361
Tumor
-0.9
965
Tumor
-0.9
395
Tumor
-1.0
123
Tumor
-1.1
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.