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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
307.0
nTPM
HPA Brain:
849.8
nTPM
GTEx:
307.0
nTPM
FANTOM5:
650.6
Scaled Tags Per Million
Pig:
475.4
nTPM
Mouse:
810.9
nTPM
Allen mouse:
21.2
Expression energy
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
849.8
Sample id
Sample description
nTPM
Hippocampus nTPM: 606.1
2148
Female, age 91, left hemisphere
823.0
2621
Female, age 67, right hemisphere
732.2
1898
Male, age 80, left hemisphere
609.1
1855
Male, age 76, left hemisphere
567.5
1911
Female, age 85, right hemisphere
486.9
2529
Female, age 94, left hemisphere
417.9
Dentate gyrus nTPM: 742.3
2531
Female, age 67, both hemispheres
1054.0
1927
Female, age 91, both hemispheres
995.6
2528
Male, age 74, both hemispheres
643.5
2530
Female, age 94, left hemisphere
633.8
2010
Male, age 76, both hemispheres
573.1
2246
Female, age 85, both hemispheres
554.0
Entorhinal gyrus nTPM: 407.9
2613
Female, age 94, left hemisphere
533.2
2764
Male, age 80, right hemisphere
440.0
1938
Female, age 85, left hemisphere
430.9
1787
Male, age 76, left hemisphere
366.7
2686
Male, age 75, right hemisphere
365.0
2117
Female, age 91, right hemisphere
311.4
Hippocampus, CA1 nTPM: 736.5
2749
Male, age 80, left hemisphere
1006.8
2045
Male, age 76, both hemispheres
860.9
1873
Female, age 85, both hemispheres
659.0
2082
Female, age 91, right hemisphere
605.8
2527
Male, age 74, both hemispheres
550.3
Hippocampus, CA2 nTPM: 491.3
1963
Male, age 80, left hemisphere
656.2
1892
Male, age 76, both hemispheres
593.9
2113
Female, age 91, right hemisphere
469.2
2437
Female, age 94, left hemisphere
451.1
2249
Male, age 74, both hemispheres
415.8
1940
Female, age 85, left hemisphere
361.6
Hippocampus, CA3 nTPM: 849.8
2620
Female, age 94, left hemisphere
1840.3
2861
Female, age 67, both hemispheres
898.9
2137
Male, age 80, left hemisphere
865.0
1867
Male, age 76, both hemispheres
594.8
1891
Female, age 85, both hemispheres
457.4
2436
Male, age 74, both hemispheres
442.2
Parahippocampal cortex nTPM: 408.6
2245
Female, age 91, both hemispheres
558.4
2693
Female, age 94, both hemispheres
494.4
2250
Female, age 67, right hemisphere
434.6
1990
Female, age 91, right hemisphere
425.7
2018
Male, age 76, both hemispheres
400.6
1933
Female, age 85, both hemispheres
395.8
1850
Male, age 80, both hemispheres
390.8
2622
Female, age 67, right hemisphere
368.5
2532
Female, age 72, left hemisphere
343.9
2692
Male, age 74, both hemispheres
273.8
Perirhinal gyrus nTPM: 508.9
1847
Female, age 91, left hemisphere
618.0
2521
Female, age 94, right hemisphere
575.3
1794
Male, age 80, right hemisphere
530.3
1841
Female, age 85, right hemisphere
443.3
2848
Male, age 76, right hemisphere
377.9
Subiculum nTPM: 402.6
2729
Female, age 91, right hemisphere
553.0
1977
Female, age 85, both hemispheres
460.6
1901
Male, age 80, both hemispheres
437.4
2042
Male, age 76, both hemispheres
347.8
2619
Male, age 74, both hemispheres
310.9
2438
Female, age 94, left hemisphere
305.8
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
307.0
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 307.0
Samples: 197
Max nTPM: 959.8
Min nTPM: 23.4
Std nTPM: 211.6
Median nTPM: 268.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
959.8
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
950.6
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
907.9
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
879.5
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
857.9
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
834.6
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
810.3
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
806.7
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
793.0
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
774.5
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
712.2
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
690.0
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
685.8
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
680.1
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
677.7
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
673.1
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
668.1
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
653.2
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
641.1
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
623.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
622.0
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
567.2
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
565.9
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
560.4
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
551.9
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
550.0
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
549.5
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
537.2
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
523.1
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
516.6
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
514.8
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
500.8
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
498.8
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
497.1
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
492.1
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
490.5
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
479.1
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
477.9
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
476.2
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
473.1
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
469.0
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
467.0
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
463.8
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
462.9
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
458.6
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
454.8
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
449.6
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
442.5
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
435.7
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
429.9
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
422.1
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
421.6
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
405.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
403.9
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
390.7
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
390.2
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
386.1
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
384.6
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
380.1
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
379.9
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
378.5
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
377.5
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
371.8
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
363.4
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
363.2
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
360.2
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
357.7
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
349.9
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
347.5
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
343.8
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
341.9
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
340.7
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
335.5
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
330.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
325.1
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
323.9
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
318.3
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
316.6
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
307.7
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
305.4
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
305.2
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
303.6
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
299.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
298.7
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
297.5
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
295.0
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
288.0
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
285.6
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
285.1
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
284.1
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
284.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
284.0
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
283.0
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
279.8
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
276.7
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
272.7
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
272.4
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
270.1
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
268.3
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
266.3
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
264.8
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
260.3
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
260.0
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
257.1
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
254.8
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
252.3
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
250.8
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
244.8
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
242.9
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
242.6
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
241.9
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
236.5
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
223.0
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
222.3
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
216.5
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
214.0
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
214.0
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
208.7
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
208.3
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
201.6
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
198.9
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
194.8
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
191.2
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
191.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
187.6
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
187.4
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
186.8
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
186.2
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
186.0
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
184.2
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
184.2
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
183.8
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
182.2
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
181.7
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
181.5
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
179.3
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
176.2
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
172.7
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
170.5
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
170.2
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
170.2
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
167.3
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
166.6
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
164.2
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
161.1
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
159.4
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
156.5
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
153.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
149.5
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
148.9
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
143.4
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
136.9
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
126.2
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
125.8
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
123.8
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
123.6
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
120.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
116.7
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
114.8
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
112.8
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
106.2
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
105.0
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
103.9
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
103.0
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
101.5
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
100.2
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
99.6
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
98.0
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
95.9
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
93.7
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
89.6
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
88.9
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
85.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
81.0
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
80.6
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
75.3
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
73.8
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
73.1
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
64.3
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
60.1
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
56.7
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
56.3
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
52.6
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
48.1
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
46.3
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
43.3
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
42.9
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
41.0
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
40.6
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
38.4
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
37.7
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
37.4
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
34.6
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
31.5
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
29.8
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
27.7
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
23.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
810.9
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 419.3
Samples: 4
Max nTPM: 454.5
Min nTPM: 352.2
Sample A
Male
426.1
Sample B
Male
352.2
Sample C
Female
454.5
Sample D
Female
444.2
Hippocampal formation nTPM: 810.9
Samples: 4
Max nTPM: 994.2
Min nTPM: 625.7
Sample A
Male
625.7
Sample B
Male
887.9
Sample C
Female
994.2
Sample D
Female
735.9
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.